Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g043880.3.1
CDS Infomation

SlBCAT4
Sequence

ATGGAGAGCGGCGGCGTATTAGCAGGGCTTCACCGGAATCCTACTTGCCACCACCTTCTC
CGGCCACCACGAGCCGCCGTTAATAATCTTCTCTCTTCTTCTTCCTTCACCGATAAGCGC
CATTTTTCTCCTCTTCCTCTCAAGTTTCAGAAGCAGTCACATTTTGCTTCTTATAGTTGT
AATTGCTCCATAAACGATGGGAGTGCTTTTCAGGTGGCGAGTTCTGCTAGTGCAACAGCT
GAATTAGCCAACATCGATTGGGACAACATTGGCTTTGCGGTAATGCCTACTGATTATATG
TATAGCATGAAATGTTCTCAAGATGGAAACTTTTCTAAGGGTGAGCTCCAACGTTTTGGG
AATATTGAGTTGAGCCCAGCTTCTGGGATATTGAATTATGGACAGGGATTGTTTGAAGGT
TTAAAAGCCTATAAAAGACATGATGGTAATATATTGCTATTTCGACCTGAAGAAAATGCT
CTGCGCATGAAGATGGGAGCAGAACGTATATGCATGCCTTCACCATCTGTTGAACAGTTT
GTGGAAGCAGTAAAAGCCACTGTTTTAGCAAATGAAAGATGGATTCCTCCACCAGGTAAA
GGTTCATTATACATAAGACCACTGCTTATGGGGAGTGGAGCTATTCTTGGTGTTGCTCCA
GCTCCTGAGTACACATTCCTGATTTATGTTTCACCTGTGGGAAACTATTTTAAGGAAGGT
ATGGCACCAATAAATTTGTTAATTGAGACAGAAATGCATCGCGCAACTCCTGGAGGTACC
GGAGGTGTCAAGACTATAGGAAATTATGCTGCGGTTCTGAAGGCACAGAGTGCTGCTAAA
GCAAAAGGCTACTCTGATGTTCTGTACCTTGATTCTGTCAACAATAGATACCTAGAGGAG
GTTTCCTCTTGTAATGTCTTCATCGTGAAGGGTAATCTGATAGCAACTCCTGCAATTAAA
GGAACCATTCTTCCTGGTATCACACGAAAGAGCATAATTGACGTAGCTCTAAGCCAAGGG
TTCCAGGTTGAAGAACGGCAAGTGTCTGTGGACGAATTGCTTGATGCTGATGAAGTGTTC
TGCACAGGAACAGCAGTGGTTGTATCTCCTGTTGGCAGCATTACTCATCTTGGGAAAAGG
GTATCATATGGAAGTGATGGGGTTGGTCGTGTATCAAAGCAATTATATTCTACACTTACA
AGCCTACAAATGGGACTAGCAACGGATAACATGAATTGGACTGTTGAGCTAAAATGA

Peptide Sequence

PEP ID

Solyc03g043880.3.1
PEP Infomation

SlBCAT4
Sequence

MESGGVLAGLHRNPTCHHLLRPPRAAVNNLLSSSSFTDKRHFSPLPLKFQKQSHFASYSC
NCSINDGSAFQVASSASATAELANIDWDNIGFAVMPTDYMYSMKCSQDGNFSKGELQRFG
NIELSPASGILNYGQGLFEGLKAYKRHDGNILLFRPEENALRMKMGAERICMPSPSVEQF
VEAVKATVLANERWIPPPGKGSLYIRPLLMGSGAILGVAPAPEYTFLIYVSPVGNYFKEG
MAPINLLIETEMHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDSVNNRYLEE
VSSCNVFIVKGNLIATPAIKGTILPGITRKSIIDVALSQGFQVEERQVSVDELLDADEVF
CTGTAVVVSPVGSITHLGKRVSYGSDGVGRVSKQLYSTLTSLQMGLATDNMNWTVELK*

Transcript Sequence

Transcript ID

Solyc03g043880.3.1
Transcript Infomation

SlBCAT4
Sequence

ATAATAGTCAATAAATTGCAGCACGTCGTTCAAAATTAGAAAAATTAAGAAAGCATTGGA
AGTGTGACAAACGAAACGGCTCAAGTCGTAGAAGAAGAAGAAATCAATGGAGAGCGGCGG
CGTATTAGCAGGGCTTCACCGGAATCCTACTTGCCACCACCTTCTCCGGCCACCACGAGC
CGCCGTTAATAATCTTCTCTCTTCTTCTTCCTTCACCGATAAGCGCCATTTTTCTCCTCT
TCCTCTCAAGTTTCAGAAGCAGTCACATTTTGCTTCTTATAGTTGTAATTGCTCCATAAA
CGATGGGAGTGCTTTTCAGGTGGCGAGTTCTGCTAGTGCAACAGCTGAATTAGCCAACAT
CGATTGGGACAACATTGGCTTTGCGGTAATGCCTACTGATTATATGTATAGCATGAAATG
TTCTCAAGATGGAAACTTTTCTAAGGGTGAGCTCCAACGTTTTGGGAATATTGAGTTGAG
CCCAGCTTCTGGGATATTGAATTATGGACAGGGATTGTTTGAAGGTTTAAAAGCCTATAA
AAGACATGATGGTAATATATTGCTATTTCGACCTGAAGAAAATGCTCTGCGCATGAAGAT
GGGAGCAGAACGTATATGCATGCCTTCACCATCTGTTGAACAGTTTGTGGAAGCAGTAAA
AGCCACTGTTTTAGCAAATGAAAGATGGATTCCTCCACCAGGTAAAGGTTCATTATACAT
AAGACCACTGCTTATGGGGAGTGGAGCTATTCTTGGTGTTGCTCCAGCTCCTGAGTACAC
ATTCCTGATTTATGTTTCACCTGTGGGAAACTATTTTAAGGAAGGTATGGCACCAATAAA
TTTGTTAATTGAGACAGAAATGCATCGCGCAACTCCTGGAGGTACCGGAGGTGTCAAGAC
TATAGGAAATTATGCTGCGGTTCTGAAGGCACAGAGTGCTGCTAAAGCAAAAGGCTACTC
TGATGTTCTGTACCTTGATTCTGTCAACAATAGATACCTAGAGGAGGTTTCCTCTTGTAA
TGTCTTCATCGTGAAGGGTAATCTGATAGCAACTCCTGCAATTAAAGGAACCATTCTTCC
TGGTATCACACGAAAGAGCATAATTGACGTAGCTCTAAGCCAAGGGTTCCAGGTTGAAGA
ACGGCAAGTGTCTGTGGACGAATTGCTTGATGCTGATGAAGTGTTCTGCACAGGAACAGC
AGTGGTTGTATCTCCTGTTGGCAGCATTACTCATCTTGGGAAAAGGGTATCATATGGAAG
TGATGGGGTTGGTCGTGTATCAAAGCAATTATATTCTACACTTACAAGCCTACAAATGGG
ACTAGCAACGGATAACATGAATTGGACTGTTGAGCTAAAATGAGCTTTGCTATCTTTGGA
TAAAAAAGTTATATTCAGTGGATAGTAAATATTCATGACACTACAATTTTACTGTGTTAT
TAATTTATTTTCAAGGTTTATTTAGGCCTCTTATGGAGAGTTACCTAATGTTGTATGTCA
ATTTTAGTTCATGCTGTATTTTCTTTTACAATGTTAATGCACATAACTTAAACACTCTCT
TCTAGCTTAAGTTTGTCTGAAGTTCTCGCATTGTCATATAGACTTTTATATGTCTGTTAA
CGATCTCAGTTGATATCATTTGTATGTCTGTTATATCTCCTAGCTACTTAGCTGATCGCT
TAATATGTCTTCCAACTCGAAGACACTTTCAATGGAGATTGTCAAAATCAACATTCTGAT
TTGACTTGTTGGGGAAATGCAAGCGGGCAGAAAGAGGATATGTCAAAGTTTCGAATCAAA
ATTCCTTCCAGATGTGTTGAATTTTTGAGCGACGGGCAACAAGTAACACCTTCATGTGAA
AGAAAGATTTGTTGTAGTGAATCATGTCACGAATTTACTTTTTTCCCAAGAATGATCACA
CATAACTTGATTTTTATGTTTTTTTGAAGCTATATCATAGAAAATTTTGAGCATGATTGA
AGCCTATCTTTTATTTACTTCAAGGAAGGTGACTTCTCTCGTAGAACCTTCAATCAACAC
TTACAAAACTCGATGGGGCACTTAAAGACAACTCGACAACAAGACTTAGATTCTAATCAT
TTTCGTGACTTGAATTTTTGTAGATGACGATGTATAATCATCTTCATGTCACCTTTATTT
TTTCATTCATTCATGTATCAAATTCTTTTAATATTTGAGCAATATTTTTTTTTAAAACTT
CATCGCAAATCCTCTTCTTCTTTCAATTATATATGCCTAAATATTGCGAAGAGTATGATC
AAACACATATACTTATAAAAAAAATTTTTGGGGAGGGGGGCGT