Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g031940.3.1
CDS Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT1G21540.1)
Sequence

ATGGATATTTTAACACCAACTAGCTCTACAAAAAACCCATCTCTTCATTCTTGTAACTTA
TCATCCCTTAGCATATCCAATCCATTAGGTTATCAACTCTTTAAATCAAGAATCCCTTTT
GAAGTAAACAAGTTAAAGAAATGTACGATTCGATCTACGCTAGCCTTGAATTCTGTTATT
GCTCCTCCTGAAATTTTTAAAGAAAGTGAGAGTGTGACCACTAAAATATCGAAGGGGCCT
GCGAATACATGCCCGTTTTCGCCTTTGGACTTCTTAGAGAGGGCTTCTATTGTTTATGGA
AATTGCACATCAATTGTTTACAATGACACAAGTTACACTTGGTCACAAACTTACACTAGG
TGCAAAAAATTGGCTTCTTCGATTTCATCGCTAGGGATCAAGAAAGGCGATGTCGTTTCC
GTGTTATCCCCAAATATTCCGGCGATGTACGAGCTCCAATTCGCCGTGCCAATGTCCGGT
GCGATCCTCAACAACATAAATTTCCGCCTCGATCCACGTACCCTCTCCGTTTTGCTCCGG
CATAGCGAATCAAAGCTTGTATTTGTGGACTATCAAGCGAGTTCTTTATTACTCGAGGCG
ATTTCTCTATTCCCTTCTAATTTACAACGTCCTAAATTAGTCCTCATCGAGGATAATTGT
GGTGATACTCCTTTAGTATCGAGGAATGAGTTTTATAATAGTTATGAGAATGTTATTGAT
GAAGGGGACCAGCATTTCAAATGGATCGCTCCAGAGAGCGAATGGGAACCTATGACACTA
AACTACACTTCTGGGACTACTTATGCACCGAAAGGTGTGCTTCATAGTCATAGAAGTGCG
TTTACGATGAGTGTCATGGGCTTAATTGATTGGTCCGTCCCGAAGCAACCGGTGTTCTTG
TGGACCCTACCAATTTTTCATGCCAATGGTTGGGGTTTTTGTTGGGCTATGGCTGCTGTT
GGTGGAACCAATGTGTGTCTACGTCGGAGTCATGATGCTGCTTTAATATATGAAGCTATT
CAACAACATAAGGTAACTCACATGTGTGGTGCACCAGTAGTACTTAACATGTTATCAACC
TATACAAAAAGGAAACCCCTTGATTCCCCTGTCCAAATCCTAACGGCCGGGGCGCCACCC
CCGGCCGCAGTTTTGGACAGGACAGAATCATTGGGATTCGTGATAAGTCACGGTTATGGA
TTGACAGAGACGGGTGGGCCCGCGGTGACATGTGCATGGAAACAAGAATGGAATTCATTG
ACAAATTCAGAAAGGGCAACACTAAAATCAAGACAAGGTGTGAAGATGGTAGGGTTTACT
GATGTTGATGTAGTGGATCCTGAAACTGGCATTAGTATTGAGAGGAATGGAATGGCTGTT
GGAGAAATTGTTTTGAAAGGAGGTAGTGTGATGCTAGGGTACCTTAAAGACCCTGAAGGA
ACATCAAAATGCATGAAGAATGATGGATGGTTTTACACGGGAGACGTTGGAGTAATGCAT
TCAGATGGATATTTAGAAGTTAAAGATCGATCGAAAGATGTCATAATTTGTGGTGGCGAG
AACATAAGCAGTGTAGAAATTGAGTCGATTTTATACAAACACCCCGCGGTGAATGAAGCA
GCTGTAGTTGCACGTCCAGATAATTATTGGGGCGAAACCCCTTGTGTGTTCGTTAGTTTA
AAGAATGATGCGCGCAATGTGACCGAGAAGGAGTTGAGAGAATTTTGTAAAGAGAATTTA
CCTCTTTATATGGTACCAAGGACAGTTGTTATACAAGATGACCTTCCAAAGACTGCTACT
GGGAAAATTCAAAAGTACTTACTCAGGGATAAAGCTAAATCACTTATATAA

Peptide Sequence

PEP ID

Solyc03g031940.3.1
PEP Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT1G21540.1)
Sequence

MDILTPTSSTKNPSLHSCNLSSLSISNPLGYQLFKSRIPFEVNKLKKCTIRSTLALNSVI
APPEIFKESESVTTKISKGPANTCPFSPLDFLERASIVYGNCTSIVYNDTSYTWSQTYTR
CKKLASSISSLGIKKGDVVSVLSPNIPAMYELQFAVPMSGAILNNINFRLDPRTLSVLLR
HSESKLVFVDYQASSLLLEAISLFPSNLQRPKLVLIEDNCGDTPLVSRNEFYNSYENVID
EGDQHFKWIAPESEWEPMTLNYTSGTTYAPKGVLHSHRSAFTMSVMGLIDWSVPKQPVFL
WTLPIFHANGWGFCWAMAAVGGTNVCLRRSHDAALIYEAIQQHKVTHMCGAPVVLNMLST
YTKRKPLDSPVQILTAGAPPPAAVLDRTESLGFVISHGYGLTETGGPAVTCAWKQEWNSL
TNSERATLKSRQGVKMVGFTDVDVVDPETGISIERNGMAVGEIVLKGGSVMLGYLKDPEG
TSKCMKNDGWFYTGDVGVMHSDGYLEVKDRSKDVIICGGENISSVEIESILYKHPAVNEA
AVVARPDNYWGETPCVFVSLKNDARNVTEKELREFCKENLPLYMVPRTVVIQDDLPKTAT
GKIQKYLLRDKAKSLI*

Transcript Sequence

Transcript ID

Solyc03g031940.3.1
Transcript Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT1G21540.1)
Sequence

GGAAGGAGAAAAATAAACAAATTAAGCATACCTACATTATGGATATTTTAACACCAACTA
GCTCTACAAAAAACCCATCTCTTCATTCTTGTAACTTATCATCCCTTAGCATATCCAATC
CATTAGGTTATCAACTCTTTAAATCAAGAATCCCTTTTGAAGTAAACAAGTTAAAGAAAT
GTACGATTCGATCTACGCTAGCCTTGAATTCTGTTATTGCTCCTCCTGAAATTTTTAAAG
AAAGTGAGAGTGTGACCACTAAAATATCGAAGGGGCCTGCGAATACATGCCCGTTTTCGC
CTTTGGACTTCTTAGAGAGGGCTTCTATTGTTTATGGAAATTGCACATCAATTGTTTACA
ATGACACAAGTTACACTTGGTCACAAACTTACACTAGGTGCAAAAAATTGGCTTCTTCGA
TTTCATCGCTAGGGATCAAGAAAGGCGATGTCGTTTCCGTGTTATCCCCAAATATTCCGG
CGATGTACGAGCTCCAATTCGCCGTGCCAATGTCCGGTGCGATCCTCAACAACATAAATT
TCCGCCTCGATCCACGTACCCTCTCCGTTTTGCTCCGGCATAGCGAATCAAAGCTTGTAT
TTGTGGACTATCAAGCGAGTTCTTTATTACTCGAGGCGATTTCTCTATTCCCTTCTAATT
TACAACGTCCTAAATTAGTCCTCATCGAGGATAATTGTGGTGATACTCCTTTAGTATCGA
GGAATGAGTTTTATAATAGTTATGAGAATGTTATTGATGAAGGGGACCAGCATTTCAAAT
GGATCGCTCCAGAGAGCGAATGGGAACCTATGACACTAAACTACACTTCTGGGACTACTT
ATGCACCGAAAGGTGTGCTTCATAGTCATAGAAGTGCGTTTACGATGAGTGTCATGGGCT
TAATTGATTGGTCCGTCCCGAAGCAACCGGTGTTCTTGTGGACCCTACCAATTTTTCATG
CCAATGGTTGGGGTTTTTGTTGGGCTATGGCTGCTGTTGGTGGAACCAATGTGTGTCTAC
GTCGGAGTCATGATGCTGCTTTAATATATGAAGCTATTCAACAACATAAGGTAACTCACA
TGTGTGGTGCACCAGTAGTACTTAACATGTTATCAACCTATACAAAAAGGAAACCCCTTG
ATTCCCCTGTCCAAATCCTAACGGCCGGGGCGCCACCCCCGGCCGCAGTTTTGGACAGGA
CAGAATCATTGGGATTCGTGATAAGTCACGGTTATGGATTGACAGAGACGGGTGGGCCCG
CGGTGACATGTGCATGGAAACAAGAATGGAATTCATTGACAAATTCAGAAAGGGCAACAC
TAAAATCAAGACAAGGTGTGAAGATGGTAGGGTTTACTGATGTTGATGTAGTGGATCCTG
AAACTGGCATTAGTATTGAGAGGAATGGAATGGCTGTTGGAGAAATTGTTTTGAAAGGAG
GTAGTGTGATGCTAGGGTACCTTAAAGACCCTGAAGGAACATCAAAATGCATGAAGAATG
ATGGATGGTTTTACACGGGAGACGTTGGAGTAATGCATTCAGATGGATATTTAGAAGTTA
AAGATCGATCGAAAGATGTCATAATTTGTGGTGGCGAGAACATAAGCAGTGTAGAAATTG
AGTCGATTTTATACAAACACCCCGCGGTGAATGAAGCAGCTGTAGTTGCACGTCCAGATA
ATTATTGGGGCGAAACCCCTTGTGTGTTCGTTAGTTTAAAGAATGATGCGCGCAATGTGA
CCGAGAAGGAGTTGAGAGAATTTTGTAAAGAGAATTTACCTCTTTATATGGTACCAAGGA
CAGTTGTTATACAAGATGACCTTCCAAAGACTGCTACTGGGAAAATTCAAAAGTACTTAC
TCAGGGATAAAGCTAAATCACTTATATAAGCGTGAATTCAGATTAATCAGATAAAAGCGT
GAGTAGAAAAGAATTACTAAATGCTTGTTTAGTAAATAATAAATCATGAGTTTGTAAGCA
TTTATTTCTATCAAAATGAAACGAATATGAGCTGTGGTTCTTAGCTATGGGTTTCAAACA
TAGCTAAGAATTAAAATATTAGTATTTTCTAATATGTGTGATTTCTATATATTTACATGT
AT