Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g007970.2.1
CDS Infomation

UDP-N-acetylmuramate-alanine ligase (AHRD V3.3 *** Q3LHF7_PHYPA)
Sequence

ATGGAACTATCGGCAATAATGTCGCCGGCGAATTACCTAGAAAAAAATTCCAGTTATTCT
CAAGCAATTAATCTCACAAATCGCCGCCAAATAGTTCACAGTAGCAAATTAAAATACGTT
CGAACAACTTCCCCTTCTTTGAAATTACCCCCAGTGACTACGGATTGCGACAATGCAGAA
GTCATCGGTGCAAGAGAGCGCAGAGGGAAGGAATGGATTCACTTTGTCGGCGTCGGAGGT
TGCGGTTTGTCCGCTCTCGCCATGCTTGCTCTCAAACAAGGTTATGAGGTCAGTGGTTCT
GATATGATGTGGAGCGATGCCATGGACGCATTGCGAGAAGCAGGTGCCCGAGTGTATATA
GGCCATTCTGAGCTTAACTTGAGAAAGAATAATGGGTTGGTGCCTGATGCCCTTATTGTG
TCAAGTGCGATTCGTGGGGGCAATGTGGAGATTTTACATGCCGAGTCTGTTGGAATACCT
GTGTACAAGCGAGGAGCTTGGTTGGGTAGGATCACCAAAGGTTACAACCTCATTGCTGTC
AGCGGGAGCCATGGGAAGACTACCACCGCTAGTATGCTTGCTTATGTATTAGATGCAATG
GGGGATGATCTTACAGCTGTAATTGGGGCTCGGGTACCACAGCTAGCTGAAAGAAACATC
ATCTTTGGAACTGGTTGCAACTTTGTACTGGAGGCTGATGAATATGACTCTTGCTTCCTT
GGAGTAACACCTCAAATAGCTGTGGTAACAAATGTAGATTGGGAACATGTAGACATGTTT
CAAGACGAGGAAGCAGTTAAAACTATTTTCAGGAAGTTCATAGGGCAGATAAGGGCTGGA
GGACATTTAATTTTATGCGGTGATAGTCCGGTTGCATGTTCTTTGGTCAACAAAATGGGC
TCAGGCTCTGCTCTTCCAGTTCTTCGCAATGATGCATTCCAGATTTCTACTTACGGAATT
TCTAGTTGTAATGATTGGCATGCCTTATCAATATCCCCAAACTCTTGTGGGGGTAGTGAC
TATCAGCTGCTTCACAAGGGACATCATATTGCAGACATCAGCCTACAAATGCCTGGAGTC
CACAATGTTCTTAATTCATTAGCAGTCATTGCAACAATCAATGCTCTTTCTACGGATGAG
AAAAACTTTCTCAGTTCCATTGCTTCTTTGAAATTACGCTTGCAAAATTTTGAAGGTGTT
TCTAGACGTTTTGAGAGGATAGGTACAGTCCGTGGGTGCCATATATATGATGACTATGCT
CATCATCCCACCGAGATTCAAGCTACTCTTCAAGCAGCACGCCAGAGGTTTACATTTCAA
GAACTTGTAGTAATATTTCAGCCTCATACATACAGTCGTTTAGCAGCATTGAAAGACGAC
TTTGCTATTGCATTCACTAATGCGGACAGGGTTGTGATAACAGAGATTTATGAAGCCAGA
GAAACAAATCTGTGGAAGATCAATGGACACGATCTTGCAGCATCTATAGTTGGCCCACCA
TCTGAGTTTGTCCCTTCCCTGATACAGGTGTTGGAAATGCTGGTTGTTCATATATCCAAG
GATCCCGATCATGAAACTGTCATCATGACCCTAGGAGCAGGAGACATAACTTCAGTGGGT
CGTAAACTCCTAATTGAATTGCAGCACAGATTACTATAA

Peptide Sequence

PEP ID

Solyc03g007970.2.1
PEP Infomation

UDP-N-acetylmuramate-alanine ligase (AHRD V3.3 *** Q3LHF7_PHYPA)
Sequence

MELSAIMSPANYLEKNSSYSQAINLTNRRQIVHSSKLKYVRTTSPSLKLPPVTTDCDNAE
VIGARERRGKEWIHFVGVGGCGLSALAMLALKQGYEVSGSDMMWSDAMDALREAGARVYI
GHSELNLRKNNGLVPDALIVSSAIRGGNVEILHAESVGIPVYKRGAWLGRITKGYNLIAV
SGSHGKTTTASMLAYVLDAMGDDLTAVIGARVPQLAERNIIFGTGCNFVLEADEYDSCFL
GVTPQIAVVTNVDWEHVDMFQDEEAVKTIFRKFIGQIRAGGHLILCGDSPVACSLVNKMG
SGSALPVLRNDAFQISTYGISSCNDWHALSISPNSCGGSDYQLLHKGHHIADISLQMPGV
HNVLNSLAVIATINALSTDEKNFLSSIASLKLRLQNFEGVSRRFERIGTVRGCHIYDDYA
HHPTEIQATLQAARQRFTFQELVVIFQPHTYSRLAALKDDFAIAFTNADRVVITEIYEAR
ETNLWKINGHDLAASIVGPPSEFVPSLIQVLEMLVVHISKDPDHETVIMTLGAGDITSVG
RKLLIELQHRLL*

Transcript Sequence

Transcript ID

Solyc03g007970.2.1
Transcript Infomation

UDP-N-acetylmuramate-alanine ligase (AHRD V3.3 *** Q3LHF7_PHYPA)
Sequence

ACGAATTTTGAATGCTCCCTAACAGTAAACACGACATAAGAGTGACTTTGCTTTGAGCCC
CGACGTCCCCACCTCGAAAAATGGAACTATCGGCAATAATGTCGCCGGCGAATTACCTAG
AAAAAAATTCCAGTTATTCTCAAGCAATTAATCTCACAAATCGCCGCCAAATAGTTCACA
GTAGCAAATTAAAATACGTTCGAACAACTTCCCCTTCTTTGAAATTACCCCCAGTGACTA
CGGATTGCGACAATGCAGAAGTCATCGGTGCAAGAGAGCGCAGAGGGAAGGAATGGATTC
ACTTTGTCGGCGTCGGAGGTTGCGGTTTGTCCGCTCTCGCCATGCTTGCTCTCAAACAAG
GTTATGAGGTCAGTGGTTCTGATATGATGTGGAGCGATGCCATGGACGCATTGCGAGAAG
CAGGTGCCCGAGTGTATATAGGCCATTCTGAGCTTAACTTGAGAAAGAATAATGGGTTGG
TGCCTGATGCCCTTATTGTGTCAAGTGCGATTCGTGGGGGCAATGTGGAGATTTTACATG
CCGAGTCTGTTGGAATACCTGTGTACAAGCGAGGAGCTTGGTTGGGTAGGATCACCAAAG
GTTACAACCTCATTGCTGTCAGCGGGAGCCATGGGAAGACTACCACCGCTAGTATGCTTG
CTTATGTATTAGATGCAATGGGGGATGATCTTACAGCTGTAATTGGGGCTCGGGTACCAC
AGCTAGCTGAAAGAAACATCATCTTTGGAACTGGTTGCAACTTTGTACTGGAGGCTGATG
AATATGACTCTTGCTTCCTTGGAGTAACACCTCAAATAGCTGTGGTAACAAATGTAGATT
GGGAACATGTAGACATGTTTCAAGACGAGGAAGCAGTTAAAACTATTTTCAGGAAGTTCA
TAGGGCAGATAAGGGCTGGAGGACATTTAATTTTATGCGGTGATAGTCCGGTTGCATGTT
CTTTGGTCAACAAAATGGGCTCAGGCTCTGCTCTTCCAGTTCTTCGCAATGATGCATTCC
AGATTTCTACTTACGGAATTTCTAGTTGTAATGATTGGCATGCCTTATCAATATCCCCAA
ACTCTTGTGGGGGTAGTGACTATCAGCTGCTTCACAAGGGACATCATATTGCAGACATCA
GCCTACAAATGCCTGGAGTCCACAATGTTCTTAATTCATTAGCAGTCATTGCAACAATCA
ATGCTCTTTCTACGGATGAGAAAAACTTTCTCAGTTCCATTGCTTCTTTGAAATTACGCT
TGCAAAATTTTGAAGGTGTTTCTAGACGTTTTGAGAGGATAGGTACAGTCCGTGGGTGCC
ATATATATGATGACTATGCTCATCATCCCACCGAGATTCAAGCTACTCTTCAAGCAGCAC
GCCAGAGGTTTACATTTCAAGAACTTGTAGTAATATTTCAGCCTCATACATACAGTCGTT
TAGCAGCATTGAAAGACGACTTTGCTATTGCATTCACTAATGCGGACAGGGTTGTGATAA
CAGAGATTTATGAAGCCAGAGAAACAAATCTGTGGAAGATCAATGGACACGATCTTGCAG
CATCTATAGTTGGCCCACCATCTGAGTTTGTCCCTTCCCTGATACAGGTGTTGGAAATGC
TGGTTGTTCATATATCCAAGGATCCCGATCATGAAACTGTCATCATGACCCTAGGAGCAG
GAGACATAACTTCAGTGGGTCGTAAACTCCTAATTGAATTGCAGCACAGATTACTATAAT
ATACTGCATCACGAGATTGGCAGCAAACTCAAGACGTTTATAGCCTTTACATATAATTGG
CTAAATTTGAAGCCAAGGTTCCTAGAATTGTAGCACATTCATCTGCACTAAATATATGGC
GGCAAGCCTGACCTCATGATAGAAGATCTCGTCATGCAGATATGAAGATCATAATGTTCA
ACTGCTTGAGATGTTTGCATCCATTGATTGCTTTCTCTACTGCAGCAAATTCACCACTCT
GGGAACAGACCTGGTCAATGATACAGAAGGCATGGAGTAAGAAAGCACTGAGTTGCACCC
CAATAGTATTTCTTGAGCTCTATCAGTTCACCTCCCAGCATCACTGATCATCTTGATTCT
TGACTATGCATATTGGTAGCAGTACAGTTCCTCCCTTTATGGACTGCCTCTTTAGCTTAG
CAATCATGTGGATCTTGTGAAGGATATAAGAGAATTTTCGAATGTTTAGAGGATGGCTAT
TTACACTCAAAGTATATCCCCTCATTTCTAGTTTCTTGTTGGTGCATTTATGAATACAGA
AGATAGCTCGTCCTTTATAGAGAATCATAGTGTTGTAGGTCCTCTACTGTTGATTAATTG
CTAGGTTAAGGAGATCCAAATTTTTAATAGAAGTAATTGTCTTGGCAAAAAAATGATCAC
CATTCACATGATTGGCTTCTTTTTGTAGAGCAGGGGTACAATATTGTTGTGCACTGTAAT
CAATTCTATTCAATGCTTATGGAAGTTCAACCAGATTCCATT