Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g032210.3.1
CDS Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

ATGAATCAATTTTTCAAAAACTCAAGATTGGTTCTTGGGTTTTTCAGTTCCATTAAAATC
CACTCAAAAACTACAAAATTGAGTAGTAGGGAATGTAGCAATCTGTGTGAATCTTGGAAA
TCAATGGAGGGTTTTGCTAAATGTAGTGCAAATTTTGAACCATTGACACCTTTAAGTTTC
TTGGAAAGAGCAGCTAATGTTTTTAGGGATACAACTTCTGTTATTTATGGTGAAAAATTG
AAGTATAATTGGGAACAAACTCATAATAGATGTGTTAAACTTGCTTCTGCTCTAGTTCAT
TTGGGGATTTCTCATGGTGATGTGGTTGCAACTCTGGCTCCTAATGTACCGGCAATGCAA
GAGCTACATTTTGCAGTACCGATGGCTGGAGCCGTTCTTTGTACATTAAATACGCGACAT
GATTCAGCTATGTTATCGGTACTTCTGATGCATTCGGAAGCAAAGGTCATATTTGTGGAT
CAGAAATTGCTCGAAATTGCTCGAGGAGCATTAGCTCAACTTGCTGACAAGAAACAAAAT
CTGCCTCTTCTTGTTGTGATCTGTCAAACTGATGAATCCCCTGCTGTTGAAAACTTAAAC
CCTCGTGATCACGATTATGAAACTCTCCTCGGAAGTGGGGATAGCAATTTTGCTATAAGA
TGGCCGAGAACAGAATTTGATCCTATTAGTATTAACTATACTTCAGGTACAACGTCCCGA
CCCAAAGGAGTTGTTTACAGTCATAGAGGTGCGTATCTCAATACCATTGCCACTTTTTTG
CTCCACGAGATGAGTTCGTTCCCTGTTTATCTTTGGACTGTCCCGATGTTTCACTGCAAC
GGTTGGTGCATGATTTGGGGGCTTGCAGCGTTGGGTGGCACGAATGTTTGTCTTAGAAAT
GTCTCTCCTAAAGACATATTCGAAAACATTTCGTTGCACAAAGTCACAGATATGGGAGGG
GCACCAACTGTGTTGAACAAGATTGTGAATTCGCCCCCGTGTGATCTAAAGCCACTCCCT
CACAAGGTTAAAATAATGACAGGTGGTTCACCGCCTCCTCCGCGAGTTATTGCCAAAATG
GAGGAGCTAGGATTCAAAGTAAATCACTTATACGGACTAACAGAGACATACGGTCCAGGT
ACGTCTTGTTTGTGGAAGCCCGAGTGGGATTCTTTACCTCCTGACGAAAAATTTGTACTG
AAAGCAAGACAAGGAGTACAACATCTTTGCTTAAAAGAAGTCGATATACGAGATTCTACC
ACCATGGAAAAAGTGCCTGCTGATGGTAAAACAATTGGAGAGATCATGTTTAGAGGGAAC
ACAGTAATGAGTGGATACTTAAACGATACGAAAGCAACAGAGGAAGCTTTTAAAGGCGGA
TGGTTTCACAGCGGTGATCTTGCTGTGAAACACCCCGATGGTTATATAGAAGTTAAGGAC
CGGTTGAAAGACATTATTATCTCCGGTGGGGAAAACATAAGCACGGTTGAGGTGGAACGA
GTTTTGTATAGTCATCCAGCAGTTGTTGAAGCAGCAGTAGTCGCAAGACCAGATAACCAT
TGGGGGCAAACACCTTGCGCGTTTGTGAAGTTGAAGGAAGGATTCAGTGTTGACGATCAA
GAAATCATCAATTTTTGTCGAGATAATTTGCCTCATTACATGGCACCTCGGACAGTCATA
TTCGAAGATATCCCTAAGACTTCGACAGGGAAGATACAGAAATTTATCTTGAGGGAGAGA
GCGAACGCGTTGGGTAGTATTTTCTAG

Peptide Sequence

PEP ID

Solyc03g032210.3.1
PEP Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

MNQFFKNSRLVLGFFSSIKIHSKTTKLSSRECSNLCESWKSMEGFAKCSANFEPLTPLSF
LERAANVFRDTTSVIYGEKLKYNWEQTHNRCVKLASALVHLGISHGDVVATLAPNVPAMQ
ELHFAVPMAGAVLCTLNTRHDSAMLSVLLMHSEAKVIFVDQKLLEIARGALAQLADKKQN
LPLLVVICQTDESPAVENLNPRDHDYETLLGSGDSNFAIRWPRTEFDPISINYTSGTTSR
PKGVVYSHRGAYLNTIATFLLHEMSSFPVYLWTVPMFHCNGWCMIWGLAALGGTNVCLRN
VSPKDIFENISLHKVTDMGGAPTVLNKIVNSPPCDLKPLPHKVKIMTGGSPPPPRVIAKM
EELGFKVNHLYGLTETYGPGTSCLWKPEWDSLPPDEKFVLKARQGVQHLCLKEVDIRDST
TMEKVPADGKTIGEIMFRGNTVMSGYLNDTKATEEAFKGGWFHSGDLAVKHPDGYIEVKD
RLKDIIISGGENISTVEVERVLYSHPAVVEAAVVARPDNHWGQTPCAFVKLKEGFSVDDQ
EIINFCRDNLPHYMAPRTVIFEDIPKTSTGKIQKFILRERANALGSIF*

Transcript Sequence

Transcript ID

Solyc03g032210.3.1
Transcript Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)
Sequence

ATGAATCAATTTTTCAAAAACTCAAGATTGGTTCTTGGGTTTTTCAGTTCCATTAAAATC
CACTCAAAAACTACAAAATTGAGTAGTAGGGAATGTAGCAATCTGTGTGAATCTTGGAAA
TCAATGGAGGGTTTTGCTAAATGTAGTGCAAATTTTGAACCATTGACACCTTTAAGTTTC
TTGGAAAGAGCAGCTAATGTTTTTAGGGATACAACTTCTGTTATTTATGGTGAAAAATTG
AAGTATAATTGGGAACAAACTCATAATAGATGTGTTAAACTTGCTTCTGCTCTAGTTCAT
TTGGGGATTTCTCATGGTGATGTGGTTGCAACTCTGGCTCCTAATGTACCGGCAATGCAA
GAGCTACATTTTGCAGTACCGATGGCTGGAGCCGTTCTTTGTACATTAAATACGCGACAT
GATTCAGCTATGTTATCGGTACTTCTGATGCATTCGGAAGCAAAGGTCATATTTGTGGAT
CAGAAATTGCTCGAAATTGCTCGAGGAGCATTAGCTCAACTTGCTGACAAGAAACAAAAT
CTGCCTCTTCTTGTTGTGATCTGTCAAACTGATGAATCCCCTGCTGTTGAAAACTTAAAC
CCTCGTGATCACGATTATGAAACTCTCCTCGGAAGTGGGGATAGCAATTTTGCTATAAGA
TGGCCGAGAACAGAATTTGATCCTATTAGTATTAACTATACTTCAGGTACAACGTCCCGA
CCCAAAGGAGTTGTTTACAGTCATAGAGGTGCGTATCTCAATACCATTGCCACTTTTTTG
CTCCACGAGATGAGTTCGTTCCCTGTTTATCTTTGGACTGTCCCGATGTTTCACTGCAAC
GGTTGGTGCATGATTTGGGGGCTTGCAGCGTTGGGTGGCACGAATGTTTGTCTTAGAAAT
GTCTCTCCTAAAGACATATTCGAAAACATTTCGTTGCACAAAGTCACAGATATGGGAGGG
GCACCAACTGTGTTGAACAAGATTGTGAATTCGCCCCCGTGTGATCTAAAGCCACTCCCT
CACAAGGTTAAAATAATGACAGGTGGTTCACCGCCTCCTCCGCGAGTTATTGCCAAAATG
GAGGAGCTAGGATTCAAAGTAAATCACTTATACGGACTAACAGAGACATACGGTCCAGGT
ACGTCTTGTTTGTGGAAGCCCGAGTGGGATTCTTTACCTCCTGACGAAAAATTTGTACTG
AAAGCAAGACAAGGAGTACAACATCTTTGCTTAAAAGAAGTCGATATACGAGATTCTACC
ACCATGGAAAAAGTGCCTGCTGATGGTAAAACAATTGGAGAGATCATGTTTAGAGGGAAC
ACAGTAATGAGTGGATACTTAAACGATACGAAAGCAACAGAGGAAGCTTTTAAAGGCGGA
TGGTTTCACAGCGGTGATCTTGCTGTGAAACACCCCGATGGTTATATAGAAGTTAAGGAC
CGGTTGAAAGACATTATTATCTCCGGTGGGGAAAACATAAGCACGGTTGAGGTGGAACGA
GTTTTGTATAGTCATCCAGCAGTTGTTGAAGCAGCAGTAGTCGCAAGACCAGATAACCAT
TGGGGGCAAACACCTTGCGCGTTTGTGAAGTTGAAGGAAGGATTCAGTGTTGACGATCAA
GAAATCATCAATTTTTGTCGAGATAATTTGCCTCATTACATGGCACCTCGGACAGTCATA
TTCGAAGATATCCCTAAGACTTCGACAGGGAAGATACAGAAATTTATCTTGAGGGAGAGA
GCGAACGCGTTGGGTAGTATTTTCTAGAGTGAAATGAAGCAGCAGCACTTGGCTTTGCTG
AAAAATCTTAGTATCAATGTGTTGATAAATGTATCTTTGCATTCTCCTGCAAAGTGTTGG
TACATTCAACTAAAAATGGGAATTTTCCCTGTCTGAGTACTTGAAAAAATGAAATAGCAA
AATTCGATCCAATTTATCGTATGGAAGTTAACTTCCAAGT