Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g059260.3.1
CDS Infomation

Carboxyl-terminal-processing protease (AHRD V3.3 *** A0A151QQ57_CAJCA)
Sequence

ATGGAAACTTTGTGCTCAAATATTAATGTTGGATCATCCATCTCCAAACCATCATTTTGT
TATAGATTTCCATCCTTGACACATAGAAGAGGGGCTGCTTGTAGGAGAAAGGAGCTTATT
CCTATTTCACTGGTGGGAGAGAATGATCAAAATTTGGTGAAATGTATAGGCAAAGGAGTT
ATTGGATTAGCTGCTGCTACTGTGCTGTCATTCTCCTCTTATTCTCCAGCTTTCGCTCAG
TCTTTAACTGTAGCATTCCCTGTCTCTCACACACCTGAGGTAAATACAGTTCAGAGGACC
TTAATTGAGGCTTGGAGTTTGATTAGAGAGACATTCGTAGATCCAACTTTCAATCATCAA
GCTAGCAACCTAACTGTTTGTGGAACATATCTCATAGATTGGGATTTGAAACTGCAACAA
ACCATGGTAGAAATGTTTCCATTGAGATCAGAAGATGCTGCCTATAGCAAAGTAAGGGGA
ATGCTATCTACACTTGGAGATCCCTATACACGCATTATTAGTCCTAAGGAATATCAAAGT
TTTAGAATAGGAAGTGATGGAAATTTACAAGGTGTTGGCCTCTTTGTCAGTGTTGAACCA
AATACAGGCCACCTGGTTGTTTTGTCCTGTGTGGAGAATAGCCCAGCTGCGCGTGCTGGC
ATTCATGAAGGAGATGAATTGCTTGAGATAAATGGTGAGAGGCTTGATGGAGTTGACAGT
GAAACAGCAGCTCAAAAACTGAGGGGCCGCGCTGGTACAACTGTTACAGTCAAAGTTCAC
AGAGATATTGGTGCAGGAGTATCCAGTTATCAAGAGGTTAAACTACCTCGCGAAGTGATT
AAGCTTTCACCAGTATCCAGTACCATCATCCCTCACAAAATGCCTGATGGTCGTCTCTTA
AAAACTGGATATGTAAAGTTGTCAAGCTTCTCTCAGTCTGCTGCTATGGAAATGGAAAAC
ACAATTCAGGATATGGAAAATCAGGGTGTGGAATCATATATACTAGATCTTCGAAATAAT
CCTGGAGGTCTCGTTACGGCTGGGTTAGATGTTGCCCAGATATGGCTAGATGGTGATGAG
ACACTTGTGAACACTGTTGATAGGGATGGAAACATGGCACCAATTAGCATGGTCAACGGA
CATGCTGTAACACACGATCCACTTGTCGTCCTTGTGAATGAGGGAAGTGCAAGTGCTAGT
GAGATTCTGGCTGGAGCACTCCATGATAATGGTCGTGCAATCCTTGTCGGGCATAAGACT
TTTGGGAAAGGAAAGATACAGAGTGTTACACAGTTGCACGATGGATCGGCTCTATTTGTT
ACAGTAGCCAAGTATTTGTCTCCAGCACTTCACGACATCGATCAAGTGGGAATAACACCT
GATGTTCAGTGTACAGTTGAGATGCTTAATTCAGGCAAAGACACCTTTAAGGAAAGGAAG
ACATCCTCATCGTCTTTAGAGGCTGATTCTTGCATCATGGTTGCTGAACATGAATTGGAT
ATTCAAGAATCAAAAGGTTCTGCTTCTTGA

Peptide Sequence

PEP ID

Solyc03g059260.3.1
PEP Infomation

Carboxyl-terminal-processing protease (AHRD V3.3 *** A0A151QQ57_CAJCA)
Sequence

METLCSNINVGSSISKPSFCYRFPSLTHRRGAACRRKELIPISLVGENDQNLVKCIGKGV
IGLAAATVLSFSSYSPAFAQSLTVAFPVSHTPEVNTVQRTLIEAWSLIRETFVDPTFNHQ
ASNLTVCGTYLIDWDLKLQQTMVEMFPLRSEDAAYSKVRGMLSTLGDPYTRIISPKEYQS
FRIGSDGNLQGVGLFVSVEPNTGHLVVLSCVENSPAARAGIHEGDELLEINGERLDGVDS
ETAAQKLRGRAGTTVTVKVHRDIGAGVSSYQEVKLPREVIKLSPVSSTIIPHKMPDGRLL
KTGYVKLSSFSQSAAMEMENTIQDMENQGVESYILDLRNNPGGLVTAGLDVAQIWLDGDE
TLVNTVDRDGNMAPISMVNGHAVTHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKT
FGKGKIQSVTQLHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTVEMLNSGKDTFKERK
TSSSSLEADSCIMVAEHELDIQESKGSAS*

Transcript Sequence

Transcript ID

Solyc03g059260.3.1
Transcript Infomation

Carboxyl-terminal-processing protease (AHRD V3.3 *** A0A151QQ57_CAJCA)
Sequence

CGTAAAGGAATCTTATTAAATTGAGTATATATAGTTAGTATGGGTTGAATTGTTTGAACA
ATATAAAAGAGTTATTATTGGTCCAACTTGTGAGGTGAAGATGAATTGGTACAGAGATAC
TCGGTTACGCAACTAAGTTAACGACCACAAAACTAATAGATTCATATAGACCCACTAGGA
ACCCCAACACGGCAGTTTCGTCCTGCTAGTATTATTTATTAGTATAGTATTAGTAAATTA
GTAAGAAGAAATAATTAATTCGTTCAAATTAAAGATGGAAACTTTGTGCTCAAATATTAA
TGTTGGATCATCCATCTCCAAACCATCATTTTGTTATAGATTTCCATCCTTGACACATAG
AAGAGGGGCTGCTTGTAGGAGAAAGGAGCTTATTCCTATTTCACTGGTGGGAGAGAATGA
TCAAAATTTGGTGAAATGTATAGGCAAAGGAGTTATTGGATTAGCTGCTGCTACTGTGCT
GTCATTCTCCTCTTATTCTCCAGCTTTCGCTCAGTCTTTAACTGTAGCATTCCCTGTCTC
TCACACACCTGAGGTAAATACAGTTCAGAGGACCTTAATTGAGGCTTGGAGTTTGATTAG
AGAGACATTCGTAGATCCAACTTTCAATCATCAAGCTAGCAACCTAACTGTTTGTGGAAC
ATATCTCATAGATTGGGATTTGAAACTGCAACAAACCATGGTAGAAATGTTTCCATTGAG
ATCAGAAGATGCTGCCTATAGCAAAGTAAGGGGAATGCTATCTACACTTGGAGATCCCTA
TACACGCATTATTAGTCCTAAGGAATATCAAAGTTTTAGAATAGGAAGTGATGGAAATTT
ACAAGGTGTTGGCCTCTTTGTCAGTGTTGAACCAAATACAGGCCACCTGGTTGTTTTGTC
CTGTGTGGAGAATAGCCCAGCTGCGCGTGCTGGCATTCATGAAGGAGATGAATTGCTTGA
GATAAATGGTGAGAGGCTTGATGGAGTTGACAGTGAAACAGCAGCTCAAAAACTGAGGGG
CCGCGCTGGTACAACTGTTACAGTCAAAGTTCACAGAGATATTGGTGCAGGAGTATCCAG
TTATCAAGAGGTTAAACTACCTCGCGAAGTGATTAAGCTTTCACCAGTATCCAGTACCAT
CATCCCTCACAAAATGCCTGATGGTCGTCTCTTAAAAACTGGATATGTAAAGTTGTCAAG
CTTCTCTCAGTCTGCTGCTATGGAAATGGAAAACACAATTCAGGATATGGAAAATCAGGG
TGTGGAATCATATATACTAGATCTTCGAAATAATCCTGGAGGTCTCGTTACGGCTGGGTT
AGATGTTGCCCAGATATGGCTAGATGGTGATGAGACACTTGTGAACACTGTTGATAGGGA
TGGAAACATGGCACCAATTAGCATGGTCAACGGACATGCTGTAACACACGATCCACTTGT
CGTCCTTGTGAATGAGGGAAGTGCAAGTGCTAGTGAGATTCTGGCTGGAGCACTCCATGA
TAATGGTCGTGCAATCCTTGTCGGGCATAAGACTTTTGGGAAAGGAAAGATACAGAGTGT
TACACAGTTGCACGATGGATCGGCTCTATTTGTTACAGTAGCCAAGTATTTGTCTCCAGC
ACTTCACGACATCGATCAAGTGGGAATAACACCTGATGTTCAGTGTACAGTTGAGATGCT
TAATTCAGGCAAAGACACCTTTAAGGAAAGGAAGACATCCTCATCGTCTTTAGAGGCTGA
TTCTTGCATCATGGTTGCTGAACATGAATTGGATATTCAAGAATCAAAAGGTTCTGCTTC
TTGACTAGTTAGCATAGGAGATTCAAAATGGTACAAGTTGTTTATGGATATATATTATTT
ATTGTATATAAGTAAAGGTAATACAAATGTTCATCAAGTATGGTATAGTGAGAGTTCCCA
GAAAATAAAAACTCAAGGTGCAAGTACTATAATACAACAGCTCAAATATAACTCAAGATT
TCATTTTGGCAAT