Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g080060.1.1
CDS Infomation

LOW QUALITY:Clade XV lectin receptor kinase (AHRD V3.3 *** A0A0K1U1X9_SOLLC)
Sequence

ATGGACGGACCTTCAATTAATGTGACGAAGCATATCTCTTTTCGAGATTTCAGTTCTATT
AATCCGAGATTGAAGCAAGATCTTACACTTGTTGGTAGTGTTATCGTCTCGGATGAAAAA
AAATCCGTTCAAATTCCTGATCCTGAGCGAGAAGGTGATGATCTAAAGCATCTAGTAGGA
CGAGCTATATATTCTTCACCTATCCGTTTGTTTGATCCTCAGACTCAAACACCGGCTTCT
TTTGAAACGACTTTCTCGTTTCAATTTGAAGTGAAGTCCTATTCAGGCAATGAGGCGTCA
GATCAGGGGAAATATGTAGGTGGTAGTGGTCTTACTTTTATAATCGTCCCGGATGAATTA
ACTGTTGGCCGTGCTGGTCCGTGGCTTGGGATGCTGAACGATTTGTGCGATGAGGATTAT
AAAACAGTAGCTATTGAGTTTGATACACGGAAGAACCCTGAATTTGGTGACCCAAATGAT
AATCACTTGGGCATTAATTTGGGTAGCATAGTTTCAACTGCAGCGATTAATGCTTCTGAC
GCTGGAGTTCAATTGAATGACGGATCAGTTCACAGAGTTTGGATATCTTACGATGGGCGA
AAGCGATTTGTTGAAATTCGTCTTGCACCTGATGGCAGAGGATATCCTTCTAAACCAGTT
TACTCTGGTTTACTTGATCTTTCACCTTACTTGAATGAGTATATGTTTGTTGGATTTTCA
GCTGCTACTGGAAACCATACACAAATCCACAACATTTTGTCATGGAATTTCACCTCAATT
AGTCAAGCTTCGCTTCGAATTCCTTCAACAGAGACATGCCAGAACAAAATCATGCTTCAA
AATAGCACACAATCTGAAAATGATCATCGGAAAACGCCTAATAGTTTCTTTATTTTCCTT
GCTGTTGTCATTCTTCTGGTAATCGTTCTTATTAACCTCTATTTCAGTAGCTACAAGCGA
GATAGCAATTCTGACGAAGCATTCCCTCTGCCTGAGAAAAAGCAGAGACCACGGCCACCA
AACAAGGCACGCCGCTTCACAATAGCTGAGATCTCCATCGCAACAAGGAATTTCAGCGAG
TTACAAATATTAGGCAGTGATGAGAAGAGCATTACGTATAAGGCCACGATACTAAACGGG
TGCAACGTTGTTGTAAAACGATTTTTAACTCAATTTTTCAACACACACGGGTTTGAAAAG
CGTCAATTTCACAAGGAAATCAAGGCTATCACCAGAATTCGTCACCCGAATTTGGTCCCG
ATTAGAGGTTGGTGCTATGACAACCAAGAAACAATAGTTGTGTACGATTTCATCCCAAAT
GGAAGCCTCGATAAGTGGCTGTTTGGCGTTGGCGTCTTGCCTTGGACGAGGCGTTTTAAG
GTCCTTAAAGATTTAGCAGATTCTCTTGTCTACCTTCATTCAAAGCAACTCGCTCACAAA
AACGTTAAAAGTAGCAGTGTGTTTCTTGACGTGAGCTTCAGAGCAGTAGTTGGTGATTTC
GGGTTTGTGCTTACTTCAGCCGGGTCAACCCGGTTTGAGGCCATGGTGAGTCAGACAGCT
GATGTGTTCGAGTTCGGAGTAGTCGTGCTTGAGATCATTGCGGGTCGGAGCAGGAAGTCC
AACCCGGGAGAACGGGACTTATTGGATCTTGCATGGGCAATGCATGAGGTACAACAGAAG
GAAACTCTAGTGGATCGTAGAATGGGCGCGGTCGTGAACCTGGAGCAGGCGATTCGGGCA
TTGGATATCGGGTTGCTCTGTACGTTGAACGAGAACAAAGGAAGGCCTACTATGGAAGAA
GTGGTGGAGTTCCTAAACATGGAGAAACCGATACCAGAGTTGCCATCGGGTCGACCCGTT
TGTTTGTTCCCGTACAGCAGCACCACAGGCTTATGCAGCGGGTACGCTTGTACAACATTC
AAATGA

Peptide Sequence

PEP ID

Solyc03g080060.1.1
PEP Infomation

LOW QUALITY:Clade XV lectin receptor kinase (AHRD V3.3 *** A0A0K1U1X9_SOLLC)
Sequence

MDGPSINVTKHISFRDFSSINPRLKQDLTLVGSVIVSDEKKSVQIPDPEREGDDLKHLVG
RAIYSSPIRLFDPQTQTPASFETTFSFQFEVKSYSGNEASDQGKYVGGSGLTFIIVPDEL
TVGRAGPWLGMLNDLCDEDYKTVAIEFDTRKNPEFGDPNDNHLGINLGSIVSTAAINASD
AGVQLNDGSVHRVWISYDGRKRFVEIRLAPDGRGYPSKPVYSGLLDLSPYLNEYMFVGFS
AATGNHTQIHNILSWNFTSISQASLRIPSTETCQNKIMLQNSTQSENDHRKTPNSFFIFL
AVVILLVIVLINLYFSSYKRDSNSDEAFPLPEKKQRPRPPNKARRFTIAEISIATRNFSE
LQILGSDEKSITYKATILNGCNVVVKRFLTQFFNTHGFEKRQFHKEIKAITRIRHPNLVP
IRGWCYDNQETIVVYDFIPNGSLDKWLFGVGVLPWTRRFKVLKDLADSLVYLHSKQLAHK
NVKSSSVFLDVSFRAVVGDFGFVLTSAGSTRFEAMVSQTADVFEFGVVVLEIIAGRSRKS
NPGERDLLDLAWAMHEVQQKETLVDRRMGAVVNLEQAIRALDIGLLCTLNENKGRPTMEE
VVEFLNMEKPIPELPSGRPVCLFPYSSTTGLCSGYACTTFK*

Transcript Sequence

Transcript ID

Solyc03g080060.1.1
Transcript Infomation

LOW QUALITY:Clade XV lectin receptor kinase (AHRD V3.3 *** A0A0K1U1X9_SOLLC)
Sequence

ATGGACGGACCTTCAATTAATGTGACGAAGCATATCTCTTTTCGAGATTTCAGTTCTATT
AATCCGAGATTGAAGCAAGATCTTACACTTGTTGGTAGTGTTATCGTCTCGGATGAAAAA
AAATCCGTTCAAATTCCTGATCCTGAGCGAGAAGGTGATGATCTAAAGCATCTAGTAGGA
CGAGCTATATATTCTTCACCTATCCGTTTGTTTGATCCTCAGACTCAAACACCGGCTTCT
TTTGAAACGACTTTCTCGTTTCAATTTGAAGTGAAGTCCTATTCAGGCAATGAGGCGTCA
GATCAGGGGAAATATGTAGGTGGTAGTGGTCTTACTTTTATAATCGTCCCGGATGAATTA
ACTGTTGGCCGTGCTGGTCCGTGGCTTGGGATGCTGAACGATTTGTGCGATGAGGATTAT
AAAACAGTAGCTATTGAGTTTGATACACGGAAGAACCCTGAATTTGGTGACCCAAATGAT
AATCACTTGGGCATTAATTTGGGTAGCATAGTTTCAACTGCAGCGATTAATGCTTCTGAC
GCTGGAGTTCAATTGAATGACGGATCAGTTCACAGAGTTTGGATATCTTACGATGGGCGA
AAGCGATTTGTTGAAATTCGTCTTGCACCTGATGGCAGAGGATATCCTTCTAAACCAGTT
TACTCTGGTTTACTTGATCTTTCACCTTACTTGAATGAGTATATGTTTGTTGGATTTTCA
GCTGCTACTGGAAACCATACACAAATCCACAACATTTTGTCATGGAATTTCACCTCAATT
AGTCAAGCTTCGCTTCGAATTCCTTCAACAGAGACATGCCAGAACAAAATCATGCTTCAA
AATAGCACACAATCTGAAAATGATCATCGGAAAACGCCTAATAGTTTCTTTATTTTCCTT
GCTGTTGTCATTCTTCTGGTAATCGTTCTTATTAACCTCTATTTCAGTAGCTACAAGCGA
GATAGCAATTCTGACGAAGCATTCCCTCTGCCTGAGAAAAAGCAGAGACCACGGCCACCA
AACAAGGCACGCCGCTTCACAATAGCTGAGATCTCCATCGCAACAAGGAATTTCAGCGAG
TTACAAATATTAGGCAGTGATGAGAAGAGCATTACGTATAAGGCCACGATACTAAACGGG
TGCAACGTTGTTGTAAAACGATTTTTAACTCAATTTTTCAACACACACGGGTTTGAAAAG
CGTCAATTTCACAAGGAAATCAAGGCTATCACCAGAATTCGTCACCCGAATTTGGTCCCG
ATTAGAGGTTGGTGCTATGACAACCAAGAAACAATAGTTGTGTACGATTTCATCCCAAAT
GGAAGCCTCGATAAGTGGCTGTTTGGCGTTGGCGTCTTGCCTTGGACGAGGCGTTTTAAG
GTCCTTAAAGATTTAGCAGATTCTCTTGTCTACCTTCATTCAAAGCAACTCGCTCACAAA
AACGTTAAAAGTAGCAGTGTGTTTCTTGACGTGAGCTTCAGAGCAGTAGTTGGTGATTTC
GGGTTTGTGCTTACTTCAGCCGGGTCAACCCGGTTTGAGGCCATGGTGAGTCAGACAGCT
GATGTGTTCGAGTTCGGAGTAGTCGTGCTTGAGATCATTGCGGGTCGGAGCAGGAAGTCC
AACCCGGGAGAACGGGACTTATTGGATCTTGCATGGGCAATGCATGAGGTACAACAGAAG
GAAACTCTAGTGGATCGTAGAATGGGCGCGGTCGTGAACCTGGAGCAGGCGATTCGGGCA
TTGGATATCGGGTTGCTCTGTACGTTGAACGAGAACAAAGGAAGGCCTACTATGGAAGAA
GTGGTGGAGTTCCTAAACATGGAGAAACCGATACCAGAGTTGCCATCGGGTCGACCCGTT
TGTTTGTTCCCGTACAGCAGCACCACAGGCTTATGCAGCGGGTACGCTTGTACAACATTC
AAATGA