Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g058400.3.1
CDS Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G02740.1)
Sequence

ATGGATCTGAGGAGAAATATAAACTTGATTCTTTTGTTAGTTTTGTTGGGCCATCATGTG
AAGGGAGAAAACGTTGTGTTCAATGTGAAACACAAATTTGGTGGGCGTGGAGGTGTGAGT
TTGAAAGAACTGAAAGCCCACGATGTTCATCGTCACGGTAGAATGCTCGGTGCAGCCGAT
TTTCAATTAGGTGGCAATGGCAGTCCAACCAGTTCAGTATTATATTTCACTAAGCTTTCA
ATTGGTACACCTTCCAAGGACTACCATGTTCAAGTAGATACTGGAAGTGACCTTTTATGG
CTAAGTTGTGCGGGATGTGATAACTGTCCTAAAGAAAGCACACTCGGGATAGATATGGCA
CAATATAACTTACAAGCATCAACGAGTGGGAAATCTATTACTTGTGATCAAGATGTTTGT
GCTACAATGTTTGAAGCAACCAGCTCAGACTGCAAGGTAGCAAAACCGTGTGAATATATG
GTTACTTACGGAGATGGAAGCACAAGCGGAGGACACTTTGTAAAAGATAACATCAATTTA
GATCAAGTCTCTGCCGGAGATAATAAAACATCACCCCTCCAAGGAAATGTAACATTTGGG
TGCTCGTCTAAACAATCTGGAGGCCTAGGTACATCTACTAATGCAGTTGATGGGATAATT
GGTTTTGGAGCAGCAAAAACGTCTGTTATCTCACAATTAGCTGCTGCTGGAACTGTCAAA
AGAGTATTTTCACATTGCCTCAATGGAAATAGTGGAGGTGGTATATTTGCTATTGGACAA
CTAGTTGAACCAAAAGTAAATACAACCCCATTACTCACAAATCGGCAACATTATACTGTT
TCTCTCAAGAATATTGAGGTTGACGGTGAAGTTCTAAACATTCCGACTTCCATATTTGAG
TCGAAGTATAGCGAAGCAGCAATAATTGACAGTGGAACAACTTTAGCATATCTTCCAAGC
AATGTCTATAATGCTGTCATGGGAAAGCTTATGGCAAAGCAACCAAAATTGAAGACTCAT
CATCATGAAGGGAACTTTGAGTGCTTTTCATACAGTGGAAATGTTGACAATGATTTCCCC
GTTGTAACATTTAAGTTCATGGGAAATCTTACTTTGACGGTCTATCCCCACGATTATCTT
TTCAAACTTCATGACGGTGACTGGTGTATTGGTTGGCAAGAGGGAATCGAGGGAAAGGAT
GGAGATGATCTTTTTCTGTTAGGAGATCTTGTGCTATCAAACAAGCTTTTTGTGTATGAT
CTTGAAAAAAAGACGCTTGGGTGGACTCAATATGACTGTGAGTATAGTTACAGTTCTTCC
AACATTAAGGTGAAAGATGATAGCTCTGAAAATGTGTATACAGTGGGAGCTCATAATATT
TCATCAGCATCTACTACTACTTTTACATTATTCCTCACACTTATCTCTTTCCTATGTTAT
TTCTTCAACTAG

Peptide Sequence

PEP ID

Solyc03g058400.3.1
PEP Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G02740.1)
Sequence

MDLRRNINLILLLVLLGHHVKGENVVFNVKHKFGGRGGVSLKELKAHDVHRHGRMLGAAD
FQLGGNGSPTSSVLYFTKLSIGTPSKDYHVQVDTGSDLLWLSCAGCDNCPKESTLGIDMA
QYNLQASTSGKSITCDQDVCATMFEATSSDCKVAKPCEYMVTYGDGSTSGGHFVKDNINL
DQVSAGDNKTSPLQGNVTFGCSSKQSGGLGTSTNAVDGIIGFGAAKTSVISQLAAAGTVK
RVFSHCLNGNSGGGIFAIGQLVEPKVNTTPLLTNRQHYTVSLKNIEVDGEVLNIPTSIFE
SKYSEAAIIDSGTTLAYLPSNVYNAVMGKLMAKQPKLKTHHHEGNFECFSYSGNVDNDFP
VVTFKFMGNLTLTVYPHDYLFKLHDGDWCIGWQEGIEGKDGDDLFLLGDLVLSNKLFVYD
LEKKTLGWTQYDCEYSYSSSNIKVKDDSSENVYTVGAHNISSASTTTFTLFLTLISFLCY
FFN*

Transcript Sequence

Transcript ID

Solyc03g058400.3.1
Transcript Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G02740.1)
Sequence

TACCCTTTTCTTCATTCACCTCACTCCTATTTTTTTCCCTTCTCCGGCAGGCCCACAAAA
ATTTAAAAAAAAAACAAAAAAAAGAGGAAAAATTAAGTTCCTTCTTCACGCTTCAAAATT
AATGGATCTGAGGAGAAATATAAACTTGATTCTTTTGTTAGTTTTGTTGGGCCATCATGT
GAAGGGAGAAAACGTTGTGTTCAATGTGAAACACAAATTTGGTGGGCGTGGAGGTGTGAG
TTTGAAAGAACTGAAAGCCCACGATGTTCATCGTCACGGTAGAATGCTCGGTGCAGCCGA
TTTTCAATTAGGTGGCAATGGCAGTCCAACCAGTTCAGTATTATATTTCACTAAGCTTTC
AATTGGTACACCTTCCAAGGACTACCATGTTCAAGTAGATACTGGAAGTGACCTTTTATG
GCTAAGTTGTGCGGGATGTGATAACTGTCCTAAAGAAAGCACACTCGGGATAGATATGGC
ACAATATAACTTACAAGCATCAACGAGTGGGAAATCTATTACTTGTGATCAAGATGTTTG
TGCTACAATGTTTGAAGCAACCAGCTCAGACTGCAAGGTAGCAAAACCGTGTGAATATAT
GGTTACTTACGGAGATGGAAGCACAAGCGGAGGACACTTTGTAAAAGATAACATCAATTT
AGATCAAGTCTCTGCCGGAGATAATAAAACATCACCCCTCCAAGGAAATGTAACATTTGG
GTGCTCGTCTAAACAATCTGGAGGCCTAGGTACATCTACTAATGCAGTTGATGGGATAAT
TGGTTTTGGAGCAGCAAAAACGTCTGTTATCTCACAATTAGCTGCTGCTGGAACTGTCAA
AAGAGTATTTTCACATTGCCTCAATGGAAATAGTGGAGGTGGTATATTTGCTATTGGACA
ACTAGTTGAACCAAAAGTAAATACAACCCCATTACTCACAAATCGGCAACATTATACTGT
TTCTCTCAAGAATATTGAGGTTGACGGTGAAGTTCTAAACATTCCGACTTCCATATTTGA
GTCGAAGTATAGCGAAGCAGCAATAATTGACAGTGGAACAACTTTAGCATATCTTCCAAG
CAATGTCTATAATGCTGTCATGGGAAAGCTTATGGCAAAGCAACCAAAATTGAAGACTCA
TCATCATGAAGGGAACTTTGAGTGCTTTTCATACAGTGGAAATGTTGACAATGATTTCCC
CGTTGTAACATTTAAGTTCATGGGAAATCTTACTTTGACGGTCTATCCCCACGATTATCT
TTTCAAACTTCATGACGGTGACTGGTGTATTGGTTGGCAAGAGGGAATCGAGGGAAAGGA
TGGAGATGATCTTTTTCTGTTAGGAGATCTTGTGCTATCAAACAAGCTTTTTGTGTATGA
TCTTGAAAAAAAGACGCTTGGGTGGACTCAATATGACTGTGAGTATAGTTACAGTTCTTC
CAACATTAAGGTGAAAGATGATAGCTCTGAAAATGTGTATACAGTGGGAGCTCATAATAT
TTCATCAGCATCTACTACTACTTTTACATTATTCCTCACACTTATCTCTTTCCTATGTTA
TTTCTTCAACTAGTACAACATGTACCATAATTACATTACATATAACAATCCAACATTTAT
GTTTATTCTTATAATATAATCGGTTTTGCTCTTAATTTTTATTTTATGTTTTTTGAATGT
CATGCACAATCAATGTATTGGATGCTTCCTATTCCATTGTCATTTTGTTTCAATATCAAA
TTCATCTAATTCCCGATTTTTTTTT