Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g070440.3.1
CDS Infomation

COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)
Sequence

ATGGTACTTAATTTTTGTTGTATATGTTGTAAGAATTCAGTAATTAGTATGTGGATGAAT
GTTTCAGCTGCTTATGATCCATTGGATCCCAATGGGAATATAACTATTAAATGGGATGTC
ATGTCTTGGACTCCTGATGGCTATGTTGCTGTGGTAACGATGAACAACTTCCAAATGTAC
CGACACATTATGAGCCCTGGGTGGACATTAGGGTGGACATGGGCGAAGAAAGAAGTGATA
TGGACTATGATTGGTGCTCAAGCTACAGAACAAGGTGATTGCTCGAAATTCAAAGGAAAT
ATTCCGCATTGTTGCAAGAAGACTCCCACTGTTGTAGATATGCTCCCTGGAGTACCTTAT
AACCAACAATTTACTAATTGTTGTAAAGGTGGAGTTTTGGCTTCTTGGGGCCAAGATCCT
CAATCTTCCGTCTCTGCTTTTCAAGTTAGTGTTGGTCAAGCTGGTACCACAAACAAGACT
GTAAAACTCCCCAAGAACTTCACTTTGCTTGGACCTGGACCAGGTTACACTTGTAGTCCT
GCAAAGATTGTCCCGCCAACCAAATTCTTCACACCTGATCTAAGAAGAAAAACTCAAGCA
CTCATGACATGGAATTTAACATGCACATACTCTCAGTTTGTAGCTCAAAAACATCCAAGA
TGTTGTGTCTCCCTCTCAACTTTCTACAATGAAACCATTACTTCTTGTCCTTCTTGTGCT
TGCGGTTGTGAGAACAAACACAAATGCATCAAGAGCGATTCCAAGCTACTCAGTATGGTG
GGGGTAAACACTCCACGAAAAGACAATGCACCATTACTACAGTGCACCCAACATATGTGC
CCCGTTAGAATCCATTGGCATGTGAAACTCAACTATAAGGAATATTGGAGAGTCAAGATT
ACTGTTACCAACTTCAATTACAGGGTCAATTACACACAGTGGACTCTTGTTGCTCAACAT
CCAAATCTTAACAATGTAACTCAAGTTTTTAGCTTTGATTACAAGCCTCTTGTTCCATAT
CAATCAATAAATGACACAGGTATGTTCTACGGTATGAAGTTCTACAATGACTTACTTATG
GAAGCAGGGCCAGCTGGAAATGTTCAATCAGAAGTTCTTCTCCAGAAAAATAAGGATACT
TTTACCCTTAAACAAGGATGGGCATTTCCTCGAAAAGTATACTTCAATGGCGATGAGTGC
ATGCTACCACCACCAGATAGTTATCCATATTTACCCAATTTTGCCCACCAGAATCTGGAT
GCTTTTTCAACATTGTTTCGTTCTATGCTTTTGATTTTACTTGTTCTGTTTTGA

Peptide Sequence

PEP ID

Solyc03g070440.3.1
PEP Infomation

COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)
Sequence

MVLNFCCICCKNSVISMWMNVSAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMNNFQMY
RHIMSPGWTLGWTWAKKEVIWTMIGAQATEQGDCSKFKGNIPHCCKKTPTVVDMLPGVPY
NQQFTNCCKGGVLASWGQDPQSSVSAFQVSVGQAGTTNKTVKLPKNFTLLGPGPGYTCSP
AKIVPPTKFFTPDLRRKTQALMTWNLTCTYSQFVAQKHPRCCVSLSTFYNETITSCPSCA
CGCENKHKCIKSDSKLLSMVGVNTPRKDNAPLLQCTQHMCPVRIHWHVKLNYKEYWRVKI
TVTNFNYRVNYTQWTLVAQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFYGMKFYNDLLM
EAGPAGNVQSEVLLQKNKDTFTLKQGWAFPRKVYFNGDECMLPPPDSYPYLPNFAHQNLD
AFSTLFRSMLLILLVLF*

Transcript Sequence

Transcript ID

Solyc03g070440.3.1
Transcript Infomation

COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)
Sequence

CATGCATACAAATAAACAAAAGAAACAATTACTAAGAAAGCAAACCTAATAGAGGTAACA
CTACTAAAATATCATTATTTTCTCATAGAAAGATTTTCCATGGCTATTTCCATAAATATT
TATGGAAATAGTAATTGTTTCATTTGGAAAAATTTGAAAGAATAATTTGTTTTCCATCAT
ATATTTTCTTGGTGAGCTAATTGAATGGAAAATGTGTGAAAAATCATATTCTATAGCATA
AATTGTTGGGTTTTAAAATAAATTTTCTCAGGCTTTTGTTTCTAGTAGTAGTGTATAAAT
GTGAGATTAACTTTAACAGTTGCTTAGGATGATAACCCAATGATTTTGTTATAAAAGTTA
AAACAATATTCATGTTTGTTACTATGTCATTTATCAAAGTGTCATCTTACTTTCACAGGA
GAAATGTTACAGTCAAGTTTGAGGCAGAAAAATAGGAAGACTCACCAAATCTTTGCTTTA
AGATTCAGAAAGGCCAACAACAATATAAAACAGAGTCCTATGAAGAAAAGGAGATGTACA
GAGACAACAAACTTTATATATATATATTTTATATTATTTTTATTGTACCAACTAACCAGT
TGGTTAATCCCCATATTTCAAAGTTTTATTAATTGAACATCTTTGAGGCCAATATTCTAA
AGAAAAATAATGAGGATTTATTTGATCACTCTAATTGGCCTTTTGTTTGGTTATGCAGGT
TAACTTGTAGTTTTATAGATTCAATAATTGTATTCATGGTACTTAATTTTTGTTGTATAT
GTTGTAAGAATTCAGTAATTAGTATGTGGATGAATGTTTCAGCTGCTTATGATCCATTGG
ATCCCAATGGGAATATAACTATTAAATGGGATGTCATGTCTTGGACTCCTGATGGCTATG
TTGCTGTGGTAACGATGAACAACTTCCAAATGTACCGACACATTATGAGCCCTGGGTGGA
CATTAGGGTGGACATGGGCGAAGAAAGAAGTGATATGGACTATGATTGGTGCTCAAGCTA
CAGAACAAGGTGATTGCTCGAAATTCAAAGGAAATATTCCGCATTGTTGCAAGAAGACTC
CCACTGTTGTAGATATGCTCCCTGGAGTACCTTATAACCAACAATTTACTAATTGTTGTA
AAGGTGGAGTTTTGGCTTCTTGGGGCCAAGATCCTCAATCTTCCGTCTCTGCTTTTCAAG
TTAGTGTTGGTCAAGCTGGTACCACAAACAAGACTGTAAAACTCCCCAAGAACTTCACTT
TGCTTGGACCTGGACCAGGTTACACTTGTAGTCCTGCAAAGATTGTCCCGCCAACCAAAT
TCTTCACACCTGATCTAAGAAGAAAAACTCAAGCACTCATGACATGGAATTTAACATGCA
CATACTCTCAGTTTGTAGCTCAAAAACATCCAAGATGTTGTGTCTCCCTCTCAACTTTCT
ACAATGAAACCATTACTTCTTGTCCTTCTTGTGCTTGCGGTTGTGAGAACAAACACAAAT
GCATCAAGAGCGATTCCAAGCTACTCAGTATGGTGGGGGTAAACACTCCACGAAAAGACA
ATGCACCATTACTACAGTGCACCCAACATATGTGCCCCGTTAGAATCCATTGGCATGTGA
AACTCAACTATAAGGAATATTGGAGAGTCAAGATTACTGTTACCAACTTCAATTACAGGG
TCAATTACACACAGTGGACTCTTGTTGCTCAACATCCAAATCTTAACAATGTAACTCAAG
TTTTTAGCTTTGATTACAAGCCTCTTGTTCCATATCAATCAATAAATGACACAGGTATGT
TCTACGGTATGAAGTTCTACAATGACTTACTTATGGAAGCAGGGCCAGCTGGAAATGTTC
AATCAGAAGTTCTTCTCCAGAAAAATAAGGATACTTTTACCCTTAAACAAGGATGGGCAT
TTCCTCGAAAAGTATACTTCAATGGCGATGAGTGCATGCTACCACCACCAGATAGTTATC
CATATTTACCCAATTTTGCCCACCAGAATCTGGATGCTTTTTCAACATTGTTTCGTTCTA
TGCTTTTGATTTTACTTGTTCTGTTTTGATCATTTCACTAGTTTGTGAACAAGTAAAAAT
TTTGAAGCCAAGCAACCATTTCAGTAGTATCGGTAATACACGTACTTGAAAAGTCTTTGA
TAGAAGAAAGATTTCATCAACTTTTATTACTGCAATCTAGAGTATTTGAGCATGCAGGTT
CATGACAAGCAGTACAAATATATTAAAAACTTTGTTAATGTCAGTTCAATGGTCCCGGAA
TTCCAGAAACTGCTTAAATCAAATACTTCATAAGACATTGCAAAATGTTGTATATAACAA
AAAAATCACGAGAGAAATTGAAGAATGATCATCTCAATTTGTTGATTCAATACATACGAT
TACATTGGTATTTTATACACAATAGAAATAAGAGATAAAAGGAAGCAAATTATTGTACAG
TTTATGTTAGTCCTACCAAACATTCTATGTAATATTCTCTAGTTACTGCTATACAATATT
CTGAG