Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g043750.3.1
CDS Infomation

NAD(P)H dehydrogenase C1 (AHRD V3.3 *** AT5G08740.1)
Sequence

ATGAATCAGCTTCTTCCTCCTTTGCACCAGAAAAATCCAATTGCTTCAATGGAGTTTACT
CTAGCTTCTTCTGCTTCAGCAAAAACTGCACTACTCAGCTGCCGCCAAATGGGACTGGGT
TCGCCTAAATTACCAAATGTTTGGAGGAGAAGTTCATGGCGTTCTCGTAGCTCAAGGAGG
AATACATCGTTACGCACTGTTGCCATGAGCACTACAGCAGGATTGGTAAACAATATGGAA
GCTCCTGAAGCCAATGCTCAAAATGTTAATTATATGTGGCCTGATAAAAAGAGGCCAAGG
ATCTGCATAATAGGTGGTGGGTTTGGAGGTCTTTATACAGCACTGAGGTTAGAATCACTT
GTTTGGCCTGATGACAAGAAACCACAGGTAGTCCTCATCGATCAATCGGAACGTTTCGTT
TTTAAGCCATTGTTGTATGAACTTCTCTCTGGAGAAGTTGAGGCATGGGAAATTGCTCCA
CAATTCTCAGACTTGCTTGCCAATACTGGTGTGAGGTTCTTCAAAGACAGGGTAAAATGC
TTATATCCATGTGACCACTTGGGAACTAATGCACCTACAGCAGGGACTGTTCATCTCGAA
AGTGGTCTCCTCATAGAATATGACTGGTTGGTCCTTGCTATAGGAGCTGAGGCCAAACTT
GATATTGTTCCAGGCGCTGCAGATTATGCCTTGCCATTTTATACCCTAGAGGATGCTCAT
AGGGTTGATAAAAAGCTAAGAGAATTAGAGCGCAAAAACTTCGGTAAGGACTCTGCAATA
CGAGTAGCAGTGGTTGGATGTGGTTATGGAGGAGTTGAGTTAGCTGCCACGATATCGGAA
AGGTTGCAACAAAAGGGAATTGTACAAGCGATTAATGTTGATAAGACAATTTTGTCAAAT
GCTCCAGCAGGAAACAGGGAAGCAGCACTAAAAGTACTTTCTTCCAGGAAAGTTCAACTC
ATACTTGGTTATTTTGTCCGATGTATAACAAAAGGAAACGAGCCTCAGACTGATGCTGAA
CCTGGAAGTATAGACTCAGCAGCTGATCATTCTGAAAGTGTAACACTTGAATTGCAGCCT
GCTGAAAGAGGCTTGCAGGGTCAGACTATACGGGCAGATATAGTTTTATGGACTATTGGA
TCTAAACCACTGCTTCCTCAGTTGGAACCTAGTGATAAACCTTACGACATTCCTCTGAAT
GCTAGGGGACAAGCAGAAACTGATGAAACTCTCCGTGTCAAGGGTCATCCTCGTATATTT
GCTGTTGGTGATTCGTCTACATTAAGGGACAGGAATGGGAAGTTGCTTCCGGCTACTGCA
CAGGTTGCTTTTCAGCAAGCAGATTTTGCTGGTTGGAATTTGTGGGCTGCAATTAATGAC
CGCCCATTGTTGCCTTTTAGGTATCAAAATTTAGGTGAGATGATGACACTTGGAAAGTAT
GATGCTGCTGTTTCACCAAGTTTCACTGATGGGCTGACCTTGGAGGGTTTTGTTGGTCAT
ACTGCAAGGAAAATAGCGTATTTGATCAGATTACCAACTGATAAACACCGCGTGCAAGTA
GGAATCAGTTGGCTACTGAAATCCACAGTTGATTCAGTTGCAACAATACAGACAATGCTC
ACTAAAGCCCAGTGA

Peptide Sequence

PEP ID

Solyc03g043750.3.1
PEP Infomation

NAD(P)H dehydrogenase C1 (AHRD V3.3 *** AT5G08740.1)
Sequence

MNQLLPPLHQKNPIASMEFTLASSASAKTALLSCRQMGLGSPKLPNVWRRSSWRSRSSRR
NTSLRTVAMSTTAGLVNNMEAPEANAQNVNYMWPDKKRPRICIIGGGFGGLYTALRLESL
VWPDDKKPQVVLIDQSERFVFKPLLYELLSGEVEAWEIAPQFSDLLANTGVRFFKDRVKC
LYPCDHLGTNAPTAGTVHLESGLLIEYDWLVLAIGAEAKLDIVPGAADYALPFYTLEDAH
RVDKKLRELERKNFGKDSAIRVAVVGCGYGGVELAATISERLQQKGIVQAINVDKTILSN
APAGNREAALKVLSSRKVQLILGYFVRCITKGNEPQTDAEPGSIDSAADHSESVTLELQP
AERGLQGQTIRADIVLWTIGSKPLLPQLEPSDKPYDIPLNARGQAETDETLRVKGHPRIF
AVGDSSTLRDRNGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRYQNLGEMMTLGKY
DAAVSPSFTDGLTLEGFVGHTARKIAYLIRLPTDKHRVQVGISWLLKSTVDSVATIQTML
TKAQ*

Transcript Sequence

Transcript ID

Solyc03g043750.3.1
Transcript Infomation

NAD(P)H dehydrogenase C1 (AHRD V3.3 *** AT5G08740.1)
Sequence

AGTATCGAACGAAAAAGAGTATAATAAATTTATTAAAATGAATTAAATTGAAATTGACCT
AACACGTAAATGTTCCAAACTTAAATGGGTTGAACGGGTTCGGTTGGACTTTGCCAAACT
CCTGTTCGAGACACAAATAGTAAATTTTCTTTCTTTTTTTGTGTTTAGTAACGTGGAGCC
GAGCGGATCACTCAAAACGCCATATGAATCAGCTTCTTCCTCCTTTGCACCAGAAAAATC
CAATTGCTTCAATGGAGTTTACTCTAGCTTCTTCTGCTTCAGCAAAAACTGCACTACTCA
GCTGCCGCCAAATGGGACTGGGTTCGCCTAAATTACCAAATGTTTGGAGGAGAAGTTCAT
GGCGTTCTCGTAGCTCAAGGAGGAATACATCGTTACGCACTGTTGCCATGAGCACTACAG
CAGGATTGGTAAACAATATGGAAGCTCCTGAAGCCAATGCTCAAAATGTTAATTATATGT
GGCCTGATAAAAAGAGGCCAAGGATCTGCATAATAGGTGGTGGGTTTGGAGGTCTTTATA
CAGCACTGAGGTTAGAATCACTTGTTTGGCCTGATGACAAGAAACCACAGGTAGTCCTCA
TCGATCAATCGGAACGTTTCGTTTTTAAGCCATTGTTGTATGAACTTCTCTCTGGAGAAG
TTGAGGCATGGGAAATTGCTCCACAATTCTCAGACTTGCTTGCCAATACTGGTGTGAGGT
TCTTCAAAGACAGGGTAAAATGCTTATATCCATGTGACCACTTGGGAACTAATGCACCTA
CAGCAGGGACTGTTCATCTCGAAAGTGGTCTCCTCATAGAATATGACTGGTTGGTCCTTG
CTATAGGAGCTGAGGCCAAACTTGATATTGTTCCAGGCGCTGCAGATTATGCCTTGCCAT
TTTATACCCTAGAGGATGCTCATAGGGTTGATAAAAAGCTAAGAGAATTAGAGCGCAAAA
ACTTCGGTAAGGACTCTGCAATACGAGTAGCAGTGGTTGGATGTGGTTATGGAGGAGTTG
AGTTAGCTGCCACGATATCGGAAAGGTTGCAACAAAAGGGAATTGTACAAGCGATTAATG
TTGATAAGACAATTTTGTCAAATGCTCCAGCAGGAAACAGGGAAGCAGCACTAAAAGTAC
TTTCTTCCAGGAAAGTTCAACTCATACTTGGTTATTTTGTCCGATGTATAACAAAAGGAA
ACGAGCCTCAGACTGATGCTGAACCTGGAAGTATAGACTCAGCAGCTGATCATTCTGAAA
GTGTAACACTTGAATTGCAGCCTGCTGAAAGAGGCTTGCAGGGTCAGACTATACGGGCAG
ATATAGTTTTATGGACTATTGGATCTAAACCACTGCTTCCTCAGTTGGAACCTAGTGATA
AACCTTACGACATTCCTCTGAATGCTAGGGGACAAGCAGAAACTGATGAAACTCTCCGTG
TCAAGGGTCATCCTCGTATATTTGCTGTTGGTGATTCGTCTACATTAAGGGACAGGAATG
GGAAGTTGCTTCCGGCTACTGCACAGGTTGCTTTTCAGCAAGCAGATTTTGCTGGTTGGA
ATTTGTGGGCTGCAATTAATGACCGCCCATTGTTGCCTTTTAGGTATCAAAATTTAGGTG
AGATGATGACACTTGGAAAGTATGATGCTGCTGTTTCACCAAGTTTCACTGATGGGCTGA
CCTTGGAGGGTTTTGTTGGTCATACTGCAAGGAAAATAGCGTATTTGATCAGATTACCAA
CTGATAAACACCGCGTGCAAGTAGGAATCAGTTGGCTACTGAAATCCACAGTTGATTCAG
TTGCAACAATACAGACAATGCTCACTAAAGCCCAGTGAGGGTCCTAGATCAGTTGCTTTT
GGGTCAGTACAATCTTCTCTGGAACCCACCCTTCTTTATGCTGAGGAGGTATCGACAACC
CAATTTCGAAATCCTCTTCCTTTGTTAAGTAACTGTTTTAAGTTGTAACACTACAAACAA
TGCTTGCTAAAGCTCAAATCAGGATCTTAGTTTAATGTATTTGTTGCAATCACTTTAGGG
TGGGGAGCTAGTTTACATGTATATCCATCTTTCTTATAAAGAACATTCATGAACAACAGC
AGGTCCAATTATACTCAGATTTAAACCATTAAGGTGCATGAGAAATATTATAGAAATCTA
TTCTGAGTTGTTAATTGACCAAAATTTCCAAAGCTATCCTTGAAAAATCATAGGAAAGGT
GAGAATTGGAACCCCTAAGGTGGTGTTATAAAATTTGAGTGCAAACATGTATAAGAAAAA
TAAAATTAAGAAAAGGAGTTGAATGAGTTTTCTGTAGATGTGTTATTTTGACAAATTGAT
GATTCAAGTTTGTTCTTTATG