Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g019770.3.1
CDS Infomation

Testis-expressed sequence 2 protein (AHRD V3.3 *** A0A0B2Q462_GLYSO)
Sequence

ATGATGATCATGATGCTAGCAGTGTTTGTTCTTGGTGGGATATTTGTTCTTGCAGTGGAA
GCTGTAGGAATTGCTATTTTTATATGGTGGCTTATGAGAAGGGTTGATAAAGGAAAACAA
CCTCAAGGGTCTTTGTCTTTTGCTGGGGATATTGATCCATCTTTCTACAACAAGCAGGCA
GAGTATTCCAAGTATAATCTAGTACAGACCATTCTATGCACAACAGGAAGCTCCCAGAAT
GCCCAATCTTGCAGTGTTTTGGGAATAGTATGGGTTCTAGAATCTGAAAGAATCCTGAAA
GCATTAAACACGGACAAAGCTACAAAGCAGAACAAAGCCCAGAAAGAGATCTTAGAGGTA
ATACCTTCTCAAAAATTTGGAAAAATCAAGAATCACTCTCTCATCCTAATAGAATCGGAT
GGTTCCCATACTGAAATTCCACTCAAAGGTTGCATGGTTGCAGCTGTTTCTGCTTCAAGC
TTGTCCAGCAGAAAATGGGCGAAAAGATACCCAATTAAAGTTGAAAGTGGAGCATCTGCT
GTATATAAAGGAAGTAGAATATTTTACCTTTACCTGGAAACATCTTGGGAGAAGGAAGCA
TGGTGCAAAGCCCTTCGTCTTGCTTCCTGTGAGGATGAAGAAAAAATAAAATGGCTGGCA
AAGTTAAATGTAGAGTTCCAGAATTACCTGACGTCACTAAACGCAGCGTATCCTTCATTT
ATGAAACCATCTTCTAGTTTTGGTGCTGAAGTAGTTGATAAATCAAGTAAGCCAGATGGT
TCCTCGTCAAAAGTTCGTCAATTTCTAAAAAAGTTAACCAAGAAAGCTTCCAAGAATGCT
CCAGAAAATAAGGCAAGTAGCAGTTTAAAATTAGGCCCTGAAGAACGAAAGTTGATTGAG
AAAGGCCCTTCATTCCAAGACCTTGACTTGGCTAGTAGTGTCATGAAGGTTGCTCCAACA
AGAAAGCCTCTTGATTTTTCCAATGAGGATGTTATAGTGCCTTCATCTACTGGGTCTGTC
ATTTCTGATGCAGATTCTGAGGACAGGGTTATTGGTGATGAAGGATCCCTTTGTTGGAAT
TTGTTAATATCACGGTTGTTCTTTGATGCTAAAAGAAATGAGCAGATGAAAAGTTCTTTG
CAAGAACGGATTCAGAGAACCCTCTCCAATATTCGTAGCCCCAGTTACATAGGTGAAGTA
ACTTGTGCAGCTGTTAATGTTGGTGACCTCCCTCCCTATATACATGCAATGAGGGTTCTT
CCCTCAGATATGAACGAGCTCTGGGCTTTCGAAATTGATATTCAGTACTCTGGTGGTGCA
ATATTAGACCTTGAAACGAGGCTTGAAGTTCAAGACCTTGATTTACATGAGGGGGACGAA
GCAAGTTTAGATTCAAGTGTTGTTGATAACGTCAAATCAGATCTGTTAGAAGGTTATGAA
CGCTTCAGTGAACAATTTAAGCATTCCGACGAGAACGCAGATAAGATGGACCAAAGAAGT
GGTGGTGATATGCTTGCACGTAACTTTTCAACCGCAAGCAGAAGCTCTAATTGCTCTAGT
TGCTCACCTCCTGGATCTAAGTGGAAATCAATCTTACATTCTGTGGCCAAGCAGGTTTCA
CAGGTTCCACTCTCATTGGGGATCAGGGTTGCATCTCTACGAGGAACACTGAGGTTATAC
GTAAAGCCACCACCTTCAGATCAAATATGGTTTGGATTCACAGTGATGCCAGATATTGAT
ATCCATTTGAACTCTTCTGTTGGGGATCGTAAGATCTCAAGTGGACACCTTTTGTTGTTC
ATAACCAGTCGAATTAAGGCTGCTATTCGTGAATCTGTTGTGCTTCCAAACTGTGAGAAT
GTATGCATACCTTGGATGATAGCAGAAAAGGATGATTGGGTTCCCTTAAAAGATGCTCCC
TATATATGGATTCATAACAAATCTGCAGTTAATGCCAAGAAACAAGAATCAGATAGGAGA
AGTACCAGCAGTAATGCTGAAAGTGAACAAGAGAAACTGAACAGAGTTGGATGGGCTACT
CAAAAGAGTAAGTCCCTGGATCCACACTCTTTGTACTCAGCTCCTAAGGTCCAGCCTAGT
TTCAGAAGCCTCACTACAAGTCCAGAAAGAACACACCTTGAGTCTAAGAAACATCAGGGA
GAGACACTACCACGCAAGTCATCAGACCCACAGGTATATTTATCAGTTCATATGGGCCAG
TCTTCTGGAGCGGACTTGCATGCCCCTTTGTTGAGCCACAATGAACAGCTAGAGAGTCAC
CGCATGAGCACAGAGGAAAACATGCAAAGCTACTCACCTTCATCTTCTCATTCACTGAGT
ATGCTGGAGGAACAAAATAGTTCTACAGAAGATGAGATGAAGCCAAGAAGAACAAGTGCA
AGGGCTAAGATGCTTGGTTTGCGGAAAAAAATGGGGGAAAAGCTTGAAGAGAAGAAGCGT
CACATAGAAGAGAAGGGGAGACACTTGGTGACAAGGATGAGAAGCCACAAGGAATATTCG
TAA

Peptide Sequence

PEP ID

Solyc03g019770.3.1
PEP Infomation

Testis-expressed sequence 2 protein (AHRD V3.3 *** A0A0B2Q462_GLYSO)
Sequence

MMIMMLAVFVLGGIFVLAVEAVGIAIFIWWLMRRVDKGKQPQGSLSFAGDIDPSFYNKQA
EYSKYNLVQTILCTTGSSQNAQSCSVLGIVWVLESERILKALNTDKATKQNKAQKEILEV
IPSQKFGKIKNHSLILIESDGSHTEIPLKGCMVAAVSASSLSSRKWAKRYPIKVESGASA
VYKGSRIFYLYLETSWEKEAWCKALRLASCEDEEKIKWLAKLNVEFQNYLTSLNAAYPSF
MKPSSSFGAEVVDKSSKPDGSSSKVRQFLKKLTKKASKNAPENKASSSLKLGPEERKLIE
KGPSFQDLDLASSVMKVAPTRKPLDFSNEDVIVPSSTGSVISDADSEDRVIGDEGSLCWN
LLISRLFFDAKRNEQMKSSLQERIQRTLSNIRSPSYIGEVTCAAVNVGDLPPYIHAMRVL
PSDMNELWAFEIDIQYSGGAILDLETRLEVQDLDLHEGDEASLDSSVVDNVKSDLLEGYE
RFSEQFKHSDENADKMDQRSGGDMLARNFSTASRSSNCSSCSPPGSKWKSILHSVAKQVS
QVPLSLGIRVASLRGTLRLYVKPPPSDQIWFGFTVMPDIDIHLNSSVGDRKISSGHLLLF
ITSRIKAAIRESVVLPNCENVCIPWMIAEKDDWVPLKDAPYIWIHNKSAVNAKKQESDRR
STSSNAESEQEKLNRVGWATQKSKSLDPHSLYSAPKVQPSFRSLTTSPERTHLESKKHQG
ETLPRKSSDPQVYLSVHMGQSSGADLHAPLLSHNEQLESHRMSTEENMQSYSPSSSHSLS
MLEEQNSSTEDEMKPRRTSARAKMLGLRKKMGEKLEEKKRHIEEKGRHLVTRMRSHKEYS
*

Transcript Sequence

Transcript ID

Solyc03g019770.3.1
Transcript Infomation

Testis-expressed sequence 2 protein (AHRD V3.3 *** A0A0B2Q462_GLYSO)
Sequence

ATATATAATTACTCTATTTTTATATATTAATTATAATTTTAAATTATGTATATAATAACA
AAATAAATGAGTATGGACCTCAACTCCGTTTCTCGTGCAAGTCCAAGGTTGACGGATCTA
TCCTATACTAGTTTTAATTTTGTATCTCAAATTTCAACGTAAGAATAAAAAATAAAATAA
AAATGCGTAACTTTCGCCCAAAATATGTAAAATGGTTGCTTCTAAATACAGCAAACCTTT
AGCGCCCATTTCTCTGTTGCCCTGCATGACAGGAATCCTTGTATCCAATAACCATTTTTC
TCCCCCTTACATAGAATTTTGAAATTTCTCATGAATTTTCTTCTTCTTCTTCTTGGGGGA
GAAAGAAGATTAAGGATTAAAGATGATGATCATGATGCTAGCAGTGTTTGTTCTTGGTGG
GATATTTGTTCTTGCAGTGGAAGCTGTAGGAATTGCTATTTTTATATGGTGGCTTATGAG
AAGGGTTGATAAAGGAAAACAACCTCAAGGGTCTTTGTCTTTTGCTGGGGATATTGATCC
ATCTTTCTACAACAAGCAGGCAGAGTATTCCAAGTATAATCTAGTACAGACCATTCTATG
CACAACAGGAAGCTCCCAGAATGCCCAATCTTGCAGTGTTTTGGGAATAGTATGGGTTCT
AGAATCTGAAAGAATCCTGAAAGCATTAAACACGGACAAAGCTACAAAGCAGAACAAAGC
CCAGAAAGAGATCTTAGAGGTAATACCTTCTCAAAAATTTGGAAAAATCAAGAATCACTC
TCTCATCCTAATAGAATCGGATGGTTCCCATACTGAAATTCCACTCAAAGGTTGCATGGT
TGCAGCTGTTTCTGCTTCAAGCTTGTCCAGCAGAAAATGGGCGAAAAGATACCCAATTAA
AGTTGAAAGTGGAGCATCTGCTGTATATAAAGGAAGTAGAATATTTTACCTTTACCTGGA
AACATCTTGGGAGAAGGAAGCATGGTGCAAAGCCCTTCGTCTTGCTTCCTGTGAGGATGA
AGAAAAAATAAAATGGCTGGCAAAGTTAAATGTAGAGTTCCAGAATTACCTGACGTCACT
AAACGCAGCGTATCCTTCATTTATGAAACCATCTTCTAGTTTTGGTGCTGAAGTAGTTGA
TAAATCAAGTAAGCCAGATGGTTCCTCGTCAAAAGTTCGTCAATTTCTAAAAAAGTTAAC
CAAGAAAGCTTCCAAGAATGCTCCAGAAAATAAGGCAAGTAGCAGTTTAAAATTAGGCCC
TGAAGAACGAAAGTTGATTGAGAAAGGCCCTTCATTCCAAGACCTTGACTTGGCTAGTAG
TGTCATGAAGGTTGCTCCAACAAGAAAGCCTCTTGATTTTTCCAATGAGGATGTTATAGT
GCCTTCATCTACTGGGTCTGTCATTTCTGATGCAGATTCTGAGGACAGGGTTATTGGTGA
TGAAGGATCCCTTTGTTGGAATTTGTTAATATCACGGTTGTTCTTTGATGCTAAAAGAAA
TGAGCAGATGAAAAGTTCTTTGCAAGAACGGATTCAGAGAACCCTCTCCAATATTCGTAG
CCCCAGTTACATAGGTGAAGTAACTTGTGCAGCTGTTAATGTTGGTGACCTCCCTCCCTA
TATACATGCAATGAGGGTTCTTCCCTCAGATATGAACGAGCTCTGGGCTTTCGAAATTGA
TATTCAGTACTCTGGTGGTGCAATATTAGACCTTGAAACGAGGCTTGAAGTTCAAGACCT
TGATTTACATGAGGGGGACGAAGCAAGTTTAGATTCAAGTGTTGTTGATAACGTCAAATC
AGATCTGTTAGAAGGTTATGAACGCTTCAGTGAACAATTTAAGCATTCCGACGAGAACGC
AGATAAGATGGACCAAAGAAGTGGTGGTGATATGCTTGCACGTAACTTTTCAACCGCAAG
CAGAAGCTCTAATTGCTCTAGTTGCTCACCTCCTGGATCTAAGTGGAAATCAATCTTACA
TTCTGTGGCCAAGCAGGTTTCACAGGTTCCACTCTCATTGGGGATCAGGGTTGCATCTCT
ACGAGGAACACTGAGGTTATACGTAAAGCCACCACCTTCAGATCAAATATGGTTTGGATT
CACAGTGATGCCAGATATTGATATCCATTTGAACTCTTCTGTTGGGGATCGTAAGATCTC
AAGTGGACACCTTTTGTTGTTCATAACCAGTCGAATTAAGGCTGCTATTCGTGAATCTGT
TGTGCTTCCAAACTGTGAGAATGTATGCATACCTTGGATGATAGCAGAAAAGGATGATTG
GGTTCCCTTAAAAGATGCTCCCTATATATGGATTCATAACAAATCTGCAGTTAATGCCAA
GAAACAAGAATCAGATAGGAGAAGTACCAGCAGTAATGCTGAAAGTGAACAAGAGAAACT
GAACAGAGTTGGATGGGCTACTCAAAAGAGTAAGTCCCTGGATCCACACTCTTTGTACTC
AGCTCCTAAGGTCCAGCCTAGTTTCAGAAGCCTCACTACAAGTCCAGAAAGAACACACCT
TGAGTCTAAGAAACATCAGGGAGAGACACTACCACGCAAGTCATCAGACCCACAGGTATA
TTTATCAGTTCATATGGGCCAGTCTTCTGGAGCGGACTTGCATGCCCCTTTGTTGAGCCA
CAATGAACAGCTAGAGAGTCACCGCATGAGCACAGAGGAAAACATGCAAAGCTACTCACC
TTCATCTTCTCATTCACTGAGTATGCTGGAGGAACAAAATAGTTCTACAGAAGATGAGAT
GAAGCCAAGAAGAACAAGTGCAAGGGCTAAGATGCTTGGTTTGCGGAAAAAAATGGGGGA
AAAGCTTGAAGAGAAGAAGCGTCACATAGAAGAGAAGGGGAGACACTTGGTGACAAGGAT
GAGAAGCCACAAGGAATATTCGTAAATCTGCAGTTTGATTGAACAAGGGAAAACACGGGT
CAGTTTATTCAAAGGCTGTTCAGTTTAGACTATACGCAAGTTTCTCTCACTTATTCAAGT
AGCTAACGAAAATTGGATCCATACTCAGTCTTGTGCCCTGATACCCTTTGTCGATGATCT
CTTCTCACTTGTAAAAGTAAAAATTGTAGCCATTAGAAACCCATTTCAAGTACAGTCACA
TAGTAGATTTAAACTGCTTAGTCTTTGCAGAAATGATGAATACACTTGTACCAAATCAGA
TTTATTTAACTAAAAATGGTCTGTTATATGCCAATGACAACCCATGTTTGCACTTGCAGT
AGGCAGACAGAATGGTCAATACAAAAAGAGGTCTTCAAAGTAACACCTAAGATTTGTAAT
GCAGGATTATTAAGTCCTTTTTCTTTAGCAAATTGGTCTTGTATTCTTTACAAGTTATAT
TTTTTTTTC