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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g043740.3.1
CDS Infomation

hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G65660.1)
Sequence

ATGGATAACCAATATTATGCACCACCACATTCAGATGCATCAAGGCCATCGTTAGGATTT
CCTTTGGGTACTGCTGTGCTTTTGATTGTCATTTTTAGCTTGAGTGGTATATTTTCTTGC
TGCTATCACTGGGAGAAGCTCCGATCGCTTCGTCGATCGTTTGCTGATTTGGAATCCGGC
CTCGATCCTACTTCTATGAAATATAAGCAAAACCATACGAATTGGAAACAACGCCAGAGT
CCAATTTTGCCAGCAGTTTTAATGCCAGGTGATGAATTTCCAAAATTCATAGCAATGCCA
TGTCCATGTCAGTTTCCGGCATCGGAAAAAGTCGTTCATGAGTTGCAGAAATTGCCGCTA
CCGTTGCCGTCGCCGCCTAAGCCGCCACGAACGGTGGCCGCAGTACCTTTCTATTAG

Peptide Sequence

PEP ID

Solyc03g043740.3.1
PEP Infomation

hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G65660.1)
Sequence

MDNQYYAPPHSDASRPSLGFPLGTAVLLIVIFSLSGIFSCCYHWEKLRSLRRSFADLESG
LDPTSMKYKQNHTNWKQRQSPILPAVLMPGDEFPKFIAMPCPCQFPASEKVVHELQKLPL
PLPSPPKPPRTVAAVPFY*

Transcript Sequence

Transcript ID

Solyc03g043740.3.1
Transcript Infomation

hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT5G65660.1)
Sequence

TCTAATTCACACCAATTTACTTGTTCTATTTTTTTCTTCTTTGTTACTTGCAATTTCTCT
AACATTCGAACTCTCTCGCAAATTCAAAAAAAAAAGAAAATATGGATAACCAATATTATG
CACCACCACATTCAGATGCATCAAGGCCATCGTTAGGATTTCCTTTGGGTACTGCTGTGC
TTTTGATTGTCATTTTTAGCTTGAGTGGTATATTTTCTTGCTGCTATCACTGGGAGAAGC
TCCGATCGCTTCGTCGATCGTTTGCTGATTTGGAATCCGGCCTCGATCCTACTTCTATGA
AATATAAGCAAAACCATACGAATTGGAAACAACGCCAGAGTCCAATTTTGCCAGCAGTTT
TAATGCCAGGTGATGAATTTCCAAAATTCATAGCAATGCCATGTCCATGTCAGTTTCCGG
CATCGGAAAAAGTCGTTCATGAGTTGCAGAAATTGCCGCTACCGTTGCCGTCGCCGCCTA
AGCCGCCACGAACGGTGGCCGCAGTACCTTTCTATTAGTAAAATAAAATTCAATTTTTAG
AAATGTGTAAATTAGCGTTATAGAGTTTTAGTTTAAATCGAATTCCCAATCTTTTTTTTA
CTTGTGAATACTAATGAAATCTCAACAATTCATTATTTCGGTTCACATTGAAAAATGTTA
TTAGTGATATATTTTCTATCAAAGATAATTTTATATTTACGCTGAAATTCAAAATATTAT
AGAAATAAATGAATATTTGTATTTTCTTAAAAAACTTGTGACGATATATATACTT