Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g033340.3.1
CDS Infomation

Phosphatase 2C family protein (AHRD V3.3 *** A9PFH7_POPTR)
Sequence

ATGTTATCAAGGCTGATAAATTTCCTGAAGGCCTGTTGGCGGCCATCGTCAGATCATTCT
GTACATGCTGGTTCGGATGCAGCTGGACGACAAGATGGACTTTTTTGGTATAAGGATAGT
GGTCAACACTTGATTGGTGAGTTCTCAATGGCAGTTGTACAGGCAAATAATTTGCTGGAA
GATCAAAGCCAGATCGAGTCGGGTCCTTTGAGCTTACTTGATTCTGGCCCTTATGGAACG
TTTGCTGGGATATACGATGGTCATGGTGGACCGGAGACATCACGGTATATCAATGATCAC
CTTTTTCAGAATCTCAAGAGGTTTGCAGCAGAACAAAATTGTATGTCTGTAGATGTAATA
CGGAAAGCATTTCAAGCTACAGAAGACGGATTCTGCTCTGTGGTTGCAAAGCAATGGCCA
ATGAAGCCACAGATGGCTGCTGTGGGATCTTGCTGTCTGGTAGCGGTGATCTGCAATGGT
ATCCTGTATGTTGCTAACCTTGGTGATTCCCGAGCTGTTTTGGGAAGGCTTGTGAGGGCT
ACAGGGGAGGTTCTTGCCATCCAGCTATCAGCTGAGCATAACGCATGTTTCGAATCTGTC
AGACAGGAGTTGCATTCAATGCATCCAGATGACCCACAGATAGTGGTTTTGAAGCATAAC
GTATGGCGTGTAAAGGGTCTGATTCAGATTTCAAGATCTATTGGTGATATATACCTTAAA
AAGCCTGAATACAACAGGGAGCCGTTGTATGCAAAGTTTCGATTGCGTGAACCTTTTAAA
AGGCCCATATTGAGCTCTGATCCATCAATTACTGTTCAAGAACTCGAACCACATGATCAA
TTTCTCATATTAGCTTCTGATGGTCTCTGGGAACATCTTTCCAATCAAGAAGCAGTTGAT
ATAGTACAAAATAGCCCCCGAAGCGGAAGCGCTCGGAGGCTAGTAAAAACTGCATTACAA
GAAGCAGCAAAGAAAAGGGAGATGAGGTATTCTGATCTAAAGAAGATCGATCGTGGTGTT
AGGAGGCATTTTCACGATGATATCTCAGTCATAGTTGTGTTTTTAGATTCAGATCTTGTA
AGTAAGGCGAGCTCGTTGAGGGGCCCCTCTTTATCTCTGAGAGGTGGTGGTATGAACTTT
GCAGCAAAAAGTTTGGCTCCCTGTGCTACTCCCATAGAACTCGGTACCACTTAA

Peptide Sequence

PEP ID

Solyc03g033340.3.1
PEP Infomation

Phosphatase 2C family protein (AHRD V3.3 *** A9PFH7_POPTR)
Sequence

MLSRLINFLKACWRPSSDHSVHAGSDAAGRQDGLFWYKDSGQHLIGEFSMAVVQANNLLE
DQSQIESGPLSLLDSGPYGTFAGIYDGHGGPETSRYINDHLFQNLKRFAAEQNCMSVDVI
RKAFQATEDGFCSVVAKQWPMKPQMAAVGSCCLVAVICNGILYVANLGDSRAVLGRLVRA
TGEVLAIQLSAEHNACFESVRQELHSMHPDDPQIVVLKHNVWRVKGLIQISRSIGDIYLK
KPEYNREPLYAKFRLREPFKRPILSSDPSITVQELEPHDQFLILASDGLWEHLSNQEAVD
IVQNSPRSGSARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVIVVFLDSDLV
SKASSLRGPSLSLRGGGMNFAAKSLAPCATPIELGTT*

Transcript Sequence

Transcript ID

Solyc03g033340.3.1
Transcript Infomation

Phosphatase 2C family protein (AHRD V3.3 *** A9PFH7_POPTR)
Sequence

TTTTTACTAGTAAAAAACAAGAGAGAGAAAAAGGAAACAAGAACTGGAAAAAAAGACTCA
ATCTTTACTGTGTAATAGTTGTTTGTTTTTGTGGTTATACAAAAGTTGCTGCTTTGATGG
ATCTATAGATCTAACAGTTTCAGACCCACATGGATTGTTATGTTTTATTCAGATCTTAGT
CATTATCAGTTGAAGGGGTTTCAGTTAACTGACCAGAAAAGAAAAGAAAAAGACAGTATA
ATAAGGCTTAAATTACACCATCGAAGTCTTCTTGTTCTTTATTTTTCAGCAGGATAAGAG
AGTATAATAACATAATTAGGCTTTTAGTTAGGCTGTTACTGCATTTTTTGTTTTGGTGTT
GAGAAACTGGAGGTAGGAAGAAGTGAAATGAAATGAGGGATGTTATCAAGGCTGATAAAT
TTCCTGAAGGCCTGTTGGCGGCCATCGTCAGATCATTCTGTACATGCTGGTTCGGATGCA
GCTGGACGACAAGATGGACTTTTTTGGTATAAGGATAGTGGTCAACACTTGATTGGTGAG
TTCTCAATGGCAGTTGTACAGGCAAATAATTTGCTGGAAGATCAAAGCCAGATCGAGTCG
GGTCCTTTGAGCTTACTTGATTCTGGCCCTTATGGAACGTTTGCTGGGATATACGATGGT
CATGGTGGACCGGAGACATCACGGTATATCAATGATCACCTTTTTCAGAATCTCAAGAGG
TTTGCAGCAGAACAAAATTGTATGTCTGTAGATGTAATACGGAAAGCATTTCAAGCTACA
GAAGACGGATTCTGCTCTGTGGTTGCAAAGCAATGGCCAATGAAGCCACAGATGGCTGCT
GTGGGATCTTGCTGTCTGGTAGCGGTGATCTGCAATGGTATCCTGTATGTTGCTAACCTT
GGTGATTCCCGAGCTGTTTTGGGAAGGCTTGTGAGGGCTACAGGGGAGGTTCTTGCCATC
CAGCTATCAGCTGAGCATAACGCATGTTTCGAATCTGTCAGACAGGAGTTGCATTCAATG
CATCCAGATGACCCACAGATAGTGGTTTTGAAGCATAACGTATGGCGTGTAAAGGGTCTG
ATTCAGATTTCAAGATCTATTGGTGATATATACCTTAAAAAGCCTGAATACAACAGGGAG
CCGTTGTATGCAAAGTTTCGATTGCGTGAACCTTTTAAAAGGCCCATATTGAGCTCTGAT
CCATCAATTACTGTTCAAGAACTCGAACCACATGATCAATTTCTCATATTAGCTTCTGAT
GGTCTCTGGGAACATCTTTCCAATCAAGAAGCAGTTGATATAGTACAAAATAGCCCCCGA
AGCGGAAGCGCTCGGAGGCTAGTAAAAACTGCATTACAAGAAGCAGCAAAGAAAAGGGAG
ATGAGGTATTCTGATCTAAAGAAGATCGATCGTGGTGTTAGGAGGCATTTTCACGATGAT
ATCTCAGTCATAGTTGTGTTTTTAGATTCAGATCTTGTAAGTAAGGCGAGCTCGTTGAGG
GGCCCCTCTTTATCTCTGAGAGGTGGTGGTATGAACTTTGCAGCAAAAAGTTTGGCTCCC
TGTGCTACTCCCATAGAACTCGGTACCACTTAAAAACTTTCTACTCTATTGTATACTCTG
CTGTGTCCTCAAAAACTTCCTCGTGGAGAGATTCGAAAAAAAACAATAGAAGGTGCACTA
ATTTATTCTTTTGATGTACAATGTTATATTTAACACGAAAACAGGTGCCTTGTTTAGTTT
TCGAGCAGCAAAAGAAGAACGAAAGAATTTACTGTAGAGATTGTTTCTCGAGTATGAACT
TGTCTTCTCTTACACTCCCTTTGATTCTTTAGTAAATGGTGTAAAATGACAGATGAAGAG
TAGATGTTATATACTTGTTATCGAAGCATTTCGTCCTACATCAACACAAGTATTTTGCTT
GTTTGTGGTATTAGTTTTTTTTTTTTTTTGCTTGGTGAATACTGATCAATGTTGAATTCT
CTGGTGAAATCTCCCTTTTATATTTATGTTAATTACCAACTATGTTGTTCGGTTTCTTCA
AAAATCATGAACCGGTGCAATGAGCACTATAATAGCTCAAAATTCTTTCTACAATGACCA
TACTGGATTACATAGGCTTCTCTATGATATGACAAACATAGAGGGTGAACCCTTATCAGT
AAGTATGAAAAAAACTAAAATAACCTTACAACTAACTATATACTGAGTAGAACCAAACCA
CCTATAGATCCCGTCTGCACAATGGACAGGAGCCATGTCTCAACAACCATGTATCGATGC
ATGGTAGGTGAAACATGTGATGACATTGTGGCAAACATCTAACAGTTTCCGCGAGTTGAA
AGTCCTGGATCACATCAGTCAATCAGAATGATACATATAAACAGGAAGAAAACAAACTGT
TGTTAAAACGAAATGT