Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g079920.3.1
CDS Infomation	WD40 repeat-containing protein (AHRD V3.3 *** A0A103Y9A7_CYNCS)
Sequence	ATGAATTCTACAGATTCGATTAAGACCCTTTTGGCTACTACTGGCGGTGACACTGTTAAG CTTTTTGACCTCACTTTGGAACCCCGTGATCCCTGCATTCTTAGCTATACTCCTTCCCCT GGATTCCAAGTCAATTCCGTCAAGTGGAATCACACTAATTTGGTGGTGGCAAGCGCTGGA GATGACAAGAAGATATCTTTGTGGAGGAAAAATGGACAGAGTTTGGGGACTGTACCACTG GCCGGCACTGATAGTGCTGACAATATCGAGGAGTCTATTTCAACAGTTAACTTTAGCAGC AAAGCATCCCGATACATATGTTCTGGAGGTAGTGGCCAAGTTATACGAATATGGGATTTG CAGCGGAAGCGTTGCATCAAATGGTTGAAAGGTCATACCAATACTATTAGTGGTGCAATG TACAATTGTAAAGATGAGCACTTAGCTTCTATCAGTCTTAATGGGAATCTTATACTTCAC AACCTTGCTTCTGGTGCAAAGGCTGCTGAACTCAAGGATCCAAATGCGCAGGTTTTGAGA GTGCTTGATTATTCTAAGATTAGCAGGCATTTATTGGTGACAGCTGGTGATGATGGATCT ATCCACCTGTGGGATACAACTGGTCGCAGCCCCAAGGTTTCTTGGCTAAAGCAGCATTCT GCACCAACTTCTGGCATTAGTTTCTCACCAACAAACGACAAGATTGTTGCTAGTGTTGGT ATGGATAAGAAGTTGTACACTTTTGACTCAGGGTCAAGAAGGCCGACATTTTGCATTCCT TACGAGGCACCTTTTTCTTCACTGGCATTTACTGATGACGGATTCACTCTGGCAGCTGGA ACAAGTAGTGGCCGGGTAGTATTCTATGACGTTCGTGGAAAACCACAACCCTTGACTGTT TTACGTGCTTATGGAAATTCTGAGGCTGTGACAAGTCTATGCTGGCAAAGAGCAAAACCT GTAATTGTCAATGAAAACAATTGCACTACAGAAATGGCTCTCCTGGGCAGTGCTGTGGAG GATTCAATTTTGATGCCTGACCCACTTCCTGCTATGATGTCATCAAGCCTAGCAACTTCT ATGACAACATCAGGTTCGAGAACCACTGTTCGTTCAGGTTCTGTGGACTCATTTTCTTTT CCAGCAGGCATTACAGGATCTACATCTGGGACAACAGGTTTATCTCCATCCGAGGAAACA CCCATACGAAGTAGTTTATGGAAAGGTGGATCTTTGGCAAGATTACATGCTCCTCGTAAC TTCAAGGATGATATGGAAGTTTTTTCTCCTCTTGTTGAAGTTCAGCCAATTACACCTTCA CTTGATAAGTTGTGGGATGATCAGGAAGGTTTCAAAAAGGATTTTGATAAGAAGTCATCT TTGCTATTTCCTTCTTCTCTAAGGTTTCCCCTTCCAGTTGAGGGTGGCAATGAGAATCGC CCCATATTTGATTGGAAATCAAGTTCCTTACCCAAACAGCAGGAGGATGCTTCTTTTGCA CAGTTGTCTTCCACTCCAACATCTTCTCGTGGTGATGATTCTTCCTCCATAACTCCTCCA GAAGCTTGGGGTGGTGAGAGATTATCGGATAGATTATCTCATCTTCGGCAGTCAGGAAAT ATGCCTTCCCGTTTTGCAATCTCGACATCTGGTCCTCTTGCACCAGGATCTATGTTATCT GGATTACAGGATAATTTTCCTGCAACTCAGAGTATCGGCTCTTTGACTAGTTCTACTCTA AGTTTGGCTAATTTGCGCATAAAAGAAAATCCAAATGAAGAAACTATTCTAGGATCTTCA GAACATGCGAGTTCCACATCCTTTTCAGTTGGAACAAAAGGCATTACTGGGCAGGGTACT CTTGATACTCTTGGTTCAACTGTATCCCTCCCACGAAGATTTTCCAGTTATGCTGAGAGA ATAAGCACTACACCATCCTTCAGTGATGGAACCCTTTCTGTTGGTTCTCCAAAAACTAAG AAAACTGGAGCTGAAACAAGGGAAGAGCTTCTGAATAGCTTGTTATCTAGGTCGGACACG TCGTCTGCTACAGCAGCTGGTGCTTTCCAAGCAATAAATGGTGAAATTAAGCAATCTCAA AAGTCCACACTGCCTGAATTGCAGCAGGGAAGTTCCTTTACACTCCAGCTGTTCCAACGT ACACAAGAAGAAACTCTTTCTTCCCTTCAAAAATCCATTCACGAGGATATGAGGAATCTT CACTTAGATATCTTAAGACAATTTCATATGCAAGAGATGGAAACTTCTAGTGCTATGAAA TTGATACTGGAAAACCAAGCAGAGCTGATGAAAGAGGTTCAATTACTTCGAAGGGAAACA CAGCAGCTTCGACAGTTATTATGA

Peptide Sequence

PEP ID	Solyc03g079920.3.1
PEP Infomation	WD40 repeat-containing protein (AHRD V3.3 *** A0A103Y9A7_CYNCS)
Sequence	MNSTDSIKTLLATTGGDTVKLFDLTLEPRDPCILSYTPSPGFQVNSVKWNHTNLVVASAG DDKKISLWRKNGQSLGTVPLAGTDSADNIEESISTVNFSSKASRYICSGGSGQVIRIWDL QRKRCIKWLKGHTNTISGAMYNCKDEHLASISLNGNLILHNLASGAKAAELKDPNAQVLR VLDYSKISRHLLVTAGDDGSIHLWDTTGRSPKVSWLKQHSAPTSGISFSPTNDKIVASVG MDKKLYTFDSGSRRPTFCIPYEAPFSSLAFTDDGFTLAAGTSSGRVVFYDVRGKPQPLTV LRAYGNSEAVTSLCWQRAKPVIVNENNCTTEMALLGSAVEDSILMPDPLPAMMSSSLATS MTTSGSRTTVRSGSVDSFSFPAGITGSTSGTTGLSPSEETPIRSSLWKGGSLARLHAPRN FKDDMEVFSPLVEVQPITPSLDKLWDDQEGFKKDFDKKSSLLFPSSLRFPLPVEGGNENR PIFDWKSSSLPKQQEDASFAQLSSTPTSSRGDDSSSITPPEAWGGERLSDRLSHLRQSGN MPSRFAISTSGPLAPGSMLSGLQDNFPATQSIGSLTSSTLSLANLRIKENPNEETILGSS EHASSTSFSVGTKGITGQGTLDTLGSTVSLPRRFSSYAERISTTPSFSDGTLSVGSPKTK KTGAETREELLNSLLSRSDTSSATAAGAFQAINGEIKQSQKSTLPELQQGSSFTLQLFQR TQEETLSSLQKSIHEDMRNLHLDILRQFHMQEMETSSAMKLILENQAELMKEVQLLRRET QQLRQLL*

Transcript Sequence

Transcript ID	Solyc03g079920.3.1
Transcript Infomation	WD40 repeat-containing protein (AHRD V3.3 *** A0A103Y9A7_CYNCS)
Sequence	GAATGTAGTAAATGAAGCGAGAGATCTCGAGCTCAATTTCTAAATATAGAAAAACCTTTC CTAAAAAAATTTCGGCCAAAAAAAAAAAAGTTGCATCTGAAGCCTGGTTGATGGCACTTG AGAGAGGGCGCCCACTTTTTGGGCCAGCACTTTTTTTGAATTTGCAATCCCCTCTCTCTC TCCGGTAGGGTTTCAAATCAAACACCTAAATTACACCCCACTTCACTCTTCTCTCTCTTT CCCTTCTTCTGAAATTCAAATCTGTAAACTGTATATTTCACAATCCAAGAATCTCTTCAT AGATGAATTCTACAGATTCGATTAAGACCCTTTTGGCTACTACTGGCGGTGACACTGTTA AGCTTTTTGACCTCACTTTGGAACCCCGTGATCCCTGCATTCTTAGCTATACTCCTTCCC CTGGATTCCAAGTCAATTCCGTCAAGTGGAATCACACTAATTTGGTGGTGGCAAGCGCTG GAGATGACAAGAAGATATCTTTGTGGAGGAAAAATGGACAGAGTTTGGGGACTGTACCAC TGGCCGGCACTGATAGTGCTGACAATATCGAGGAGTCTATTTCAACAGTTAACTTTAGCA GCAAAGCATCCCGATACATATGTTCTGGAGGTAGTGGCCAAGTTATACGAATATGGGATT TGCAGCGGAAGCGTTGCATCAAATGGTTGAAAGGTCATACCAATACTATTAGTGGTGCAA TGTACAATTGTAAAGATGAGCACTTAGCTTCTATCAGTCTTAATGGGAATCTTATACTTC ACAACCTTGCTTCTGGTGCAAAGGCTGCTGAACTCAAGGATCCAAATGCGCAGGTTTTGA GAGTGCTTGATTATTCTAAGATTAGCAGGCATTTATTGGTGACAGCTGGTGATGATGGAT CTATCCACCTGTGGGATACAACTGGTCGCAGCCCCAAGGTTTCTTGGCTAAAGCAGCATT CTGCACCAACTTCTGGCATTAGTTTCTCACCAACAAACGACAAGATTGTTGCTAGTGTTG GTATGGATAAGAAGTTGTACACTTTTGACTCAGGGTCAAGAAGGCCGACATTTTGCATTC CTTACGAGGCACCTTTTTCTTCACTGGCATTTACTGATGACGGATTCACTCTGGCAGCTG GAACAAGTAGTGGCCGGGTAGTATTCTATGACGTTCGTGGAAAACCACAACCCTTGACTG TTTTACGTGCTTATGGAAATTCTGAGGCTGTGACAAGTCTATGCTGGCAAAGAGCAAAAC CTGTAATTGTCAATGAAAACAATTGCACTACAGAAATGGCTCTCCTGGGCAGTGCTGTGG AGGATTCAATTTTGATGCCTGACCCACTTCCTGCTATGATGTCATCAAGCCTAGCAACTT CTATGACAACATCAGGTTCGAGAACCACTGTTCGTTCAGGTTCTGTGGACTCATTTTCTT TTCCAGCAGGCATTACAGGATCTACATCTGGGACAACAGGTTTATCTCCATCCGAGGAAA CACCCATACGAAGTAGTTTATGGAAAGGTGGATCTTTGGCAAGATTACATGCTCCTCGTA ACTTCAAGGATGATATGGAAGTTTTTTCTCCTCTTGTTGAAGTTCAGCCAATTACACCTT CACTTGATAAGTTGTGGGATGATCAGGAAGGTTTCAAAAAGGATTTTGATAAGAAGTCAT CTTTGCTATTTCCTTCTTCTCTAAGGTTTCCCCTTCCAGTTGAGGGTGGCAATGAGAATC GCCCCATATTTGATTGGAAATCAAGTTCCTTACCCAAACAGCAGGAGGATGCTTCTTTTG CACAGTTGTCTTCCACTCCAACATCTTCTCGTGGTGATGATTCTTCCTCCATAACTCCTC CAGAAGCTTGGGGTGGTGAGAGATTATCGGATAGATTATCTCATCTTCGGCAGTCAGGAA ATATGCCTTCCCGTTTTGCAATCTCGACATCTGGTCCTCTTGCACCAGGATCTATGTTAT CTGGATTACAGGATAATTTTCCTGCAACTCAGAGTATCGGCTCTTTGACTAGTTCTACTC TAAGTTTGGCTAATTTGCGCATAAAAGAAAATCCAAATGAAGAAACTATTCTAGGATCTT CAGAACATGCGAGTTCCACATCCTTTTCAGTTGGAACAAAAGGCATTACTGGGCAGGGTA CTCTTGATACTCTTGGTTCAACTGTATCCCTCCCACGAAGATTTTCCAGTTATGCTGAGA GAATAAGCACTACACCATCCTTCAGTGATGGAACCCTTTCTGTTGGTTCTCCAAAAACTA AGAAAACTGGAGCTGAAACAAGGGAAGAGCTTCTGAATAGCTTGTTATCTAGGTCGGACA CGTCGTCTGCTACAGCAGCTGGTGCTTTCCAAGCAATAAATGGTGAAATTAAGCAATCTC AAAAGTCCACACTGCCTGAATTGCAGCAGGGAAGTTCCTTTACACTCCAGCTGTTCCAAC GTACACAAGAAGAAACTCTTTCTTCCCTTCAAAAATCCATTCACGAGGATATGAGGAATC TTCACTTAGATATCTTAAGACAATTTCATATGCAAGAGATGGAAACTTCTAGTGCTATGA AATTGATACTGGAAAACCAAGCAGAGCTGATGAAAGAGGTTCAATTACTTCGAAGGGAAA CACAGCAGCTTCGACAGTTATTATGACCAGACTAGCTAAAAGTCTTGTCATTACGTATTC TTTTAGTTTTAGCCATGTACGCAATGCTGTTTTAGGAGATTTGTACTGACAGTTGTGTAG TGAGTAGCGAGTGCGGAAGTGTTATTGTGTGTTTATCTAATTGTGGGCGAATTTGGGGGT TTATTTTACCCTAATATAGTAAAGGAGTGTGTGATGGCTGATCAATAACAGTTAAGAGTG CTGTTATGGTTGTGTACAGAAAGTTGGCTAGGCCAATTTCAGAAATTTAATGTACAGAAC TACAGATCATCTAATTCACTTTGATTTAAAAAACATCCTTCCAAGTTGGAGGAGGGTGCT CGAAGTGGGAGCAAATAAACAGAGCTTTGGAATCCTTATAACTCTTCAACAAAAGAGTGA TGCAGAGGCAGCATCATCATCATAGCACAAGAAGAGTAATACACCACAATCGAGGATCCA CTTAGACACAAATGAATATGCAAGCCAATACATGTTTGAGAAATCATTGTTAAGCGAAAG CAATATCATGCGCAAAGTGATTTGACTTGACAATAACAATGGAAATGCAATCTCATCAAC AAGCAACAACCTGCTGCTGCAAGTGCAAACAGAACTAGCTGATAAAAGCGAGGGCTAACT CTTATGTATAAATAAAATTCACCAACATTCTATTTTAAGTGGCCATGGTACATCTATAGC AAAAATAAAAAAAAACACTAAAAATCACGGTATTTTGACATCATTGACAGACATTACGAA GTAGCTAGCCCCTACTAAAACATCAATCAAAACTTATGGAACCTATGCCTCGATGAATTT CTTCAGATTCTTAAGCCACATCTTGTATTCTCTGCTATCCTTGTTGACCATGTACTCATG CAAGAAGTTGGTTGTGCTGGGCTTGATACCCCTAATCTCCAGATACTTGTGGAAAGCCTT TTGGAGGTTCTCATCCAAATCCCTGATGATTATATATATATTCTATATTAGTAATTAATG AAAAACAGATAAGAAATTTGTTAAATTAAACATCAAGACTCACGTGAAATCAGGTCCTTC ATAAGCAATCTGATCCTCAGCAACATTAGGATCTTTGATTGACAAAGTGTCAATAGCAAT CTCATCAGCAAAAGCTGTGATACCAAACTCCAAAGCAGGTCCATTTCTCTTAGACACCCT AACAACTAGAGGAATATTGGACTGATTGGACCCTTCGTCATCATCCTCACCACCGTTGTC ATTCTCATCTTCATCACCGGTAACAAGGTCAGGCATGTGAACTTCCACATTTATAGATTC ACCTTGATATTCTCTTGTCAATGTAATAGTTTGTTGTCCAGGATGATCTTCAATCTTGAA GGGGAAACCCTCAGGAGCCTCCTCAACCTGCAATCACAATGAAAAAACAGTACAAAATCT GCTAATCCAGTAACATATATATTTTTTTGATTAAAACTAAAAACAGCATGAATTTTCCAT AAAATCCACCTAAAAACAGAAACAAATCAGTGGTAGAATCCATAATTAGGCGATTTTAAT TAATAGTATTAAAATTCATCTGCGACATGAAAAAGAGAATTGGGGAAAATCAAACCTCGT CTTGTTCGTCGGATTCCTCGGCACATTGGATTTCGGACTGAATGACTTTGAGGAGTGATT CATCAGAACTGGGCCTCTTGGTAGAATAGAAATGAAGGGTGGACGGTGCTGAGCTCCGAA AGAAGTTTCTAGAAGCAGCACTACGGTTAACTATGGTGGATAAGAGAGCAGAGGATCGAT GATGGTAACTCTGTGTTCTAAAGATCACCCGAGCAGCCAAGGGTACAACTTGAGAAGCAG TCCTT