Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g043760.3.1
CDS Infomation

Chromatin SPT2 (AHRD V3.3 *** A0A118JSU1_CYNCS)
Sequence

ATGCGGGGATATGAAGGAGATGAATATGATGATTCGTATTTGGATGAGTATGAGACTGAA
GGTGAAGAGGAAGAGGCTGGTGAAGAGGAATATGAGGATGAAGAGCCTCAACAGCCTTCA
CAGGAGTTGTTAGAGTACCTGGAGCTGAGGCAACGGTTAAAAGATGATATCAGGAAGCAG
AGGAAGAAAGAACTAGGTGGTGGTTCTCGTGATTTTAAAAAGAATGCATCATCCAGGGAT
AATTTTGGTTCCTTCTTTGGACCTTCACAGCCTGTTATCTCTAACAGAGTGATCCAAGAA
AGCAAGTCTCTACTGGAGAATCCAAATCTGGCAGCTAAAGTCATGAAATCTAACCATTCG
CAGAGCAATAAGAGTGTTGCTTCAAAACCTGCAAAACCTGCAGGATCAAGAGCTTCCACC
AGCAACCATGCACCAAAAGTCACAAATGGGTTAAAAAGAAAGATCGATATGGTAAAAAAT
ACAAGGGACTATTCGTTTCTATTATCTGATGATGCTGAACTTCCTGGTCCATCAAGAGGT
TCTTTAACTCAGAAAGTGTCTGCCCCTTATTGTGATGCACGGTTCGGAAAGCAGACTTCA
AGTGATAGTGGGAGAAAGCTTCTAGATGATCGTGAAATGAGAAGAGACGGCCAAAGGCAA
CCTAAAGCTGTGATTCAAAAATCGGTGTCTATTAATAAACCGACTCAACAAATGTTAGAC
TCTAGGAAACAGTTCGGTAGCAGTAATGGAAGTGGGCCTGGACGGCCGCCTTTGCGGCCA
AAAGGGGCGTCCCCCAAGGTTACTGGGGCACCAGGCTCCAAGAGTACTGTGCCTGCTTCC
CACAGGCCAACCCCTTCAAGAGTGCAACCCGCTGTACCAAGGCAATCTTCGGTACAGAAC
AGGCTACCACTGGAATCTGGCAAGTCAAAAGTGATGTCAAAACAAGGTGTCCCTGTCTCC
AAACCTCAGGCGGTGATTCAGAAACAACAAGCTTCCTTGGCTAGACCTCAGATAAAACCA
CCACCTCCTAGAAATGTAGCACGTCCCTCGGACGATAGACGCCCAGCACTTCAGCAAAGA
GATGAAAGGCGCCCATCACTTCCGCAAAGGGATGAAAGGCGCTCATCACTTCAGCAAAGG
GATGAAAGGCGCCCATCACTTCAGCAAAGGGATGACAGGCGTCCATCGCTTCAGCAAAGG
GATGACAGGCGCCCATCCCTTCAGCAAAGGGATGACAGGCGCCCATCCCTTCAGCAAAGG
GATGACAGGCGCCCATCCCTTCAGCAAAGGGATGACAGGCGCCCACTTCAGCAAAGGGAT
GACAGACGCCCAGCACTTCAGCAAAGAGATGACAGGCGCCCAGCACTTCAGCGAAAAGAA
GAGAGGCGCCCAGTTCATCAACAAAAAGATGATAGACGCCCAGCAAGAAAACCAACGAGA
TATGATGAAGAAGATGATGGAGAACAAGCCATTAGTATGATTAGGGAGATGTTTGGGTAT
AATCCAAATAGGTACCGTGACGATGATGATGTTAGTGATATGGAGGCTAATTTCGATGAA
ATTTTGAAGGAAGAAAGGCGGAGTGCAAAAATAGCAAGGGAAGAGGATGAAGAAGAACTC
CGGAAGATAGAAGAAGAAGAAAGGCGGGAGCGACTGAGAAAACAAAAGAAGCGCAAGTTG
AGCCATCAATGA

Peptide Sequence

PEP ID

Solyc03g043760.3.1
PEP Infomation

Chromatin SPT2 (AHRD V3.3 *** A0A118JSU1_CYNCS)
Sequence

MRGYEGDEYDDSYLDEYETEGEEEEAGEEEYEDEEPQQPSQELLEYLELRQRLKDDIRKQ
RKKELGGGSRDFKKNASSRDNFGSFFGPSQPVISNRVIQESKSLLENPNLAAKVMKSNHS
QSNKSVASKPAKPAGSRASTSNHAPKVTNGLKRKIDMVKNTRDYSFLLSDDAELPGPSRG
SLTQKVSAPYCDARFGKQTSSDSGRKLLDDREMRRDGQRQPKAVIQKSVSINKPTQQMLD
SRKQFGSSNGSGPGRPPLRPKGASPKVTGAPGSKSTVPASHRPTPSRVQPAVPRQSSVQN
RLPLESGKSKVMSKQGVPVSKPQAVIQKQQASLARPQIKPPPPRNVARPSDDRRPALQQR
DERRPSLPQRDERRSSLQQRDERRPSLQQRDDRRPSLQQRDDRRPSLQQRDDRRPSLQQR
DDRRPSLQQRDDRRPLQQRDDRRPALQQRDDRRPALQRKEERRPVHQQKDDRRPARKPTR
YDEEDDGEQAISMIREMFGYNPNRYRDDDDVSDMEANFDEILKEERRSAKIAREEDEEEL
RKIEEEERRERLRKQKKRKLSHQ*

Transcript Sequence

Transcript ID

Solyc03g043760.3.1
Transcript Infomation

Chromatin SPT2 (AHRD V3.3 *** A0A118JSU1_CYNCS)
Sequence

TTAAAAGATGGATCGTTTCGAGCCACAACCTTGTTGGTAGAAAAGATTATAGATATGAAA
ATTTGAGTTTAATTAAGTAGAAAGATAATTTTGATGGCTAAAAATGGTTGTGAGGAGGTT
ATAATTAGTAAAGAATGTTGTAATGAAACAATTGAAATTCTAAGTATGGGCTCATTCGAA
ATTGAGCCCGTTTTCGGGTATATACAACACACCCCAGCGCACGATAGCCTTGCCTCCTCA
TCTCTAGTTTGCCCTAAGAGCTTTATCTTCCTTTTTCTCCCAAATAATAATCCCTTATTC
ACCGACGATATCGCATCAAAACCGCTCAATTCTTCAGATCCTGAAACGATTCGTTCACTT
CTCTCCAAGAAAAATCAATGCTTTTTTTCGGATTTCGGTAGATCGATACAGGAATTCAGC
TATTTGTTTTTCTCGGAGATCTCCAGGGTCAGGTCAGCCTTCCCAAGCAGCTATGCGGGG
ATATGAAGGAGATGAATATGATGATTCGTATTTGGATGAGTATGAGACTGAAGGTGAAGA
GGAAGAGGCTGGTGAAGAGGAATATGAGGATGAAGAGCCTCAACAGCCTTCACAGGAGTT
GTTAGAGTACCTGGAGCTGAGGCAACGGTTAAAAGATGATATCAGGAAGCAGAGGAAGAA
AGAACTAGGTGGTGGTTCTCGTGATTTTAAAAAGAATGCATCATCCAGGGATAATTTTGG
TTCCTTCTTTGGACCTTCACAGCCTGTTATCTCTAACAGAGTGATCCAAGAAAGCAAGTC
TCTACTGGAGAATCCAAATCTGGCAGCTAAAGTCATGAAATCTAACCATTCGCAGAGCAA
TAAGAGTGTTGCTTCAAAACCTGCAAAACCTGCAGGATCAAGAGCTTCCACCAGCAACCA
TGCACCAAAAGTCACAAATGGGTTAAAAAGAAAGATCGATATGGTAAAAAATACAAGGGA
CTATTCGTTTCTATTATCTGATGATGCTGAACTTCCTGGTCCATCAAGAGGTTCTTTAAC
TCAGAAAGTGTCTGCCCCTTATTGTGATGCACGGTTCGGAAAGCAGACTTCAAGTGATAG
TGGGAGAAAGCTTCTAGATGATCGTGAAATGAGAAGAGACGGCCAAAGGCAACCTAAAGC
TGTGATTCAAAAATCGGTGTCTATTAATAAACCGACTCAACAAATGTTAGACTCTAGGAA
ACAGTTCGGTAGCAGTAATGGAAGTGGGCCTGGACGGCCGCCTTTGCGGCCAAAAGGGGC
GTCCCCCAAGGTTACTGGGGCACCAGGCTCCAAGAGTACTGTGCCTGCTTCCCACAGGCC
AACCCCTTCAAGAGTGCAACCCGCTGTACCAAGGCAATCTTCGGTACAGAACAGGCTACC
ACTGGAATCTGGCAAGTCAAAAGTGATGTCAAAACAAGGTGTCCCTGTCTCCAAACCTCA
GGCGGTGATTCAGAAACAACAAGCTTCCTTGGCTAGACCTCAGATAAAACCACCACCTCC
TAGAAATGTAGCACGTCCCTCGGACGATAGACGCCCAGCACTTCAGCAAAGAGATGAAAG
GCGCCCATCACTTCCGCAAAGGGATGAAAGGCGCTCATCACTTCAGCAAAGGGATGAAAG
GCGCCCATCACTTCAGCAAAGGGATGACAGGCGTCCATCGCTTCAGCAAAGGGATGACAG
GCGCCCATCCCTTCAGCAAAGGGATGACAGGCGCCCATCCCTTCAGCAAAGGGATGACAG
GCGCCCATCCCTTCAGCAAAGGGATGACAGGCGCCCACTTCAGCAAAGGGATGACAGACG
CCCAGCACTTCAGCAAAGAGATGACAGGCGCCCAGCACTTCAGCGAAAAGAAGAGAGGCG
CCCAGTTCATCAACAAAAAGATGATAGACGCCCAGCAAGAAAACCAACGAGATATGATGA
AGAAGATGATGGAGAACAAGCCATTAGTATGATTAGGGAGATGTTTGGGTATAATCCAAA
TAGGTACCGTGACGATGATGATGTTAGTGATATGGAGGCTAATTTCGATGAAATTTTGAA
GGAAGAAAGGCGGAGTGCAAAAATAGCAAGGGAAGAGGATGAAGAAGAACTCCGGAAGAT
AGAAGAAGAAGAAAGGCGGGAGCGACTGAGAAAACAAAAGAAGCGCAAGTTGAGCCATCA
ATGACAAAGATAAATTGTTCTTTACTTTGTCGATAGGCACCTTTAGAAGGGTGTTGTAGC
ATTGTTTTTTTTTCTGTCTTGCTGGTTATAGGGCAGGATAATGATGTGGGTTGAGGTGGA
ATTGTACAGTCTCCCCCTTAAGTTTTGAATAGATGTTGTAACTATTGGTTTATTTGTTGG
GGCGTAATTGTTCAATTAGTTTATGGGAAGATCTTTTTTCTTATACTTTGCAGCAATAAT
TGTGGCCCCAAAAGCTGAATCTGGTCTCCTAAGCATTGGAGGCTCTTAGTTAAGATATTT
GATCTTCTATTGGTTGTGCTTCTGTTGCACCATTTTGGGGGACATGATAATTGATATTGT
CCATCATGCAAGGTTTTTTTTGTTTCACAAAAAGGTGATTCAAAGTTTATAGAACCAAAA
GTTTAATGGTCTTGTGTTTTTTGTGAATCTAAATGTAGTTTCAAACAGTTACTCCCTACT
GTTAGAGATTACAACATGTCCAGTGTAATGAGGATGGTATATGTGCAGGTCTTATGCGGT
TGTGGAGTTAATTTCACTAGTGGGGTAGGATGATATGTGCGCTAAGCGCATGAATGTAAT
TTCACTAGTGGGGTAGGATGATATGTGTGCTAAGACGATGAATGTAATTTCACTAGTGGG
GTAGGATGATATGTGCGCTAAGAGGATGAATGTAATTTCACTAGTGGGGTAGGATGATAT
GTGCTAAGACGATGAATATAATTTCACTAGTGGGGTAGGATGATATGTGCGCTAAAAGGA
TGAGTGTACGCTAATTTTACTTGTACCGAAACACATGGTGTATTGTCATATGGGATGTTG
GGATAATGGTGTGTGTTGCCTTAATGTTTAAAGGTAGTTTCATAAGGAGAGGAGAGGATG
ATGTCTGCGCTAATCTTACACTTACCTTTATGAAACAAACGGAGTATTGTCCTGCTTGCT
ATCTAAGTTATGTAGGTGTTTCGTATTAGAAATGTAGGGGATTATTAATTCGTGTTAGTT
ATTTATGTATTACTAATTCATGAGTATTAGGGATTTTTTGGTTGTTTGTTAGGAGTAAAA
TTGTTCAAGTATTAGGATCGCAAAATTACAGTACTACATTTTGTAGTATTTTTAGTTGTT
AGGTA