Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g025970.3.1
CDS Infomation	Methyl-CpG-binding domain-containing 13-like protein (AHRD V3.3 *** A0A0B0PUU8_GOSAR)
Sequence	ATGGGGAAGAAAAGGGGTTTGCCCAATTGGGTTCCTGATGGGTGGAAGGTGGAGGTTAGA ACACGCAAAGGAAAGAAAGAAAAGTGGTATATTGATCCCTCAAAAGGACTCAAATTCTGC TCCAAGGCGGACGTTCTTCACTATCTTAGCAGTGTTGACAGTAATTGTTCTAAGAGTTCT AATACGAAGGAAATGGAGAATAAAGGCACCAATAAGTGTTTTATTGAGAAGACTGCATCA GAAGGGTTGCCACCAGGATGGATTAAGGAATTGAAGGTCAGGAAAAAGGGACGCAAAATC AGGAAAGACCCGTATTATATTGATCCTGTCAGTGGACAAACTTTCCGCTCTTTGAAGCAA GTTTCTCGGTTCCTTGAAACTAGAGAGCCAGGAAGGTTTGAATCCAAGCCCGATGATAAA TGTCCTGACACATTAGAACTTGAAGAACCTTCTTCTTTGTTTCCTGCTGAAGCTGACGAG CAGATATCACTAGACTGTGATGCATCTTGCAAGGAAGTTAATTCGAACCAGAAGCTGAAG TTGGGTGCTGAACATATGGCACATTCCAGTTGTGTAGAAGGCAGTATGTCATCCTGTGAA GGTTTAGGAGATGCTGTAGCAGAGAATGCGGCAGAGGAGAAAATTGATAAAGTTGTTTCA GATCCTGCTATTGAAGAACATCGAGAAAAGGACGATGATGGGGAAGTTGTCTCGAATACT GTTAGTGGAGGACATCAAGAAAAGGAGGATATTGGTAAAGTTATCTTGGCTACAGCAAGT GGAGAGCATCAAGAGGAGGATGATGATGGTAAAGTTATCTCGGCTACAGCAAGTGGAGAA CATCAAGAAAAAGAGGATGATGGTAAAGTTGTCTCGAAAACTGTAAATGGAGAAAATCAA GACAAGCCATCACTAGACGGAGTGGAAAAGCATGACCAGAAAACATTTCAACGGAAAAGA AAAAAGGGTATGAACATGCCTAGCAGAGCATCAAAACGGCTTGCTGGTATTAAAGCTGAT ACATCTCTTAAGCTCCAAACAAATGATCAAACCCAGCTAACTTCAGTTAGACAGCAGGAG GGGACACAAGCTGCCACCTCCGATAACCCTTTGAATTTTACTAATACCAGTAAGCATGTT GCAAGTACAGTAACTGGTATAACCATCAACAAGAAGGTAGAAACTGGGAATCTGACCATT AAAAGGAAACAACATCTTGTTACTTCACCACAAACGGAGGGAGAGAAGAAGCCTTCTCCA GCTGAACCTGCAAAAACTGTCCTTGCTAGCTGTGATGTCGATAAGAAAGGTGAAACAGCT CTTGAATCATCTTTAAGTGATCTTTGGACGGACCCGTGCATAGAATTTGCTATAAAAACT CTAACCGGTACAATTCCAGTCATAAACGAAAAGAAACTGGATGAGATCCCGGGTTCTAGT TCTAGCAAGCCCTCTGTTAATACTCCTTCCTCTGTGGGCTTACCTTCTGATGAAATATGG GCAGATCCTTGCTTCATGTTTGCTGTCAAGACTCTTACTGGTGAAATACCGATAGGGGAC GAGTTATGCTCTCAGAAGATAGTCCAGCAGCAATGCACTTCATCACCAAACATCAGATTT GAAGAGTTTGGCCAGGCTAATCTACCGCGCTATGCAGCACCAGAAATGTCTTCATACAAG CAACAGCCTGCAGTAGCCCCTAATGCATACCAGAATCGTTGGTTCGCTAAATTCGGTTCT CATCGGCCTTCACCACTTTGTTAA

Peptide Sequence

PEP ID	Solyc03g025970.3.1
PEP Infomation	Methyl-CpG-binding domain-containing 13-like protein (AHRD V3.3 *** A0A0B0PUU8_GOSAR)
Sequence	MGKKRGLPNWVPDGWKVEVRTRKGKKEKWYIDPSKGLKFCSKADVLHYLSSVDSNCSKSS NTKEMENKGTNKCFIEKTASEGLPPGWIKELKVRKKGRKIRKDPYYIDPVSGQTFRSLKQ VSRFLETREPGRFESKPDDKCPDTLELEEPSSLFPAEADEQISLDCDASCKEVNSNQKLK LGAEHMAHSSCVEGSMSSCEGLGDAVAENAAEEKIDKVVSDPAIEEHREKDDDGEVVSNT VSGGHQEKEDIGKVILATASGEHQEEDDDGKVISATASGEHQEKEDDGKVVSKTVNGENQ DKPSLDGVEKHDQKTFQRKRKKGMNMPSRASKRLAGIKADTSLKLQTNDQTQLTSVRQQE GTQAATSDNPLNFTNTSKHVASTVTGITINKKVETGNLTIKRKQHLVTSPQTEGEKKPSP AEPAKTVLASCDVDKKGETALESSLSDLWTDPCIEFAIKTLTGTIPVINEKKLDEIPGSS SSKPSVNTPSSVGLPSDEIWADPCFMFAVKTLTGEIPIGDELCSQKIVQQQCTSSPNIRF EEFGQANLPRYAAPEMSSYKQQPAVAPNAYQNRWFAKFGSHRPSPLC*

Transcript Sequence

Transcript ID	Solyc03g025970.3.1
Transcript Infomation	Methyl-CpG-binding domain-containing 13-like protein (AHRD V3.3 *** A0A0B0PUU8_GOSAR)
Sequence	ATGGGGAAGAAAAGGGGTTTGCCCAATTGGGTTCCTGATGGGTGGAAGGTGGAGGTTAGA ACACGCAAAGGAAAGAAAGAAAAGTGGTATATTGATCCCTCAAAAGGACTCAAATTCTGC TCCAAGGCGGACGTTCTTCACTATCTTAGCAGTGTTGACAGTAATTGTTCTAAGAGTTCT AATACGAAGGAAATGGAGAATAAAGGCACCAATAAGTGTTTTATTGAGAAGACTGCATCA GAAGGGTTGCCACCAGGATGGATTAAGGAATTGAAGGTCAGGAAAAAGGGACGCAAAATC AGGAAAGACCCGTATTATATTGATCCTGTCAGTGGACAAACTTTCCGCTCTTTGAAGCAA GTTTCTCGGTTCCTTGAAACTAGAGAGCCAGGAAGGTTTGAATCCAAGCCCGATGATAAA TGTCCTGACACATTAGAACTTGAAGAACCTTCTTCTTTGTTTCCTGCTGAAGCTGACGAG CAGATATCACTAGACTGTGATGCATCTTGCAAGGAAGTTAATTCGAACCAGAAGCTGAAG TTGGGTGCTGAACATATGGCACATTCCAGTTGTGTAGAAGGCAGTATGTCATCCTGTGAA GGTTTAGGAGATGCTGTAGCAGAGAATGCGGCAGAGGAGAAAATTGATAAAGTTGTTTCA GATCCTGCTATTGAAGAACATCGAGAAAAGGACGATGATGGGGAAGTTGTCTCGAATACT GTTAGTGGAGGACATCAAGAAAAGGAGGATATTGGTAAAGTTATCTTGGCTACAGCAAGT GGAGAGCATCAAGAGGAGGATGATGATGGTAAAGTTATCTCGGCTACAGCAAGTGGAGAA CATCAAGAAAAAGAGGATGATGGTAAAGTTGTCTCGAAAACTGTAAATGGAGAAAATCAA GACAAGCCATCACTAGACGGAGTGGAAAAGCATGACCAGAAAACATTTCAACGGAAAAGA AAAAAGGGTATGAACATGCCTAGCAGAGCATCAAAACGGCTTGCTGGTATTAAAGCTGAT ACATCTCTTAAGCTCCAAACAAATGATCAAACCCAGCTAACTTCAGTTAGACAGCAGGAG GGGACACAAGCTGCCACCTCCGATAACCCTTTGAATTTTACTAATACCAGTAAGCATGTT GCAAGTACAGTAACTGGTATAACCATCAACAAGAAGGTAGAAACTGGGAATCTGACCATT AAAAGGAAACAACATCTTGTTACTTCACCACAAACGGAGGGAGAGAAGAAGCCTTCTCCA GCTGAACCTGCAAAAACTGTCCTTGCTAGCTGTGATGTCGATAAGAAAGGTGAAACAGCT CTTGAATCATCTTTAAGTGATCTTTGGACGGACCCGTGCATAGAATTTGCTATAAAAACT CTAACCGGTACAATTCCAGTCATAAACGAAAAGAAACTGGATGAGATCCCGGGTTCTAGT TCTAGCAAGCCCTCTGTTAATACTCCTTCCTCTGTGGGCTTACCTTCTGATGAAATATGG GCAGATCCTTGCTTCATGTTTGCTGTCAAGACTCTTACTGGTGAAATACCGATAGGGGAC GAGTTATGCTCTCAGAAGATAGTCCAGCAGCAATGCACTTCATCACCAAACATCAGATTT GAAGAGTTTGGCCAGGCTAATCTACCGCGCTATGCAGCACCAGAAATGTCTTCATACAAG CAACAGCCTGCAGTAGCCCCTAATGCATACCAGAATCGTTGGTTCGCTAAATTCGGTTCT CATCGGCCTTCACCACTTTGTTAAGAATGATCATATGGTAGATTGTAACTTAATGTTAGG AAGTTCAGCCTAGCTTGTAGTAGTATATCATTATATAAACTAAAGTGCCTGAGCTAACAC AGGCTCAAATTTTTAAGCAGTAAAAACTATAATGTAAAAACATTAATCACATCTGTGTAA TTTTTGTCGTAAAACACTTATATAATATAAATTTGAAAACTTTTTCAACTGAATAAA