Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g026150.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G63530.2)
Sequence

ATGAGTAACAGCTTGTTACATAGTCATTATTCGAGTGGTGGAATCCCATCAGAGATTGCT
GAGAATCTAAAAGATTTTTTTCCTGAGGATGGCGATTTGAGTTATGAAGAAGTTCTTTTG
CAACAGGAAACTGTTTACTTATCATTTCAAGCAAATGGAAAAAACAAGAGTATGAGCTCT
GAATACGGTCAAACCAGTAGCGGGCATCCGTTATCAGCACAAAAGGGTGATTCTTCTCAA
AGCCCTGACTCACAGTTGGCTCTGGATGAAGCTATAGCTAGATCTTTGCAGTTGGGGGAT
GATTTTGAGGATTTTTGTAGAGATGAGCTTAATTCTACTGTGGCTGGCATCAGGGAATCC
CCTCCTAGAGAATCACCTCCGGCTGAGAATCCGAACACGAGGAGACAAGATGATATTGAT
CCAGATAGTATGACCTATGAGGAATTGCAGTCTTTAGGAGAAGCTGTTGGCCAGCAGAGC
AGAGGGCTTTCACAAGACCTCATAAGTCGTTTACCAAGTTTCAAATACAAGACTGGATTC
TTCTCAAAGAAAAAGAAGATGGGAGAGTGTGTTATATGTTATGCTGCATACAGAAGCGGA
GATATGTTGACCACTTTGCCTTGTGCACACATGTTTCATTCAGAATGTATTAACCGCTGG
CTAAAAGAAAGAAAGAATTGCCCCCTCTGTTATGAAGAGGTGAAAGATGAATGA

Peptide Sequence

PEP ID

Solyc03g026150.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G63530.2)
Sequence

MSNSLLHSHYSSGGIPSEIAENLKDFFPEDGDLSYEEVLLQQETVYLSFQANGKNKSMSS
EYGQTSSGHPLSAQKGDSSQSPDSQLALDEAIARSLQLGDDFEDFCRDELNSTVAGIRES
PPRESPPAENPNTRRQDDIDPDSMTYEELQSLGEAVGQQSRGLSQDLISRLPSFKYKTGF
FSKKKKMGECVICYAAYRSGDMLTTLPCAHMFHSECINRWLKERKNCPLCYEEVKDE*

Transcript Sequence

Transcript ID

Solyc03g026150.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G63530.2)
Sequence

GATGAAGCTTTTATCCCCAAAAATCAAACAAAAAGGCAAAAAGGCTATGTAAGCAGGATT
TGTATCTTCTTTGTGAAGAAGGGAAAAGTTTTCACTGTTGTGGCTTCTTCTGAAACTTAC
CATGAATAGCACCATTATACACCAGTACCATTTTTCATAAAGCAAAGTGGACCCCTTAAT
GTCTACCTTCCTTAGATATAATATTCATCGGTTCCTTTCATTCGACCTATTTTACAGTCT
ACAGTTACAAAGATGAACTCACAGTCAAGAACCCCAACTCGTCTTCTTTCCTCAAAAAGA
GAGTGAAAGGATCCTGCAGTCTGAAGAAGAATAGTGTGAAATCGTACCTGAAACATTTAC
AATGAGTAACAGCTTGTTACATAGTCATTATTCGAGTGGTGGAATCCCATCAGAGATTGC
TGAGAATCTAAAAGATTTTTTTCCTGAGGATGGCGATTTGAGTTATGAAGAAGTTCTTTT
GCAACAGGAAACTGTTTACTTATCATTTCAAGCAAATGGAAAAAACAAGAGTATGAGCTC
TGAATACGGTCAAACCAGTAGCGGGCATCCGTTATCAGCACAAAAGGGTGATTCTTCTCA
AAGCCCTGACTCACAGTTGGCTCTGGATGAAGCTATAGCTAGATCTTTGCAGTTGGGGGA
TGATTTTGAGGATTTTTGTAGAGATGAGCTTAATTCTACTGTGGCTGGCATCAGGGAATC
CCCTCCTAGAGAATCACCTCCGGCTGAGAATCCGAACACGAGGAGACAAGATGATATTGA
TCCAGATAGTATGACCTATGAGGAATTGCAGTCTTTAGGAGAAGCTGTTGGCCAGCAGAG
CAGAGGGCTTTCACAAGACCTCATAAGTCGTTTACCAAGTTTCAAATACAAGACTGGATT
CTTCTCAAAGAAAAAGAAGATGGGAGAGTGTGTTATATGTTATGCTGCATACAGAAGCGG
AGATATGTTGACCACTTTGCCTTGTGCACACATGTTTCATTCAGAATGTATTAACCGCTG
GCTAAAAGAAAGAAAGAATTGCCCCCTCTGTTATGAAGAGGTGAAAGATGAATGACCTTG
CAGATCCAATGCGTTGTTGCTCAACTGATCTGCCTTCAAACATCACTTTTCTTTCATGTA
ATAGAGAGTATCAGCCTCCTTTAAGGACTTATATTTGGTTTGTAAATATCCTTGTGGTTT
GATTCCCCATATTTCACTATCTGGACACATTAAGCAAACAGAACTGTCTAGTCCTGCTCT
TGGTATCAGCATATCTTGCTAGACATTGACTTTTCAACATTATGCCCCTAAACTATGTGA
AATTAAGCGGATATGTACGTAGTGGTAATACTTTAGCACAAATATCCAATATT