Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g025490.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G23340.1)
Sequence

ATGTCTAAGTCTCAAACTTCTGTAAAACTTCCCATTTTCGACATTTCGAGGCCATTGAGT
TCATCAAATTCCCTCAAGTCCCTTTCTTTAGCTTGTAAAGAATGGGGCTTTTTTCACATC
AGTAACCATGGAATTCCTAGAGATTTATGTAAACAACTTCGTTTCCTTTCTAACCAAATT
TTCGATCTCCCGTGTGATGTAAAGCTCAATGCTGGACCTTTATCAAATATAAGAACCTAT
ACTCCTCACTTCATTGCTTCCCCTTTCTTTGAAAGCCTCAGAGTGTCTGGACCTGACTTC
TTTGCTTCTGCACAGAGTACTTCCCAAGCCCTGATCAACCAGCCAATTCCAGAATTCAGT
CATGCAATGGAGGTATATGGGAGAAAAATGGTAGAAGTGTCCAAAAGCATTGTTGAGGTC
ATACTGATGAGCTTAGGTCCTGAATTTGAGCGAAAATTCGCATCGGAATTCAAGAACTGT
CATGGCTATCTAAGAGTAAACAGCTATACTCCACCCGAAAGCACTGACGATGTACAAGAA
GAAGAAGAAGTTGAAGGGCTAGGGATGCACACTGATATGAGCTGCATAACAATAGTATAT
CAAGATGAAGTTGGTGGACTTCAAGTGAGATCCAAAGAAGGCAAGTGGATGGATATTGAT
CCTTGCCAAGACACACTTGTTGTGAATATTGGAGATCTATTGCAGGCTTGGAGTAATGGG
AAATTGAGGTCATCTGAACACAGAGTTGTTTTGAAAGAGCCTGTGAGTCGATTTTCCATC
GCGTTCTTTTGGTGCTTTGAAGATGAGAAACTGATTGTTGCACCACAAGAGATTGTGGGG
AAGGGAAATTTGAAGGTCTATAAACCTTTTGTTTGTGCTGATTATTTGAAGTTTAGAGAA
AGCAATGAGAAAGGCAAGTTTGAGAAAGTTGGTTTCACTGTCAAACATTTTGCAGCTAAA
TAG

Peptide Sequence

PEP ID

Solyc03g025490.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G23340.1)
Sequence

MSKSQTSVKLPIFDISRPLSSSNSLKSLSLACKEWGFFHISNHGIPRDLCKQLRFLSNQI
FDLPCDVKLNAGPLSNIRTYTPHFIASPFFESLRVSGPDFFASAQSTSQALINQPIPEFS
HAMEVYGRKMVEVSKSIVEVILMSLGPEFERKFASEFKNCHGYLRVNSYTPPESTDDVQE
EEEVEGLGMHTDMSCITIVYQDEVGGLQVRSKEGKWMDIDPCQDTLVVNIGDLLQAWSNG
KLRSSEHRVVLKEPVSRFSIAFFWCFEDEKLIVAPQEIVGKGNLKVYKPFVCADYLKFRE
SNEKGKFEKVGFTVKHFAAK*

Transcript Sequence

Transcript ID

Solyc03g025490.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G23340.1)
Sequence

AGAATAAAGAGAAAGAAATATAAAATATGTCATCAGGGGTCTATGGGAAGAGAGAAAAAA
AAATTGTCAATGTCCTCGATTGCATATAAATTATGTGTTTTGCTTAATTGTCGTGTTTGC
TCGACAGACTCATGAATCACGAGTTAACCAAGTCAAACCTTGACATTGAAGAAAACCAAA
AAACCGATTCGATAAAAAATTATTTACATTCGATATTTGATATTAAATAAATATATTTGC
ACATAATTAACAATCGATAGGTGATATGTATCTTATTTTTTGAATTTTTAAATAGTAATT
ATGATGATTAATTATTTAATTCGACGTAAATATCGTATATTTTTTTGTTATAACAAGCAC
TCTTCCATCAAATGTGCTTGTTGCCTCCTAATTGTCTACAGTGTCTTAAATTCATCCTCC
AATTTTATTGACCATATTTTTTATGAAAAAAAAAAAATAAAGGAGTGCTATGGGGTTGGT
GGGGGTGGGGGTGGGGGTTAGAGTCGGCAAACACTAAACAGAAATTGTCAAACCTTAATA
AATTGCAAAATGTCATTAGTAATATACTTACTAGTAGCTTGCAAAATATTATTTTCAAGT
ACACGTTACATGCCTTATATTCTGCAATAATTATTTGTTCTCATTTCTTATTACTTGTTT
TCACATCTGTCTTTTCCACATCCCTAATGTAGCAATTGAGATTCTTCTTTGCGTCACTTG
TGACGCAGAGTCTTTTGGCGTGAGGTATAAGGTATAATAATCTCACATTTGGTTGGTTTT
GAATTATTTATCATATTATTTTTTCGACAATGGCGGAATAACTTATCCAGGGATAACTTG
TTCCCAACGGAACAAATTCGTTAGCTTTAGAGTCAGTGAGTTGAGAATGAATACAACCAA
GCACGAATTGCTTAATAGTTTATACATAGTTAACTGAAAGGATACTCTTTCCAAGATATA
GCTGCACTTCTATATAACTACATAAACACAACAGAAAGGAGTAAACAGAAGAAACTAACT
TTATCTCCTGAGCATGTCTAAGTCTCAAACTTCTGTAAAACTTCCCATTTTCGACATTTC
GAGGCCATTGAGTTCATCAAATTCCCTCAAGTCCCTTTCTTTAGCTTGTAAAGAATGGGG
CTTTTTTCACATCAGTAACCATGGAATTCCTAGAGATTTATGTAAACAACTTCGTTTCCT
TTCTAACCAAATTTTCGATCTCCCGTGTGATGTAAAGCTCAATGCTGGACCTTTATCAAA
TATAAGAACCTATACTCCTCACTTCATTGCTTCCCCTTTCTTTGAAAGCCTCAGAGTGTC
TGGACCTGACTTCTTTGCTTCTGCACAGAGTACTTCCCAAGCCCTGATCAACCAGCCAAT
TCCAGAATTCAGTCATGCAATGGAGGTATATGGGAGAAAAATGGTAGAAGTGTCCAAAAG
CATTGTTGAGGTCATACTGATGAGCTTAGGTCCTGAATTTGAGCGAAAATTCGCATCGGA
ATTCAAGAACTGTCATGGCTATCTAAGAGTAAACAGCTATACTCCACCCGAAAGCACTGA
CGATGTACAAGAAGAAGAAGAAGTTGAAGGGCTAGGGATGCACACTGATATGAGCTGCAT
AACAATAGTATATCAAGATGAAGTTGGTGGACTTCAAGTGAGATCCAAAGAAGGCAAGTG
GATGGATATTGATCCTTGCCAAGACACACTTGTTGTGAATATTGGAGATCTATTGCAGGC
TTGGAGTAATGGGAAATTGAGGTCATCTGAACACAGAGTTGTTTTGAAAGAGCCTGTGAG
TCGATTTTCCATCGCGTTCTTTTGGTGCTTTGAAGATGAGAAACTGATTGTTGCACCACA
AGAGATTGTGGGGAAGGGAAATTTGAAGGTCTATAAACCTTTTGTTTGTGCTGATTATTT
GAAGTTTAGAGAAAGCAATGAGAAAGGCAAGTTTGAGAAAGTTGGTTTCACTGTCAAACA
TTTTGCAGCTAAATAGTAGTCTTGGTTACTTGATTTGTAGCATTTTCTTTTGTATTAGTG
AGGTTAAAAACAATTATACTATTTTGGTAATGGAAGTTGTTTGTTGTCCTAGTTATGAAT
ACTATATACAGATACTTCTATTCTTGAGTTTATGT