Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g082395.1.1
CDS Infomation

RNA-binding protein, putative (AHRD V3.3 *-* B9T1D4_RICCO)
Sequence

ATGGCCGTGGATGAGAATGGCTCCTTGAATCGGACGGACGATAGTGCTGTAAAGAATGAT
TCCGCTGCCGTCGATCAGAACGGTGCGCCACGGTCAACGATACCCAGTGATCAGAATATT
CAAAAGATGTCTGTTGATCATCAGCCCCAGAAAACGAGTGTGCAGCATAAGCCTCAAATG
GGTGTTTTTCAGCAGCAGAAACAAAGCATCAACGGCAATGGGGTGATGGGTCAGCATGAT
TTTCAGACTCAGCATCAGAAAATGAACGGTGTTGATTTGAGAAGAAATGGAGGGGTTGTT
GATGAGGATGAAGATGGGGAAGGGTTTAAGAAGGAGATGAGGGATTTGGAGGAAATGCTT
TCCAAATTGAACCCCATGGCTGAAGAGTTTGTGCCCCCCTCACTCTCCACCAACCACGGA
GTTGTGCCAATTTCTCCTGGTGGAGAACAATTTGGAATTGATGCTTTCAATTTTGTAATG
CAAGCTGGACTCAACGATGGAAATTTCAACAGAAGGAAGAGAAATGGCTATGGTCTTGGT
AGGAGACGGACGAATGTTCGGACAAGCATGGCCCAACGTGAAGATGTTATAAGGAGGACA
GTTTATGTGTCTGAAATTGATCAACAGGTGACTGAAGAGCAACTTGCTACACTCTTTCTT
ACTTGTGGGCAGGTGGTTGACTGTCGCATATGTGGAGACCCCAATTCTGTACTCCGTTTC
GCCTTTATTGAATTTACTGATGAAGAAGGTGCAAGGACCGCTCTGAGTCTTGCCGGAACT
ATGCTAGGGTTTTACCCTGTGAGAGTACTTCCTTCTAAAACTGCAATTGCACCAGTTAAT
CCAACATTTCTTCCAAGGTCTGAAGATGAAAGGGAGATGTGTGCAAGAACTATATACTGT
ACAAACATTGACAAAAAGGTTACTCAAGCTGATGTCAAGCTCTTTTTTGAATACTTTTGT
GGAGAGGTTAAGCGCCTGAGGTTACTTGGTGACTATCATCATACTACTCGTATAGGTTTT
GTCGAGTTTGTTATGGCTGAGAGTGCCATTGCTGCACTGAACTGCAGTGGTGCAATCCTG
GGATCTCTTCCTATAAGGGTGAGCCCATCAAAGACTCCTGTTCGACCACGTGTGGGTGAT
GAGGTTCATGGTGGGGAAGGGTTTAACAGAGAGATGAAGGATTTGGAGGAAATGCTTTCC
AAATTGAACCCCATGGCTGAAGAGTTTAAGAGAAATGGCTATGGTCTTGGTAGGAGAAGG
ATGAATGTCCGGACAAGCATGGCCCAACGTGAAGAGGTTATTAGGAGGACAGTTTATGTG
TCTGACATTGATCACCAGGTGACTGAAGAGCAACTTGCTACACTCTTTCTTACCTGCGGG
CAGGTGGTTGACTGTCGTATCTGTGGAGATCCCAATTCTGTACTCCGTTTTGCATTTATT
GAGTTTACTGATGAAGAAGGCGCAAGGAGTGCTCTGAGTCTTGCAGGAACTATGCTAGGA
TACTACCCTGTGAAAGTGCTTCCCTCTAAAACTGCTATTGCACCAGTTAATCCAACTTTT
CTTCCAAGGTCTGAAGATGAAAGGGAGATGTGTGCAAGAACTATATACTGTACCAACATT
GATAAAAAGGTTACTCAAGCAGATGTCAAGCTCTTTTTTGAGTACTTCTGTGGAGAGGTT
AAGCGCTTGAGGTTGCTTGGTGACTATCATCATTCTACTCGCATAGGTTTTGTTGAGTTT
GTTATGGCCGAGAGTGCCATTGCTGCACTGAACTGCAGTGGTGCAATCCTGGGATCACTC
CCTATAAGAGTAAGCCCATCGAAGACTCCTGTCCGGCCGCGCACTCCCCGCTCGGTGGTG
CAGTAA

Peptide Sequence

PEP ID

Solyc03g082395.1.1
PEP Infomation

RNA-binding protein, putative (AHRD V3.3 *-* B9T1D4_RICCO)
Sequence

MAVDENGSLNRTDDSAVKNDSAAVDQNGAPRSTIPSDQNIQKMSVDHQPQKTSVQHKPQM
GVFQQQKQSINGNGVMGQHDFQTQHQKMNGVDLRRNGGVVDEDEDGEGFKKEMRDLEEML
SKLNPMAEEFVPPSLSTNHGVVPISPGGEQFGIDAFNFVMQAGLNDGNFNRRKRNGYGLG
RRRTNVRTSMAQREDVIRRTVYVSEIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF
AFIEFTDEEGARTALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYC
TNIDKKVTQADVKLFFEYFCGEVKRLRLLGDYHHTTRIGFVEFVMAESAIAALNCSGAIL
GSLPIRVSPSKTPVRPRVGDEVHGGEGFNREMKDLEEMLSKLNPMAEEFKRNGYGLGRRR
MNVRTSMAQREEVIRRTVYVSDIDHQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFI
EFTDEEGARSALSLAGTMLGYYPVKVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNI
DKKVTQADVKLFFEYFCGEVKRLRLLGDYHHSTRIGFVEFVMAESAIAALNCSGAILGSL
PIRVSPSKTPVRPRTPRSVVQ*

Transcript Sequence

Transcript ID

Solyc03g082395.1.1
Transcript Infomation

RNA-binding protein, putative (AHRD V3.3 *-* B9T1D4_RICCO)
Sequence

ATGGCCGTGGATGAGAATGGCTCCTTGAATCGGACGGACGATAGTGCTGTAAAGAATGAT
TCCGCTGCCGTCGATCAGAACGGTGCGCCACGGTCAACGATACCCAGTGATCAGAATATT
CAAAAGATGTCTGTTGATCATCAGCCCCAGAAAACGAGTGTGCAGCATAAGCCTCAAATG
GGTGTTTTTCAGCAGCAGAAACAAAGCATCAACGGCAATGGGGTGATGGGTCAGCATGAT
TTTCAGACTCAGCATCAGAAAATGAACGGTGTTGATTTGAGAAGAAATGGAGGGGTTGTT
GATGAGGATGAAGATGGGGAAGGGTTTAAGAAGGAGATGAGGGATTTGGAGGAAATGCTT
TCCAAATTGAACCCCATGGCTGAAGAGTTTGTGCCCCCCTCACTCTCCACCAACCACGGA
GTTGTGCCAATTTCTCCTGGTGGAGAACAATTTGGAATTGATGCTTTCAATTTTGTAATG
CAAGCTGGACTCAACGATGGAAATTTCAACAGAAGGAAGAGAAATGGCTATGGTCTTGGT
AGGAGACGGACGAATGTTCGGACAAGCATGGCCCAACGTGAAGATGTTATAAGGAGGACA
GTTTATGTGTCTGAAATTGATCAACAGGTGACTGAAGAGCAACTTGCTACACTCTTTCTT
ACTTGTGGGCAGGTGGTTGACTGTCGCATATGTGGAGACCCCAATTCTGTACTCCGTTTC
GCCTTTATTGAATTTACTGATGAAGAAGGTGCAAGGACCGCTCTGAGTCTTGCCGGAACT
ATGCTAGGGTTTTACCCTGTGAGAGTACTTCCTTCTAAAACTGCAATTGCACCAGTTAAT
CCAACATTTCTTCCAAGGTCTGAAGATGAAAGGGAGATGTGTGCAAGAACTATATACTGT
ACAAACATTGACAAAAAGGTTACTCAAGCTGATGTCAAGCTCTTTTTTGAATACTTTTGT
GGAGAGGTTAAGCGCCTGAGGTTACTTGGTGACTATCATCATACTACTCGTATAGGTTTT
GTCGAGTTTGTTATGGCTGAGAGTGCCATTGCTGCACTGAACTGCAGTGGTGCAATCCTG
GGATCTCTTCCTATAAGGGTGAGCCCATCAAAGACTCCTGTTCGACCACGTGTGGGTGAT
GAGGTTCATGGTGGGGAAGGGTTTAACAGAGAGATGAAGGATTTGGAGGAAATGCTTTCC
AAATTGAACCCCATGGCTGAAGAGTTTAAGAGAAATGGCTATGGTCTTGGTAGGAGAAGG
ATGAATGTCCGGACAAGCATGGCCCAACGTGAAGAGGTTATTAGGAGGACAGTTTATGTG
TCTGACATTGATCACCAGGTGACTGAAGAGCAACTTGCTACACTCTTTCTTACCTGCGGG
CAGGTGGTTGACTGTCGTATCTGTGGAGATCCCAATTCTGTACTCCGTTTTGCATTTATT
GAGTTTACTGATGAAGAAGGCGCAAGGAGTGCTCTGAGTCTTGCAGGAACTATGCTAGGA
TACTACCCTGTGAAAGTGCTTCCCTCTAAAACTGCTATTGCACCAGTTAATCCAACTTTT
CTTCCAAGGTCTGAAGATGAAAGGGAGATGTGTGCAAGAACTATATACTGTACCAACATT
GATAAAAAGGTTACTCAAGCAGATGTCAAGCTCTTTTTTGAGTACTTCTGTGGAGAGGTT
AAGCGCTTGAGGTTGCTTGGTGACTATCATCATTCTACTCGCATAGGTTTTGTTGAGTTT
GTTATGGCCGAGAGTGCCATTGCTGCACTGAACTGCAGTGGTGCAATCCTGGGATCACTC
CCTATAAGAGTAAGCCCATCGAAGACTCCTGTCCGGCCGCGCACTCCCCGCTCGGTGGTG
CAGTAA