Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g025430.1.1
CDS Infomation

LOW QUALITY:transmembrane protein (AHRD V3.3 *** AT5G52420.1)
Sequence

ATGTCAGGTGGAGTTGGTCCAAGTAGTGACATTCTTAAAGACGAAAACACTGAACAAATC
ATGAACAATTCCCAGAAAAAAACACAACAAAAAAACAGAGGATTTTTCACTTTTCGACAG
CTCAACGTCCTCGCCATCATAATCATCTTTTCTTCAAGTGGTATGGTGAGTATTGAAGAT
TTCTCCTTCGTTCTATTCTCCCTAATTTACATCTACTTCCTCTCCAAAACTGCCTTTCCC
CAAATCTCTCCTAAAACAGAGCAGCCCCCTGTTTTCGGCGAAAAAAACAGAGTACTAAAT
CTTTACGTTTCGATTGGAGCTCTGGTTGGGTTATTTCTCCCGATACTTTATATTTTCGAA
GGAATTTACGAGGGAGATAAAGAAGGTATCAAAGCAGCAGCTCCACATGTTTTCTTGCTG
GCTAGTCAAGTTTTCATGGAAGGATTAACGTTTACCGATCAATTTTCGCTGCCTGTAAGA
GTTTTTGTTCCGGTTTTTTACAATTCGAGGAGGATTTTTACGATTATGGAGTGGTTGAAG
ACTGAAATATCGAAAGTGGATGAAGAATATGGAGGGAATTTGAGGAGGGTGCATATGGGT
AGAGGATTAGCTACTGCTAATATGGTGTTTTGGTGTTTTAATTTGTTCTGTTTTTTGTTG
CCTGTGTATCTTCCTAAGGCCTTTAAGATATACTACTGTGGCCGCAAATCAAAAGATTGA

Peptide Sequence

PEP ID

Solyc03g025430.1.1
PEP Infomation

LOW QUALITY:transmembrane protein (AHRD V3.3 *** AT5G52420.1)
Sequence

MSGGVGPSSDILKDENTEQIMNNSQKKTQQKNRGFFTFRQLNVLAIIIIFSSSGMVSIED
FSFVLFSLIYIYFLSKTAFPQISPKTEQPPVFGEKNRVLNLYVSIGALVGLFLPILYIFE
GIYEGDKEGIKAAAPHVFLLASQVFMEGLTFTDQFSLPVRVFVPVFYNSRRIFTIMEWLK
TEISKVDEEYGGNLRRVHMGRGLATANMVFWCFNLFCFLLPVYLPKAFKIYYCGRKSKD*

Transcript Sequence

Transcript ID

Solyc03g025430.1.1
Transcript Infomation

LOW QUALITY:transmembrane protein (AHRD V3.3 *** AT5G52420.1)
Sequence

ATGTCAGGTGGAGTTGGTCCAAGTAGTGACATTCTTAAAGACGAAAACACTGAACAAATC
ATGAACAATTCCCAGAAAAAAACACAACAAAAAAACAGAGGATTTTTCACTTTTCGACAG
CTCAACGTCCTCGCCATCATAATCATCTTTTCTTCAAGTGGTATGGTGAGTATTGAAGAT
TTCTCCTTCGTTCTATTCTCCCTAATTTACATCTACTTCCTCTCCAAAACTGCCTTTCCC
CAAATCTCTCCTAAAACAGAGCAGCCCCCTGTTTTCGGCGAAAAAAACAGAGTACTAAAT
CTTTACGTTTCGATTGGAGCTCTGGTTGGGTTATTTCTCCCGATACTTTATATTTTCGAA
GGAATTTACGAGGGAGATAAAGAAGGTATCAAAGCAGCAGCTCCACATGTTTTCTTGCTG
GCTAGTCAAGTTTTCATGGAAGGATTAACGTTTACCGATCAATTTTCGCTGCCTGTAAGA
GTTTTTGTTCCGGTTTTTTACAATTCGAGGAGGATTTTTACGATTATGGAGTGGTTGAAG
ACTGAAATATCGAAAGTGGATGAAGAATATGGAGGGAATTTGAGGAGGGTGCATATGGGT
AGAGGATTAGCTACTGCTAATATGGTGTTTTGGTGTTTTAATTTGTTCTGTTTTTTGTTG
CCTGTGTATCTTCCTAAGGCCTTTAAGATATACTACTGTGGCCGCAAATCAAAAGATTGA