Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g025420.3.1
CDS Infomation

SKP1 family protein (AHRD V3.3 *** B9I474_POPTR)
Sequence

ATGGCGATCGTCAAACCAGAGATGAAGTCATATATCTGGCTCGAAACTGCTGATGGTTCA
ATCCAAGAAGTGGAGGAAGAGGTTGCCATGTTTTGCCCTGTGATATGCAGGGAATTACTT
CAAAATGGCAAGGGATCTTCGAAAAATTGTGCAATATTACTTCCTGAACGAGTCAATCCT
GCTAACTTAGAGTTAATACTGGAGTTTTGTCGGTTCCATCAAGTTCCTGGCCGTTCTAAT
AAGGAGCGCAAGAAACATGATGAGAAGTTTGTCCGGTTAGATACCAAGACGTTATGTGAT
TTGGCTTCTGCTGCTGACAGTCTTCAGCTAAGGCCTGTGGTTGACCTTACGAGCCGTGCA
CTTGCTCGGGTGATCGAAGGCAAAACTCCCGAGGAAATACGTGAAACTTTCCATTTGCCT
GATGATCTAACAGAGGAGGAGAAGTTGGAACCTTTGAGAAATATGACGGATGATCCACGT
ATCCGCCTTCTAAATCGACTCTATGCAAGAAAAAGGAAAGAATTATATGACAGAAAGAAA
CTAAAGAATGTTGATGTAGAAGAAGAGCCCCGCGTAGATGAAAGATCAGTTGATGATCTT
TTGTCATTCATAAATGGTGGAGATCAAGACTCAAAGGCTGCAAGAGTAACAAAAAATAAA
AAGAAATCTCGAGGAAGAAAAGAACAAGCTAGAAATTCGTCTTCAAATAATGAACCTGGA
AACAATAATAAGGAATCTAATTGCCTTACATCTGGCTGCTTAAATGGTGACACCAGTGAT
GGGTCTTCTCCAAGTAGAAATTCTGAGCTGCAAAACTCACCATCTGCAATGTTTTCATCT
AAGCTCGACTTGGATGATTTTGATATTGATGATGAGTTAGATCCAGCAAGGAAGGAAGAA
ATTGACAGGGAGGTTGAGGATTTTGCTCGGAGACTAGACTCTGTCTGGCCAGAAAGGATA
CAACAGATTTTGTCTTTGGGTCAGGAGAATAGACGGCTTACACCAATTTCCATGAACGGA
AATGGTTCCATGAAGAGATGTACAGCAGGTGTGGACCGGGGATAG

Peptide Sequence

PEP ID

Solyc03g025420.3.1
PEP Infomation

SKP1 family protein (AHRD V3.3 *** B9I474_POPTR)
Sequence

MAIVKPEMKSYIWLETADGSIQEVEEEVAMFCPVICRELLQNGKGSSKNCAILLPERVNP
ANLELILEFCRFHQVPGRSNKERKKHDEKFVRLDTKTLCDLASAADSLQLRPVVDLTSRA
LARVIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELYDRKK
LKNVDVEEEPRVDERSVDDLLSFINGGDQDSKAARVTKNKKKSRGRKEQARNSSSNNEPG
NNNKESNCLTSGCLNGDTSDGSSPSRNSELQNSPSAMFSSKLDLDDFDIDDELDPARKEE
IDREVEDFARRLDSVWPERIQQILSLGQENRRLTPISMNGNGSMKRCTAGVDRG*

Transcript Sequence

Transcript ID

Solyc03g025420.3.1
Transcript Infomation

SKP1 family protein (AHRD V3.3 *** B9I474_POPTR)
Sequence

CAGTAGGCTGAGGCTGTCTCTTCTCCTTCCTAAACCCAGCAGCAGCCACCATTCTTGTTG
AGAGACAGAGCCCTAAACGCCCAAATCTGCTAAACCACCATTGACAGTCAGGGGGCCTTA
TTATCAGGTAAACAAACCTAAGCAATTACAGAAACTACTTGTCTTTCAATCGAGAAAGAA
ATAACAAAGACAAAAAAGAAGAAAAAAAAATCAAGAAAAAACGTCGAGCCAAAAAAAGAA
AAGAAAAAAAAAATTCATTCTTCTCTTTTTCTTGCTAGTTTAAAACCCTACCTATTTCTC
TGGGATTTTTGTTTTAATCCTCCAGCTTTTATCTCTGTTGCGGCATAGATGACTGCATTG
TTTATTGAGGTGCATGTCTCGTTGGAATTCGGAGAGGTTTACTTACGATGGTTTGATTAT
GTTACTGATGCTTGTCTTCTAAAGGAATAAAGCTGCTGTCTTGTTCATAACATCGACACT
TTTAAGGTTGAAACTTTATTTATACCGTAGTTCTGAGAAGGCCAATAAACAGTTTTATCA
GATTTATCAGCTGATATCTGGAGGTCCTATGGCGATCGTCAAACCAGAGATGAAGTCATA
TATCTGGCTCGAAACTGCTGATGGTTCAATCCAAGAAGTGGAGGAAGAGGTTGCCATGTT
TTGCCCTGTGATATGCAGGGAATTACTTCAAAATGGCAAGGGATCTTCGAAAAATTGTGC
AATATTACTTCCTGAACGAGTCAATCCTGCTAACTTAGAGTTAATACTGGAGTTTTGTCG
GTTCCATCAAGTTCCTGGCCGTTCTAATAAGGAGCGCAAGAAACATGATGAGAAGTTTGT
CCGGTTAGATACCAAGACGTTATGTGATTTGGCTTCTGCTGCTGACAGTCTTCAGCTAAG
GCCTGTGGTTGACCTTACGAGCCGTGCACTTGCTCGGGTGATCGAAGGCAAAACTCCCGA
GGAAATACGTGAAACTTTCCATTTGCCTGATGATCTAACAGAGGAGGAGAAGTTGGAACC
TTTGAGAAATATGACGGATGATCCACGTATCCGCCTTCTAAATCGACTCTATGCAAGAAA
AAGGAAAGAATTATATGACAGAAAGAAACTAAAGAATGTTGATGTAGAAGAAGAGCCCCG
CGTAGATGAAAGATCAGTTGATGATCTTTTGTCATTCATAAATGGTGGAGATCAAGACTC
AAAGGCTGCAAGAGTAACAAAAAATAAAAAGAAATCTCGAGGAAGAAAAGAACAAGCTAG
AAATTCGTCTTCAAATAATGAACCTGGAAACAATAATAAGGAATCTAATTGCCTTACATC
TGGCTGCTTAAATGGTGACACCAGTGATGGGTCTTCTCCAAGTAGAAATTCTGAGCTGCA
AAACTCACCATCTGCAATGTTTTCATCTAAGCTCGACTTGGATGATTTTGATATTGATGA
TGAGTTAGATCCAGCAAGGAAGGAAGAAATTGACAGGGAGGTTGAGGATTTTGCTCGGAG
ACTAGACTCTGTCTGGCCAGAAAGGATACAACAGATTTTGTCTTTGGGTCAGGAGAATAG
ACGGCTTACACCAATTTCCATGAACGGAAATGGTTCCATGAAGAGATGTACAGCAGGTGT
GGACCGGGGATAGTGATGGAAATGGTGGACAAACGACAATGCGTTTTTTTTTGTATACAG
CTTGAGCTTAAAATGCCAGGTTGTCTGTCTATTGCAACAAAGAACTTTGGTATCCATATC
ATGTAAAGTTTCCTGTCAAGCTGCCAATAGCAAGTTCGCGTCCCTGGATACACGCCAGGT
TCTCAAAGTGTACTGAAATATCAGAATAGAAGGAAAGTTTCTGTTGTTTGTGACTATGGA
ATTTGCAAAACTTGTGCATTTCAAAAAAGCTGAGATTAACAGTTTCCAGTTTTGCACTAC
ATTCCTAGTTTCTTTTTAAACCATGGTTTTGATTTTTCCATCTTCTCTTTTAATTATATA
GTCCAAATGTTTGTTGTAACCTCCCATCCTTTTTTTGTTTCATTTTTTAATTTACCATAA
AAGGAATTTATCATGATCATACCCCCTCCCATGAAATTGCTTCATACCTAAAGGGATTTG
AAAATCATTGTGTAACGAAGTCTACTTGACCAGCACCAATGTATATGATGAACATAT