Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g046340.3.1
CDS Infomation	ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** W9RE71_9ROSA)
Sequence	ATGGCATCTTTACCTCTTGTTTCAAATGACAGATTATTAGTTACTCACAAGAAATGGAAA CCCCATACTGGAAATTCTGAATCATTAAGAAGTTTCAAGAATCAATATTGCTCATTACCC AGTTCTTGTTTTACCTCAAGATTTTGTATATCTCAGTCTAGGTACAAGAAATGGATGCTT CATTTTGGGAATTCTGACCCTTTTAGGAGATTAAAGAATCAAACTTGCTCATTATCCAAT TCTTGTTTTACCTCAAGTTCTGTTCCTTTATTGGGATTGAATTATAGGTTTTGTAAATCT CAAAGTAGATTACTGCATTGTAGTACTGGGGTTAGGTCAATGGTAAATGAGAAGGGAGAT ATAGATACCCATTTGAACAAAACAGGAAGTAATAATATTCGTGGGAAGTTTTCGTTGAGA TTGAGACCAAGGATAAGATTACTGTCAAGAAGGTTGAAAAGGGTATCTGTTATATGTATG TTAAATGATTTTGGGAAGTTTCTGAGGAAGAACTCAAGAAGAGTGGCACTGTCAACTTCA ATTTCTGTGATATTGGGCTTGTGTTATTTGTTTCTAAGATTGACAGCAACTCCTCCTCCA AAGGTTGTTCCATATTCAGACTTGATTACCAGCCTTCAGGGAGGATCTGTGTCAAAGGTT CAATTTGAGGAAGGCACACGCCGTATTTACTACAATACGAACTTGTGGAGTCTTAAAAAT GCTCAGACAGGGGAAGATAATTCCTTAGTTCCCGATGAAAGCACGACCATCACTGAGGAA AGCAAAGATATAGATAGCAACAAAGGTGGCAAGAATGTCTTCAGTAAAATATCAAAAGCC CAAGGTTCTACCCCCGTATGGCAGTTTAGTACAAGGAAGATCGATCATGATGAAGGATAT CTTCTTAGTCTAATGAGGGAAAAGGGAACAGCGTATGGCTCAGCGCCACAATCAGCACTT ATGTCAATTAGGAGCTTATTAATTACTATGTTATCCTTATGGATTCCTTTGACTCCTATA ATGTGGCTTCTCTATCGTCAACTTTCTGCTGCCAATAGCCCTGCAAGAAAAAGAAAGCCA AGTAACCAGGTGGTTGGCTTTAATGATGTGGAGGGTGTGGATGCTGCAAAAGTTGAGCTT ATGGAGATAGTGTTGTGCCTGCGAGGAGCTATAAACTTCAGTAAGCTAGGGGCAAAGTTA CCAAGAGGCGTACTGCTTGTAGGTCCACCAGGGACAGGAAAAACCTTACTAGCTCGTGCT GTGGCAGGAGAAGCTGGAGTACCCTTCTTTTCTGTTTCTGCTAGTGAATTTGTTGAAATG TTTGTTGGAAGAGGAGCTGCTCGCATTAGAGACCTTTTCAGTGTAGCAAGAAAGAATGCT CCTTCAATCATTTTCATTGATGAACTAGATGCTGTCGGAGGAAAGCGTGGCAGGAGTTTC AATGATGAGAGAGACCAAACCTTGAATCAGTTGCTCACAGAGATGGATGGCTTTGAATCG GACTTGAATATCATTGTAGTTGCTGCTACTAATAGACCAGAAGCTCTAGATCCAGCACTA TGTCGGCCTGGACGTTTCTCCAGGAAAATCTTAGTGGGAGAACCTGATGAAGATGGAAGG AGAAAGATCCTGGCTGTACACTTGAGAGAAGTTCCCCTTGAGGAGGACCTGGAGCTTGTA TGTAACCTGGTTGCATCTCTTACCCAGGGCCTTGTAGGTGCTGACCTTGCCAACATTGTC AATGAAGCTGCTTTGCTTGCTGCTCGGAGAGGGGCTGATTGTGTGTCAAGGGAAGATATA ATGGAAGCCATAGAAAGAGCAAAATTTGGGATTAATGATAAGCAGTACACCCAAAGTGCA ATAGGTAAGGAACTGGAGAAACTGTTCCCTTGGGTTCCTTCTTTCATTAGGAAGAACAGT ACAAGAAGTGATGCATTTCAAGGACCTCTGGGGTATCAAGCTCTCAGTTGA

Peptide Sequence

PEP ID	Solyc03g046340.3.1
PEP Infomation	ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** W9RE71_9ROSA)
Sequence	MASLPLVSNDRLLVTHKKWKPHTGNSESLRSFKNQYCSLPSSCFTSRFCISQSRYKKWML HFGNSDPFRRLKNQTCSLSNSCFTSSSVPLLGLNYRFCKSQSRLLHCSTGVRSMVNEKGD IDTHLNKTGSNNIRGKFSLRLRPRIRLLSRRLKRVSVICMLNDFGKFLRKNSRRVALSTS ISVILGLCYLFLRLTATPPPKVVPYSDLITSLQGGSVSKVQFEEGTRRIYYNTNLWSLKN AQTGEDNSLVPDESTTITEESKDIDSNKGGKNVFSKISKAQGSTPVWQFSTRKIDHDEGY LLSLMREKGTAYGSAPQSALMSIRSLLITMLSLWIPLTPIMWLLYRQLSAANSPARKRKP SNQVVGFNDVEGVDAAKVELMEIVLCLRGAINFSKLGAKLPRGVLLVGPPGTGKTLLARA VAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFSVARKNAPSIIFIDELDAVGGKRGRSF NDERDQTLNQLLTEMDGFESDLNIIVVAATNRPEALDPALCRPGRFSRKILVGEPDEDGR RKILAVHLREVPLEEDLELVCNLVASLTQGLVGADLANIVNEAALLAARRGADCVSREDI MEAIERAKFGINDKQYTQSAIGKELEKLFPWVPSFIRKNSTRSDAFQGPLGYQALS*

Transcript Sequence

Transcript ID	Solyc03g046340.3.1
Transcript Infomation	ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** W9RE71_9ROSA)
Sequence	AAAGAACCCAAGATTTTGGTTTACCTTATATATACCCTCTCATTCTCTCAGTGTAGAACA ATTTTTGAAAACCCCCAAATCTTCTCTTATCTTCTCTCAAAGTTGCTCTACAATGCTAAA TCCGTAAAAAGTCTCCAGCTTCAGTATCAAAACCAGATATATTGTTAATCTTCAGTGCTG GGTTCAGGTTCTTTCCAAGTTTCATGGAACCGCTCATGTGTATATTGTAGAAAAATGGCA TCTTTACCTCTTGTTTCAAATGACAGATTATTAGTTACTCACAAGAAATGGAAACCCCAT ACTGGAAATTCTGAATCATTAAGAAGTTTCAAGAATCAATATTGCTCATTACCCAGTTCT TGTTTTACCTCAAGATTTTGTATATCTCAGTCTAGGTACAAGAAATGGATGCTTCATTTT GGGAATTCTGACCCTTTTAGGAGATTAAAGAATCAAACTTGCTCATTATCCAATTCTTGT TTTACCTCAAGTTCTGTTCCTTTATTGGGATTGAATTATAGGTTTTGTAAATCTCAAAGT AGATTACTGCATTGTAGTACTGGGGTTAGGTCAATGGTAAATGAGAAGGGAGATATAGAT ACCCATTTGAACAAAACAGGAAGTAATAATATTCGTGGGAAGTTTTCGTTGAGATTGAGA CCAAGGATAAGATTACTGTCAAGAAGGTTGAAAAGGGTATCTGTTATATGTATGTTAAAT GATTTTGGGAAGTTTCTGAGGAAGAACTCAAGAAGAGTGGCACTGTCAACTTCAATTTCT GTGATATTGGGCTTGTGTTATTTGTTTCTAAGATTGACAGCAACTCCTCCTCCAAAGGTT GTTCCATATTCAGACTTGATTACCAGCCTTCAGGGAGGATCTGTGTCAAAGGTTCAATTT GAGGAAGGCACACGCCGTATTTACTACAATACGAACTTGTGGAGTCTTAAAAATGCTCAG ACAGGGGAAGATAATTCCTTAGTTCCCGATGAAAGCACGACCATCACTGAGGAAAGCAAA GATATAGATAGCAACAAAGGTGGCAAGAATGTCTTCAGTAAAATATCAAAAGCCCAAGGT TCTACCCCCGTATGGCAGTTTAGTACAAGGAAGATCGATCATGATGAAGGATATCTTCTT AGTCTAATGAGGGAAAAGGGAACAGCGTATGGCTCAGCGCCACAATCAGCACTTATGTCA ATTAGGAGCTTATTAATTACTATGTTATCCTTATGGATTCCTTTGACTCCTATAATGTGG CTTCTCTATCGTCAACTTTCTGCTGCCAATAGCCCTGCAAGAAAAAGAAAGCCAAGTAAC CAGGTGGTTGGCTTTAATGATGTGGAGGGTGTGGATGCTGCAAAAGTTGAGCTTATGGAG ATAGTGTTGTGCCTGCGAGGAGCTATAAACTTCAGTAAGCTAGGGGCAAAGTTACCAAGA GGCGTACTGCTTGTAGGTCCACCAGGGACAGGAAAAACCTTACTAGCTCGTGCTGTGGCA GGAGAAGCTGGAGTACCCTTCTTTTCTGTTTCTGCTAGTGAATTTGTTGAAATGTTTGTT GGAAGAGGAGCTGCTCGCATTAGAGACCTTTTCAGTGTAGCAAGAAAGAATGCTCCTTCA ATCATTTTCATTGATGAACTAGATGCTGTCGGAGGAAAGCGTGGCAGGAGTTTCAATGAT GAGAGAGACCAAACCTTGAATCAGTTGCTCACAGAGATGGATGGCTTTGAATCGGACTTG AATATCATTGTAGTTGCTGCTACTAATAGACCAGAAGCTCTAGATCCAGCACTATGTCGG CCTGGACGTTTCTCCAGGAAAATCTTAGTGGGAGAACCTGATGAAGATGGAAGGAGAAAG ATCCTGGCTGTACACTTGAGAGAAGTTCCCCTTGAGGAGGACCTGGAGCTTGTATGTAAC CTGGTTGCATCTCTTACCCAGGGCCTTGTAGGTGCTGACCTTGCCAACATTGTCAATGAA GCTGCTTTGCTTGCTGCTCGGAGAGGGGCTGATTGTGTGTCAAGGGAAGATATAATGGAA GCCATAGAAAGAGCAAAATTTGGGATTAATGATAAGCAGTACACCCAAAGTGCAATAGGT AAGGAACTGGAGAAACTGTTCCCTTGGGTTCCTTCTTTCATTAGGAAGAACAGTACAAGA AGTGATGCATTTCAAGGACCTCTGGGGTATCAAGCTCTCAGTTGAGATATTAACCCTCTT GTTTGTATAATGTTTTTTTCTCCAAATGTTCAAGAATGTAATGCAATGGAAAAAATGGTT GTTGATTATCCATATTGCCAACCTCAACTTGTTTGGGGTTGACATATAGTATAAGAATGT AATGCGAAAACTGAGACATGGAATTCTTTAGGCAACTATTTGAACAAAGATTTTTATTTT TTTTGTATTAATGCCCCTTCTTCCCTTTTTTGGGATGTGTGGGGCTGAACATTGAACCCT CAACATGGTTATTATAGACATAATAAAAATAACTGGCTGATTTTTTGCCCAAGTTTAGAC GG