Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g033840.3.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

ATGTCCTCTTCATCAACAGAATCGAAAATGGCCACCACCAAGATGGTTTTATCGACAATA
GGCTCTATTGCGGCAACAGCCATGTTGGTTCGCACGATAGTTAACGACTACATCCCCCGG
GAGCTCCATGAGTATCTCTTCTTTGGACTCAAAAATATGTTCACCAAGTTCTCAAATCAG
CTAACGATGGTGATTGACGAATTTGATGGCCTCGTTAACAACGAAATTTATGATGCTGTT
GCAATCTATTTGGGCAACAAGTTGTCCCCTAACATCAAGCGACTTAAAATCAGTAAACCT
GCGAAGGAGAAAAATTTCAACATCACCATGGAGCGTAATGAGGAGGTGACAGATGTTTAT
AACGGACAGACATTCAAGTGGATTTGGCTCTGCAGACAAACACAACCTAAACACTTCTAC
AATCACAGAGACATGAATTCCACTCTAAAATCTGAAATCAGGTCCTTTGAGCTGACATTT
CACAAGAAAAACAAGGACCTTGTCATTAATTCTTACTTGCCATACATCATTAAAGAAGCA
AAACTGCAAAAACACGAAAGCAAGACAATCAAGATTCACACAGTTGATTATGAAAACATG
TACAATTTACATGATATGTGGAAGCCTGTGAATCTCGATCATCCTGCCACTTTTGGGACA
ATTGCAATGGAACAGGACCAAAAAGACACCATCTTGAAGGATTTGGAGAGATTTGTGAAG
AGGAAAGATTATTATAAGAAAGTTGGCAAGGCATGGAAAAGAGGGTATTTGTTGTTTGGT
CCTCCGGGGACTGGGAAATCTAGTTTGATTGCTGCAATGGCGAATTATTTGAACTTCGAT
ATATATGATTTGGAGTTGACTGTGCTGAGGAGGAATTCAGATTTAAAGAAGTTGTTGGTT
GCAACAACCAATAAGTCCATTTTGGTGGTGGAGGACATTGATTGTACCATTGACTTGCAA
CATAATTTAGCTAATCGATCTGCGTTTGCTCATTCAAATGGTTATCAGCAAGAAAGCAAG
GTGACCTTGTCAGGTTTACTGAATTTTATTGATGGATTATGGTCAAGCTGTGGCGATGAA
AGAATCATAATTTTCACAACAAATCACATAGAAAAACTCGACCCTGCATTGTTACGACCT
GGCAGAATGGATGTGCACATTCACATGGCATATTGCACACCTTGTGGCTTCAAACTTCTT
GCTAACAATTACTTGGGGATTAAAGATCATAAATTGTTCAAAGAAATTGAGGAATTGATT
GACACAGCCAATGTGACACCAGCAGAAGTGGCAGAACAACTGTTGAAGGAAGATGAAGCT
GAAGATTCCCTAAGAGGGTTGGTTAATTTTATTCACAAAAAGATAAAAGAGAAGGAAGAG
GCTGAGGCTAAGCCTGAGAAAGTAGAAATACCACAAGTGGAAGTAGGGTTGACAATGGAG
GGGGGCGGGTTGGATGCAGGGCAAACCCATATGAACCTTCAAAGACTACCCCGT

Peptide Sequence

PEP ID

Solyc03g033840.3.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

MSSSSTESKMATTKMVLSTIGSIAATAMLVRTIVNDYIPRELHEYLFFGLKNMFTKFSNQ
LTMVIDEFDGLVNNEIYDAVAIYLGNKLSPNIKRLKISKPAKEKNFNITMERNEEVTDVY
NGQTFKWIWLCRQTQPKHFYNHRDMNSTLKSEIRSFELTFHKKNKDLVINSYLPYIIKEA
KLQKHESKTIKIHTVDYENMYNLHDMWKPVNLDHPATFGTIAMEQDQKDTILKDLERFVK
RKDYYKKVGKAWKRGYLLFGPPGTGKSSLIAAMANYLNFDIYDLELTVLRRNSDLKKLLV
ATTNKSILVVEDIDCTIDLQHNLANRSAFAHSNGYQQESKVTLSGLLNFIDGLWSSCGDE
RIIIFTTNHIEKLDPALLRPGRMDVHIHMAYCTPCGFKLLANNYLGIKDHKLFKEIEELI
DTANVTPAEVAEQLLKEDEAEDSLRGLVNFIHKKIKEKEEAEAKPEKVEIPQVEVGLTME
GGGLDAGQTHMNLQRLPR

Transcript Sequence

Transcript ID

Solyc03g033840.3.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)
Sequence

TTTCCAATTTTTTTTTAATGAAGTTTAAATACCAAGCATATCCTTTTTAAGTGTTGGTGT
TTAATTTAGATGTTCCCATTTTTAGAACTTTGTAAATATAAATTTATCAATCCTACAAGA
TTTGTTAATGATTTTTAAGATATGTGAAATAAAGATTGTATTTAATATCGTGCCTAGCTC
AGCATAAATTGTCGACAAGGTAAGTTTACTCCAACAAAATTTGTTACATTTTAAAGATAA
ATAAAATGCTCATACTCTTTTTTCTAACGTCTCTTTATTTAATTTAAAAAAAGAATGACA
TATTCCCTTATTTAATAAATATTTAATAAAATACTCAACATCTTATCCGCGCTAAATCAC
ACACTTATAAAGTCCATAAAAATATACTCAATGTCTGCTCAAACTATATCACATAAATTA
AAACGATAATATTTTAAACTTTAAAGCACTGACTTGCCGGACATGACGCATGAACAAGGC
AAGTCTGTCAATTTGGTAAAACTTGAACAGACCAAGACTAAATAATTCTTTGTTACCCCT
ATTTACACTTCAAAAGGCCTCAATCAATTTAGATTCAAATCCCCAAGCTTCTTCCATGTA
ATTTTCATCAACCTCATTTCATGTATATTTTGCATTTTCCTCATATTATCTTTTATTAAG
TGACAAATAGAAACATGCCATGTCGATAATCGTAAAGTCAAAAAAATTGTTAAGGGCATT
TAACATTTATCATAATGTGTTTATACATGCATAGAGTAATATTTGACCTATATACACTAT
ATAAGTTGCTAACAAAAGGTGTTCAATTGATTATCCTTGACTTGACCACATATAGTTAAG
GCTGGTCAGATACCCTTCGTTGAAAACTATACGAAATATGTCAACTTGTTTTTCATATAA
ATACCCTTAACGAAATTTTGACTTCGCCACTGATTATCGTTAGCAATATCTCAGCCCCAC
AAATAGTGTATTTGAAATATAGGCAAAGGCGTAACCTGCAAGGAAATTCTAGTGGGCAAA
TGTGGGGGAAGTTTCAAAGTCTTCGTAGTCAATACCAACTACTACTATATTGTTAGTCTT
GGTGCAATTTTTTCTATTTCCTATTGGCCAATTTCTCACTCCATTTTGTTCTTTTCTTCA
CATGATTCTCCTATAAATTTGACATTTTTCTCAATTGCAATTGCACCCTGTTTCCCCTCA
CCTTCTTGTAGATCAGAACCTATATATCACGACACTAAAACTTGTAGCAAAATCTTGAGC
ACACACTAGCCAAAAAAGTCCTTCTAGAACATGTCCTCTTCATCAACAGAATCGAAAATG
GCCACCACCAAGATGGTTTTATCGACAATAGGCTCTATTGCGGCAACAGCCATGTTGGTT
CGCACGATAGTTAACGACTACATCCCCCGGGAGCTCCATGAGTATCTCTTCTTTGGACTC
AAAAATATGTTCACCAAGTTCTCAAATCAGCTAACGATGGTGATTGACGAATTTGATGGC
CTCGTTAACAACGAAATTTATGATGCTGTTGCAATCTATTTGGGCAACAAGTTGTCCCCT
AACATCAAGCGACTTAAAATCAGTAAACCTGCGAAGGAGAAAAATTTCAACATCACCATG
GAGCGTAATGAGGAGGTGACAGATGTTTATAACGGACAGACATTCAAGTGGATTTGGCTC
TGCAGACAAACACAACCTAAACACTTCTACAATCACAGAGACATGAATTCCACTCTAAAA
TCTGAAATCAGGTCCTTTGAGCTGACATTTCACAAGAAAAACAAGGACCTTGTCATTAAT
TCTTACTTGCCATACATCATTAAAGAAGCAAAACTGCAAAAACACGAAAGCAAGACAATC
AAGATTCACACAGTTGATTATGAAAACATGTACAATTTACATGATATGTGGAAGCCTGTG
AATCTCGATCATCCTGCCACTTTTGGGACAATTGCAATGGAACAGGACCAAAAAGACACC
ATCTTGAAGGATTTGGAGAGATTTGTGAAGAGGAAAGATTATTATAAGAAAGTTGGCAAG
GCATGGAAAAGAGGGTATTTGTTGTTTGGTCCTCCGGGGACTGGGAAATCTAGTTTGATT
GCTGCAATGGCGAATTATTTGAACTTCGATATATATGATTTGGAGTTGACTGTGCTGAGG
AGGAATTCAGATTTAAAGAAGTTGTTGGTTGCAACAACCAATAAGTCCATTTTGGTGGTG
GAGGACATTGATTGTACCATTGACTTGCAACATAATTTAGCTAATCGATCTGCGTTTGCT
CATTCAAATGGTTATCAGCAAGAAAGCAAGGTGACCTTGTCAGGTTTACTGAATTTTATT
GATGGATTATGGTCAAGCTGTGGCGATGAAAGAATCATAATTTTCACAACAAATCACATA
GAAAAACTCGACCCTGCATTGTTACGACCTGGCAGAATGGATGTGCACATTCACATGGCA
TATTGCACACCTTGTGGCTTCAAACTTCTTGCTAACAATTACTTGGGGATTAAAGATCAT
AAATTGTTCAAAGAAATTGAGGAATTGATTGACACAGCCAATGTGACACCAGCAGAAGTG
GCAGAACAACTGTTGAAGGAAGATGAAGCTGAAGATTCCCTAAGAGGGTTGGTTAATTTT
ATTCACAAAAAGATAAAAGAGAAGGAAGAGGCTGAGGCTAAGCCTGAGAAAGTAGAAATA
CCACAAGTGGAAGTAGGGTTGACAATGGAGGGGGGCGGGTTGGATGCAGGGCAAACCCAT
ATGAACCTTCAAAGACTACCCCGT