Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g033400.3.1
CDS Infomation

Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** K4BFL2_SOLLC)
Sequence

ATGACCCCTAACGGAGTTGAAGATGAAGATAAATTTCTAGCTTCTGGAGTCGCCGGCATT
CAACAGAACGCCTTTCACATGCATCGCGCTCTTGACTCAAATAATCTGAAAGATGCACTC
AAATATTCAGCTCAGATGCTGTCGGAGCTCCGAACTTCAAGGCTATCACCTCACAAATAC
TACGAGCTATATATGCGGGCTTTTGATGAATTGAGAAAGCTAGAAATGTTCTTCAAGGAG
GAGACAAAGCGGGGTTGCTCAATTGTTGAGTTGTATGAACTCGTGCAGCACGCTGGCAAC
ATTTTGCCTAGACTGTATCTACTTTGCACAGTGGGGTCTGTGTACATCAAATCCAAGGAG
GCTCCCGCCAAGGATATCCTTAAAGACCTGGTTGAAATGTGCCGTGGTATACAACATCCT
TTACGTGGACTCTTTCTGAGGAGTTACCTTTCCCAAGTTAGCAAGGATAAATTGCCTGAT
ATAGGTTCCGAGTATGAAGGAGATGCAGATACTGTTGTGGATGCTGTAGAGTTTGTACTC
CAAAATTTCACGGAAATGAACAAACTCTGGGTTAGAATGCAACATCAGGGACCTGCTCTG
GAAAAGATGAAACGCGAAAAAGAAAGGAGCGAGCTTCGTGATCTCGTCGGGAAAAATCTG
CATGTTCTCAGTCAAATTGAGGGTATTGACCTTGAGATGTACAAAGAGACGGTGCTTCCA
AGAATTTTAGAGCAGGTTGTCAACTGTAAAGATGAGATTGCTCAGGGCTATTTGATGGAT
TGCATAATTCAAGTCTTCCCTGATGAATATCACTTACAAACTCTTGAAACCTTATTGGGT
GCTTGTCCCCAGCTTCAGCCATCTGTTGATATCAAAATGGTGCTTGCTCGGCTGATGGAA
AGGCTCTCGAACTATGCTGCTTTAAGTACAGATGTTTTACCTGAGTTTTTTCAAGTGGAA
GCTTTTGCGAAACTAAACAGTGCCATAGGGAAGGTGATAGAAGCCCAAGAAAACATGCCT
ATAGCTGGAGTTGTGACTTTATATTCATCTCTTTTAACTTTTACTCTTCATGTCCACCCT
GATCGTCTTGATTATGTGGATCAGATTTTGGGTGCATGTGTTAAGAAGCTTTCCGGTAAA
GGAAAGCTCAAAGACAGTATAGCAACAAAACAGATTGTGGCCCTTCTAAGTGCTCCACTG
GAGAAGTATAAGGATATTGATACTGCATTAAAGCTTTCAAATTATCCTCATGTTATGGAG
CACCTTGATGATGCAACTAGCAAAGTGATGGCTAATGTTTTAGTTCAAACTATTCTGAAA
AATAAAACTTGCATCTCAACAGATGAAAAGGTTGAGGCTCTTTTTGAATTAATGAAAGGA
CTTATCAGAGATTTGGATGAGAATCTTCACGATGAGACTAAGTTTCTTTGTCCTCCATTT
AAGTTTGATGAAGAAGATTTCAAGGAAGAGCAGAACTCTGTTTCACGACTTATTCAAATG
CTTCACAATGACGACCCTGAGGAGATGCTGAAGATAATTTGCACCGTGAAGAAGCATATT
GTGACAGGAGGACCAAAGAGGCTTCCCTTTACAGTTCCTCCCCTCATTTTTAATTCTCTT
AAGTTGGTAAGGCGACTGCAAAACCAAGATGAAAATGCTCCAGAGGAGGAAACATCTGCT
ATACCTAAGAAAATTTTTCAGATTTTAAATCAGATAATTGAGGCTCTCTCAAGTGTTCCA
GTACCTGAGCTAGCACTAAGGTTGTACCTAGAGTGTGCTGAGGCTGCCAATGACTCTGAC
CTAGAGCCTGTTGCCTACGAATTCTTCACCCAAGCTTATATACTATACGAGGAAGAAATT
TCGGACTCTAAAGCACAGGTGACCGCAATACAATTAATAATAGGTACTCTTCAGAGAATG
CACATCTTTGGTGTTGAGAACAGGGACACGCTAACGCACAAGGCTACAGGGTACTCCGCA
AAACTCCTGAAGAAGCCTGATCAGTGCAAAGCTGTCTACTCTTGTGCTCATCTTTTCTGG
GTTGATGACCAGGACAGCATCAAGGATGGAGAGAGGGTTTTGCTTTGTTTAAAACGAGCC
TTAAGGATTGCAAATGCTGCTCAACAAATGTCGAATGCAACCCGAGGCAGCAGTGGATCA
GTCTTGCTCTTTATAGAAATTCTAAACAAGTATTTATATTTCTATGAGAAGGGTGTCACA
CAGATCACTGTTGCATCCATCCAGAGCCTACTCGAGCTAATAACAACTGAAATGCAAAGT
GAAAATAAAACAGCCGATCCTGCTGCAGACGCTCTGCTTGCAAGCACATTGCGCTATATC
CAGTTCCAGAAGGATAAAGGTGGCGCAGTTGGTGAGAAATATGATTCCATTAAGTCTTAA

Peptide Sequence

PEP ID

Solyc03g033400.3.1
PEP Infomation

Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** K4BFL2_SOLLC)
Sequence

MTPNGVEDEDKFLASGVAGIQQNAFHMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETKRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSKDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQHQGPALEKMKREKERSELRDLVGKNLHVLSQIEGIDLEMYKETVLP
RILEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLGACPQLQPSVDIKMVLARLME
RLSNYAALSTDVLPEFFQVEAFAKLNSAIGKVIEAQENMPIAGVVTLYSSLLTFTLHVHP
DRLDYVDQILGACVKKLSGKGKLKDSIATKQIVALLSAPLEKYKDIDTALKLSNYPHVME
HLDDATSKVMANVLVQTILKNKTCISTDEKVEALFELMKGLIRDLDENLHDETKFLCPPF
KFDEEDFKEEQNSVSRLIQMLHNDDPEEMLKIICTVKKHIVTGGPKRLPFTVPPLIFNSL
KLVRRLQNQDENAPEEETSAIPKKIFQILNQIIEALSSVPVPELALRLYLECAEAANDSD
LEPVAYEFFTQAYILYEEEISDSKAQVTAIQLIIGTLQRMHIFGVENRDTLTHKATGYSA
KLLKKPDQCKAVYSCAHLFWVDDQDSIKDGERVLLCLKRALRIANAAQQMSNATRGSSGS
VLLFIEILNKYLYFYEKGVTQITVASIQSLLELITTEMQSENKTADPAADALLASTLRYI
QFQKDKGGAVGEKYDSIKS*

Transcript Sequence

Transcript ID

Solyc03g033400.3.1
Transcript Infomation

Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** K4BFL2_SOLLC)
Sequence

AGTAATGTCACAAAACTGAAGTCAAAATACCAAACAGAGCCCAGAAAAGCTCGTCGACTT
TGCGAATTCACCGAGAAATCGATCGGAGAACACTATGACCCCTAACGGAGTTGAAGATGA
AGATAAATTTCTAGCTTCTGGAGTCGCCGGCATTCAACAGAACGCCTTTCACATGCATCG
CGCTCTTGACTCAAATAATCTGAAAGATGCACTCAAATATTCAGCTCAGATGCTGTCGGA
GCTCCGAACTTCAAGGCTATCACCTCACAAATACTACGAGCTATATATGCGGGCTTTTGA
TGAATTGAGAAAGCTAGAAATGTTCTTCAAGGAGGAGACAAAGCGGGGTTGCTCAATTGT
TGAGTTGTATGAACTCGTGCAGCACGCTGGCAACATTTTGCCTAGACTGTATCTACTTTG
CACAGTGGGGTCTGTGTACATCAAATCCAAGGAGGCTCCCGCCAAGGATATCCTTAAAGA
CCTGGTTGAAATGTGCCGTGGTATACAACATCCTTTACGTGGACTCTTTCTGAGGAGTTA
CCTTTCCCAAGTTAGCAAGGATAAATTGCCTGATATAGGTTCCGAGTATGAAGGAGATGC
AGATACTGTTGTGGATGCTGTAGAGTTTGTACTCCAAAATTTCACGGAAATGAACAAACT
CTGGGTTAGAATGCAACATCAGGGACCTGCTCTGGAAAAGATGAAACGCGAAAAAGAAAG
GAGCGAGCTTCGTGATCTCGTCGGGAAAAATCTGCATGTTCTCAGTCAAATTGAGGGTAT
TGACCTTGAGATGTACAAAGAGACGGTGCTTCCAAGAATTTTAGAGCAGGTTGTCAACTG
TAAAGATGAGATTGCTCAGGGCTATTTGATGGATTGCATAATTCAAGTCTTCCCTGATGA
ATATCACTTACAAACTCTTGAAACCTTATTGGGTGCTTGTCCCCAGCTTCAGCCATCTGT
TGATATCAAAATGGTGCTTGCTCGGCTGATGGAAAGGCTCTCGAACTATGCTGCTTTAAG
TACAGATGTTTTACCTGAGTTTTTTCAAGTGGAAGCTTTTGCGAAACTAAACAGTGCCAT
AGGGAAGGTGATAGAAGCCCAAGAAAACATGCCTATAGCTGGAGTTGTGACTTTATATTC
ATCTCTTTTAACTTTTACTCTTCATGTCCACCCTGATCGTCTTGATTATGTGGATCAGAT
TTTGGGTGCATGTGTTAAGAAGCTTTCCGGTAAAGGAAAGCTCAAAGACAGTATAGCAAC
AAAACAGATTGTGGCCCTTCTAAGTGCTCCACTGGAGAAGTATAAGGATATTGATACTGC
ATTAAAGCTTTCAAATTATCCTCATGTTATGGAGCACCTTGATGATGCAACTAGCAAAGT
GATGGCTAATGTTTTAGTTCAAACTATTCTGAAAAATAAAACTTGCATCTCAACAGATGA
AAAGGTTGAGGCTCTTTTTGAATTAATGAAAGGACTTATCAGAGATTTGGATGAGAATCT
TCACGATGAGACTAAGTTTCTTTGTCCTCCATTTAAGTTTGATGAAGAAGATTTCAAGGA
AGAGCAGAACTCTGTTTCACGACTTATTCAAATGCTTCACAATGACGACCCTGAGGAGAT
GCTGAAGATAATTTGCACCGTGAAGAAGCATATTGTGACAGGAGGACCAAAGAGGCTTCC
CTTTACAGTTCCTCCCCTCATTTTTAATTCTCTTAAGTTGGTAAGGCGACTGCAAAACCA
AGATGAAAATGCTCCAGAGGAGGAAACATCTGCTATACCTAAGAAAATTTTTCAGATTTT
AAATCAGATAATTGAGGCTCTCTCAAGTGTTCCAGTACCTGAGCTAGCACTAAGGTTGTA
CCTAGAGTGTGCTGAGGCTGCCAATGACTCTGACCTAGAGCCTGTTGCCTACGAATTCTT
CACCCAAGCTTATATACTATACGAGGAAGAAATTTCGGACTCTAAAGCACAGGTGACCGC
AATACAATTAATAATAGGTACTCTTCAGAGAATGCACATCTTTGGTGTTGAGAACAGGGA
CACGCTAACGCACAAGGCTACAGGGTACTCCGCAAAACTCCTGAAGAAGCCTGATCAGTG
CAAAGCTGTCTACTCTTGTGCTCATCTTTTCTGGGTTGATGACCAGGACAGCATCAAGGA
TGGAGAGAGGGTTTTGCTTTGTTTAAAACGAGCCTTAAGGATTGCAAATGCTGCTCAACA
AATGTCGAATGCAACCCGAGGCAGCAGTGGATCAGTCTTGCTCTTTATAGAAATTCTAAA
CAAGTATTTATATTTCTATGAGAAGGGTGTCACACAGATCACTGTTGCATCCATCCAGAG
CCTACTCGAGCTAATAACAACTGAAATGCAAAGTGAAAATAAAACAGCCGATCCTGCTGC
AGACGCTCTGCTTGCAAGCACATTGCGCTATATCCAGTTCCAGAAGGATAAAGGTGGCGC
AGTTGGTGAGAAATATGATTCCATTAAGTCTTAACGACAAAAGGACACATTTTCTTGCAA
GGAGTTGCCATTCTTGATGTTACAGAAGCAGATAATTTTTCCCCCAATACAAGTTCTTTA
TTAGTTTTATTATTTGCCTGTTAGTCGAGATTCTGCGTTTTTTCAGCAGGCTAGCGGAAG
AAGCTGCAAATATCTGTATATACTAACCACTCTGCGATGGGTTATACTTTAGATTTTGAT
TGTTGTAACAATTCTCTCGCATAAAAATCTCTGTAAATTTGAGACTATATGGAGCAGATT
TATCTTGTGATTGTGAATAAATTGCTGGACTATGTTTGCTTGGAGGTGCATAGTCAAATG
CAATAGCTCTATGTTGTTTACCAACATGAGGGCTAACGACATTTGATTTTCATT