Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g031820.3.1
CDS Infomation

tyrosyl-DNA phosphodiesterase-like protein (AHRD V3.3 *** AT5G15170.1)
Sequence

ATGTCCATCTCTTCTCAGGTTGGATTTTTGGTGCCTCTAAGTGATAATTTGGAAGAGGAT
GGGAAAAGTTCCATACCCAAGATTCCACTCTCAGAAGGTCCTAATTGTGTTGGACGGGAT
TGCATTCCAGTTACTGATAAGCGGCTGAGCCGCAAGCATCTTATTATCACTGCTACCTGC
ACTGGCTCTGCTGATGTTGTTGTGGAAGGAACAAATCCAGTTGTTATAAGATCAAAGGGT
GAGAGGAAGAAGCTTTTGTCTAGAGAGAGGTGGAAACTCGGAAGTGATGATATCATAGAG
TTGATACCTGGGCATTACCTATTTAAGTATGTTAGCGCAGCTTGTAAGGATGAAACTTCA
CCAGGTAACAAACAAAAAAGGCCTTTCAGTGAAGAAAGCATTACTGACAAAGGCCAGATG
CATGGCAAGAAGAAAGCTCGAGAAGTTTGTGAGGAAGCTTCAGAATTGATTATGTTGCAC
AACAATGGCCAAGAAACAAATAGTTCTGCAGAGGCCATACGTCAGTTTAGGGTTCCCAAA
CACAAGTTGCCCCTCACGTTCAGATTGATGAGAGTGCGTGAGCTGCCAGCATGGGCAAAT
TCAGAAGCTGTTTCTATTAATGATGTTATTCAGGGGAATGTGCTTGTAGCTATCCTCTCG
AATTACATGGTGGATATGGATTGGCTACTTTCTGCATGTCCAACTCTAAAACGGATTCCT
AATGTTCTCGTCATTCATGGAGAAGGTGATGGTACCATGGAATACATGAAGAGAAGCAAG
ATTGCAAATTGGATTCTGCACAAACCTTCTTTACCGATTGCATATGGAACACACCATTCA
AAAGCCATGCTTCTTGTCTATCCAACAGGAGTTAGAGTTATTATACATACTGCAAACTTG
ATCTCTATTGATTGGAATAACAAAAGCCAGGGATTGTGGATGCAAGATTTTCCCTGGAAG
AATCAAAACAATTTGGACAAGGATGGTGGATTTGAAAATGATTTGGTTGATTATCTAAGC
GCGTTAAAGTGGCCAGAATTTACTGTTAATATACCAGCCTTCGGAAGCTGCAAGATCAAC
TCCTCATTCTTCAAGAAATTTGATTACAGTAGCGCATCGGTCAGGCTAATTGCATCTGTG
CCTGGATATCATTCAGGTTCTAGTTTGAGGAAGTGGGGACATATGAAGTTACGTACTGTT
CTTCAGGAATGTACTTTTAGCAAAGAATTTCAGAAGTCTCCTCTTATATACCAGGTATCG
GTATCGTTTTCCTCCCTAGGTTCTTTGGATGAGAAATGGATGACGGAGTTTGCCTCTTCA
ATGTCAGCTGGAGTTACAGACGATAAAAAACCTCTGGGCATTGGGGAGCCAATGATAGTA
TGGCCCAATGTAGAAGATGTTAGATGTTCTTTGGAGGGATATGCAGCTGGAAGTGCCATT
CCCAGCCCATCAAAGAACGTGGAGAAAGAATTTCTGAAGAAATATTGGGCTAAATGGAAA
GCTAGCCACACTGGTCGTTGGTGGTTCTTGCTTACGTCATCAAACCTCAGCAAAGCTGCC
TGGGGCGCACTTCAGAAAAATAATTCTCAGTTGATGATTCGTTCCTATGAGCTAGGGGTG
CTATTTTTGCCGTCTTCTGTTAAACGTGGCTGTGGATTTTCTTGTACAAATAATGGTTAT
CCATCAGAGGACGAAACTAGCATACACGAAGGGAAAAAAATAAAGCTGGTAACTCTAGCT
TGGCAGGGAAAGGGAAATGATGATTCTTCTGAAGTAATCAAGTTACCAGTGGCTTATGAG
CTTCCTCCAAAACCGTATTCCCTTGAAGGGACGTCCCTACGAAGGTTGGAGGTGAAGATG
AAGGGACGTCCCTACGAAGGTTGGCCACCATGTTCGGGTCCTAATAAACATGAATATCTG
CTGGAATTTTGCATTCAAGGTTTGTTCGTCGTGCTTCTGAAAGCTAGGTTCATGTCTGAG
CTCGATATCCAAGTCCCTACCACCTTTGATCCGTTCGCTGATGCAAATGCTCAGAACTCA
GGCGCTGGTGCGAAGGAGTATGTGCATATCCGCGTTCAGCAGAGAAATGGAAGGAAAAGT
CTGACCACCGTTCAAGGCCTGAAGAAAGAATTCAGCTACAACAAGATTCTCAAGGACCTC
AAGAAAGAGTTCTGTTGCAATGGTACCGTTGTGCAAGATCCAGAACTCGGACAGGTTATC
CAGCTTCAGGGCGATCAGCGGAAGAACGTGTCAACCTTTCTCATACAGGCTGGCATTGTG
AAGAAGGATAACATCAAGATTCATGGTTTCTAA

Peptide Sequence

PEP ID

Solyc03g031820.3.1
PEP Infomation

tyrosyl-DNA phosphodiesterase-like protein (AHRD V3.3 *** AT5G15170.1)
Sequence

MSISSQVGFLVPLSDNLEEDGKSSIPKIPLSEGPNCVGRDCIPVTDKRLSRKHLIITATC
TGSADVVVEGTNPVVIRSKGERKKLLSRERWKLGSDDIIELIPGHYLFKYVSAACKDETS
PGNKQKRPFSEESITDKGQMHGKKKAREVCEEASELIMLHNNGQETNSSAEAIRQFRVPK
HKLPLTFRLMRVRELPAWANSEAVSINDVIQGNVLVAILSNYMVDMDWLLSACPTLKRIP
NVLVIHGEGDGTMEYMKRSKIANWILHKPSLPIAYGTHHSKAMLLVYPTGVRVIIHTANL
ISIDWNNKSQGLWMQDFPWKNQNNLDKDGGFENDLVDYLSALKWPEFTVNIPAFGSCKIN
SSFFKKFDYSSASVRLIASVPGYHSGSSLRKWGHMKLRTVLQECTFSKEFQKSPLIYQVS
VSFSSLGSLDEKWMTEFASSMSAGVTDDKKPLGIGEPMIVWPNVEDVRCSLEGYAAGSAI
PSPSKNVEKEFLKKYWAKWKASHTGRWWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGV
LFLPSSVKRGCGFSCTNNGYPSEDETSIHEGKKIKLVTLAWQGKGNDDSSEVIKLPVAYE
LPPKPYSLEGTSLRRLEVKMKGRPYEGWPPCSGPNKHEYLLEFCIQGLFVVLLKARFMSE
LDIQVPTTFDPFADANAQNSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDL
KKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLIQAGIVKKDNIKIHGF*

Transcript Sequence

Transcript ID

Solyc03g031820.3.1
Transcript Infomation

tyrosyl-DNA phosphodiesterase-like protein (AHRD V3.3 *** AT5G15170.1)
Sequence

CCAGTGCCTGCTTGCCCTGTTCTGCAAACTCCATAAGGGGAAGCTGGCAAAATTCGAAAC
CCCATTTCATAATACCTATTCAATGTCCATCTCTTCTCAGGTTGGATTTTTGGTGCCTCT
AAGTGATAATTTGGAAGAGGATGGGAAAAGTTCCATACCCAAGATTCCACTCTCAGAAGG
TCCTAATTGTGTTGGACGGGATTGCATTCCAGTTACTGATAAGCGGCTGAGCCGCAAGCA
TCTTATTATCACTGCTACCTGCACTGGCTCTGCTGATGTTGTTGTGGAAGGAACAAATCC
AGTTGTTATAAGATCAAAGGGTGAGAGGAAGAAGCTTTTGTCTAGAGAGAGGTGGAAACT
CGGAAGTGATGATATCATAGAGTTGATACCTGGGCATTACCTATTTAAGTATGTTAGCGC
AGCTTGTAAGGATGAAACTTCACCAGGTAACAAACAAAAAAGGCCTTTCAGTGAAGAAAG
CATTACTGACAAAGGCCAGATGCATGGCAAGAAGAAAGCTCGAGAAGTTTGTGAGGAAGC
TTCAGAATTGATTATGTTGCACAACAATGGCCAAGAAACAAATAGTTCTGCAGAGGCCAT
ACGTCAGTTTAGGGTTCCCAAACACAAGTTGCCCCTCACGTTCAGATTGATGAGAGTGCG
TGAGCTGCCAGCATGGGCAAATTCAGAAGCTGTTTCTATTAATGATGTTATTCAGGGGAA
TGTGCTTGTAGCTATCCTCTCGAATTACATGGTGGATATGGATTGGCTACTTTCTGCATG
TCCAACTCTAAAACGGATTCCTAATGTTCTCGTCATTCATGGAGAAGGTGATGGTACCAT
GGAATACATGAAGAGAAGCAAGATTGCAAATTGGATTCTGCACAAACCTTCTTTACCGAT
TGCATATGGAACACACCATTCAAAAGCCATGCTTCTTGTCTATCCAACAGGAGTTAGAGT
TATTATACATACTGCAAACTTGATCTCTATTGATTGGAATAACAAAAGCCAGGGATTGTG
GATGCAAGATTTTCCCTGGAAGAATCAAAACAATTTGGACAAGGATGGTGGATTTGAAAA
TGATTTGGTTGATTATCTAAGCGCGTTAAAGTGGCCAGAATTTACTGTTAATATACCAGC
CTTCGGAAGCTGCAAGATCAACTCCTCATTCTTCAAGAAATTTGATTACAGTAGCGCATC
GGTCAGGCTAATTGCATCTGTGCCTGGATATCATTCAGGTTCTAGTTTGAGGAAGTGGGG
ACATATGAAGTTACGTACTGTTCTTCAGGAATGTACTTTTAGCAAAGAATTTCAGAAGTC
TCCTCTTATATACCAGGTATCGGTATCGTTTTCCTCCCTAGGTTCTTTGGATGAGAAATG
GATGACGGAGTTTGCCTCTTCAATGTCAGCTGGAGTTACAGACGATAAAAAACCTCTGGG
CATTGGGGAGCCAATGATAGTATGGCCCAATGTAGAAGATGTTAGATGTTCTTTGGAGGG
ATATGCAGCTGGAAGTGCCATTCCCAGCCCATCAAAGAACGTGGAGAAAGAATTTCTGAA
GAAATATTGGGCTAAATGGAAAGCTAGCCACACTGGTCGTTGGTGGTTCTTGCTTACGTC
ATCAAACCTCAGCAAAGCTGCCTGGGGCGCACTTCAGAAAAATAATTCTCAGTTGATGAT
TCGTTCCTATGAGCTAGGGGTGCTATTTTTGCCGTCTTCTGTTAAACGTGGCTGTGGATT
TTCTTGTACAAATAATGGTTATCCATCAGAGGACGAAACTAGCATACACGAAGGGAAAAA
AATAAAGCTGGTAACTCTAGCTTGGCAGGGAAAGGGAAATGATGATTCTTCTGAAGTAAT
CAAGTTACCAGTGGCTTATGAGCTTCCTCCAAAACCGTATTCCCTTGAAGGGACGTCCCT
ACGAAGGTTGGAGGTGAAGATGAAGGGACGTCCCTACGAAGGTTGGCCACCATGTTCGGG
TCCTAATAAACATGAATATCTGCTGGAATTTTGCATTCAAGGTTTGTTCGTCGTGCTTCT
GAAAGCTAGGTTCATGTCTGAGCTCGATATCCAAGTCCCTACCACCTTTGATCCGTTCGC
TGATGCAAATGCTCAGAACTCAGGCGCTGGTGCGAAGGAGTATGTGCATATCCGCGTTCA
GCAGAGAAATGGAAGGAAAAGTCTGACCACCGTTCAAGGCCTGAAGAAAGAATTCAGCTA
CAACAAGATTCTCAAGGACCTCAAGAAAGAGTTCTGTTGCAATGGTACCGTTGTGCAAGA
TCCAGAACTCGGACAGGTTATCCAGCTTCAGGGCGATCAGCGGAAGAACGTGTCAACCTT
TCTCATACAGGCTGGCATTGTGAAGAAGGATAACATCAAGATTCATGGTTTCTAAACACA
ATCAAAGAGAGGGGATTGATGCACATTTTGTGATTGCAACATTCACTGTTTGTTTACATT
ACATCAAGCGCGCTACGAGCAACGTTTTTCTTCAATATATATATGGCAGAAGCTTGGTAT
ACTAGTAGCTTGTTGATGATCAGTATATATCAAAAGTTGTATGGTGAATCCCCAATGGAG
ATGGAGAATCAGCCCAAAAGTTTACAAGATCATTATATTCTATTTTGGATGAACATTATA
GTATTTGTCATTTTGTATATAGTTTACTTATACGATCAATATACATTTGCTTATTTCATG
AGCTTCTTGTTGGTGCTTAATGTATTAACTATTTCGTCCGTTTCAATTTGTTTGGTTGGT
TGTGACTTGGTTGTGCCGTGCAGACTCTTCACTTCTGATGTTGTAGTCATGTTGGTGTTT
GCAAAAAAG