Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g051785.1.1
CDS Infomation	Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061EX66_THECC)
Sequence	ATGGTTAATCCCATGAACAAGGTGAGTCTATTTTTGTATACAAGTAAGCATGTATTTTCC TCCATGGTAAAAAAACCATATTTTTACGAACAGAGAGAACCCTTGTACGGTTGTCTAAGT TGCAATGGTTCACTCTCCGAGGCCTTATACGAAATGGCGAAACAAGGCCTCCAAGTGAAA TTCAAGGAATATGATACTGTGTTAAACGAATGTATAAACCAAAGGGCTATAAGAGAAGGT CAAAGGGTACATGCCCACATGATCAAATCTCACTATCAACCTCCAGTGTACCTCAGGACA AGGCTTATCGTTTTCTACATAAAATGTGGCCTTTTAGGTGATGCTAGGTGGGTGTTCGAT GAAATGCCTCAAAGGAATGTTGTTTCTTGGACTGCCCTTATTTCTGGCTATTCTCAAACT GGGGATATATCTGAAGCTATCCATCTTTTTCTTCAGATGTTGACATCAGGTACTGCGCCA AATGAGTTCACTTTTGCAACAGTGCTTACATCATGTACTAGTGCCATTGGGTTTCAGTTT GGGAGACAAATCCACTGTCTCTTAGTAAAGAGCCCTTTTGAATCACATGTATATGTGGGA AGCTCACTCCTTGATATGTATGCCAAAGCTGGCAAAGTTCATGAAGCTCGATATATTTTC GAAAACTTGCCAGAAAGAGATGTTGTCTCTTGCACTGCTATAATTTCAGGCTACGCTCAA CAGGGACTATATGAAGAGGCACTAGATCTATTTCGCAAGTTCCAGGTAGAGAGAATGTCT TTCAACTATGTTACATATACTAGTGTGTTAACAGCCTTATCAGGACTTGCTGCAGTTGAA GAAGGTCGCCAACTGCATGCCCGTATTATTCGATTGGAACTGCCCTTCTATGCGGTTCTT CATAATTCTCTCATTGATATGTACTCCAAGTGTGGAAAATTCACTTATTCAAGGATGATA TTTAATCAAATGTCCGAAAGAACTGTGAGCTCATGGAATGCTATGCTTATTGGTTACAGT AAACATGGGATGGGAAAGGAGGTAGTTGATCTCTTCGAAATGATGAGAGAAGAAGACAAA ATTAAGCCTGATGAGATAACTCTTTTAGCTGTGTTATCTAGTTGCAGCCATGGAGGAATG GAGGATAAAGGTGTAGAGATTTTTAACGATTTATGTAGTGGAAAAGAAAGGGTTGAGGTT AGCATTGAGCACTGTGGTTGTGTGGTTGATTTGCTAAGTCGATCTGGCCAAGTAGAAAGA GCCTTTCAGTTCATCAAAGAGATGCCTTCTGAACCAACTGCTGCAATTCTGGGTTCACTT TTAGGTGCTTGCTGGGCTCACCTGTATGTTGATATTGGTGAAATTGTAGCCAGAAGCCTT TTGGAGATAGAGCCAGAAAATGCTGGAACTTATGTAATTCTTTCAAACATGTATGCATCG GCAGGAAGGTGGGAGGATGCTAGAAGAGTAAGAGAGTTGATAAATGCAAGGGCCATGGTA AAGGAATCTGGAAAAAGCTGGATTGGTCCTGATTTTATCCATGAAACAGAAAAAGATATT GCAAAAACATAA

Peptide Sequence

PEP ID	Solyc03g051785.1.1
PEP Infomation	Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061EX66_THECC)
Sequence	MVNPMNKVSLFLYTSKHVFSSMVKKPYFYEQREPLYGCLSCNGSLSEALYEMAKQGLQVK FKEYDTVLNECINQRAIREGQRVHAHMIKSHYQPPVYLRTRLIVFYIKCGLLGDARWVFD EMPQRNVVSWTALISGYSQTGDISEAIHLFLQMLTSGTAPNEFTFATVLTSCTSAIGFQF GRQIHCLLVKSPFESHVYVGSSLLDMYAKAGKVHEARYIFENLPERDVVSCTAIISGYAQ QGLYEEALDLFRKFQVERMSFNYVTYTSVLTALSGLAAVEEGRQLHARIIRLELPFYAVL HNSLIDMYSKCGKFTYSRMIFNQMSERTVSSWNAMLIGYSKHGMGKEVVDLFEMMREEDK IKPDEITLLAVLSSCSHGGMEDKGVEIFNDLCSGKERVEVSIEHCGCVVDLLSRSGQVER AFQFIKEMPSEPTAAILGSLLGACWAHLYVDIGEIVARSLLEIEPENAGTYVILSNMYAS AGRWEDARRVRELINARAMVKESGKSWIGPDFIHETEKDIAKT*

Transcript Sequence

Transcript ID	Solyc03g051785.1.1
Transcript Infomation	Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061EX66_THECC)
Sequence	ATGGTTAATCCCATGAACAAGGTGAGTCTATTTTTGTATACAAGTAAGCATGTATTTTCC TCCATGGTAAAAAAACCATATTTTTACGAACAGAGAGAACCCTTGTACGGTTGTCTAAGT TGCAATGGTTCACTCTCCGAGGCCTTATACGAAATGGCGAAACAAGGCCTCCAAGTGAAA TTCAAGGAATATGATACTGTGTTAAACGAATGTATAAACCAAAGGGCTATAAGAGAAGGT CAAAGGGTACATGCCCACATGATCAAATCTCACTATCAACCTCCAGTGTACCTCAGGACA AGGCTTATCGTTTTCTACATAAAATGTGGCCTTTTAGGTGATGCTAGGTGGGTGTTCGAT GAAATGCCTCAAAGGAATGTTGTTTCTTGGACTGCCCTTATTTCTGGCTATTCTCAAACT GGGGATATATCTGAAGCTATCCATCTTTTTCTTCAGATGTTGACATCAGGTACTGCGCCA AATGAGTTCACTTTTGCAACAGTGCTTACATCATGTACTAGTGCCATTGGGTTTCAGTTT GGGAGACAAATCCACTGTCTCTTAGTAAAGAGCCCTTTTGAATCACATGTATATGTGGGA AGCTCACTCCTTGATATGTATGCCAAAGCTGGCAAAGTTCATGAAGCTCGATATATTTTC GAAAACTTGCCAGAAAGAGATGTTGTCTCTTGCACTGCTATAATTTCAGGCTACGCTCAA CAGGGACTATATGAAGAGGCACTAGATCTATTTCGCAAGTTCCAGGTAGAGAGAATGTCT TTCAACTATGTTACATATACTAGTGTGTTAACAGCCTTATCAGGACTTGCTGCAGTTGAA GAAGGTCGCCAACTGCATGCCCGTATTATTCGATTGGAACTGCCCTTCTATGCGGTTCTT CATAATTCTCTCATTGATATGTACTCCAAGTGTGGAAAATTCACTTATTCAAGGATGATA TTTAATCAAATGTCCGAAAGAACTGTGAGCTCATGGAATGCTATGCTTATTGGTTACAGT AAACATGGGATGGGAAAGGAGGTAGTTGATCTCTTCGAAATGATGAGAGAAGAAGACAAA ATTAAGCCTGATGAGATAACTCTTTTAGCTGTGTTATCTAGTTGCAGCCATGGAGGAATG GAGGATAAAGGTGTAGAGATTTTTAACGATTTATGTAGTGGAAAAGAAAGGGTTGAGGTT AGCATTGAGCACTGTGGTTGTGTGGTTGATTTGCTAAGTCGATCTGGCCAAGTAGAAAGA GCCTTTCAGTTCATCAAAGAGATGCCTTCTGAACCAACTGCTGCAATTCTGGGTTCACTT TTAGGTGCTTGCTGGGCTCACCTGTATGTTGATATTGGTGAAATTGTAGCCAGAAGCCTT TTGGAGATAGAGCCAGAAAATGCTGGAACTTATGTAATTCTTTCAAACATGTATGCATCG GCAGGAAGGTGGGAGGATGCTAGAAGAGTAAGAGAGTTGATAAATGCAAGGGCCATGGTA AAGGAATCTGGAAAAAGCTGGATTGGTCCTGATTTTATCCATGAAACAGAAAAAGATATT GCAAAAACATAATGGAATGGGGGCTTATATTCCTCACCAGTAACCAGTACGGATGAGCAG CGAGAAAAGAAAACGCTGCTCCATTGTTCCCAAGGTCGAGCGGTGATTTATTCACATGGA AACTAATTGGTAAAGTCTTGCTCCAAAAGGGAATAAAACTTGAAATTGCTTCTTGTATAT AATGGGGGTAGAGTTTTCTGATGGAGCAACTCACAGGTTTTCTTCTAATTGTGAAGTGAT CAGCTCTTCAAAGTGTTTGATTATCATTGATTGAAGATGGTAACATCAGACAGATCATGG TTAGCCAAAGCAGGTTGTTTGGTTTCATTGTGCACATTTTCACAAACATTATTGAGCTTC TACTCTGCAAAATGGTAACAGAATACAAGTAGAAACACTTTCAACGAGCAAAAGATTTGG TGGCTCAAATAAATGGAGACCGATCTTCCATGCAATGTTTGGAAAACTTTACGATACGGG ATAAAGATCCATTCAACTAATGTTAAG