Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g007960.3.1
CDS Infomation

beta-carotene hydroxylase-2
Sequence

ATGGCGGCCGGAATTTCAGCCTCCGCTAGTTCCCGAACCATTCGCCTCCGTCATAACCCG
TTTCTCAGTCCAAAATCCGCCTCAACCGCCCCGCCGGTTCTGTTCTTCTCTCCGTTAACT
CGCAATTTTGGCGCAATTTTGCTGTCTAGAAGAAAGCCGAGATTGGCGGTTTGTTTTGTG
CTGGAGAATGAGAAATTGAATAGTACTATCGAAAGTGAGAGTGAAGTAATAGAGGATCGG
ATACAAGTAGAGATTAATGAGGAGAAGAGTTTAGCTGCCAGTTGGCTGGCGGAGAAATTG
GCGAGGAAGAAATCGGAGAGGTTTACTTATCTTGTGGCAGCTGTGATGTCTAGTTTGGGG
ATTACTTCTATGGCGATTTTGGCGGTTTATTACAGATTTTCATGGCAAATGGAGGGTGGA
GAAGTGCCTTTTTCTGAAATGTTAGCTACATTCACTCTCTCGTTTGGCGCTGCCGTAGGA
ATGGAGTACTGGGCGAGATGGGCTCATAGAGCACTATGGCATGCTTCTTTATGGCACATG
CACGAGTCGCACCATAGACCAAGAGAAGGACCTTTTGAGATGAACGACGTTTTCGCCATA
ACAAATGCTGTTCCAGCTATAGCTCTTCTTTCCTACGGTTTCTTCCATAAAGGGATCGTC
CCTGGCCTCTGTTTCGGCGCTGGATTGGGGATCACAGTATTTGGGATGGCTTACATGTTC
GTTCACGATGGACTGGTTCATAAGAGATTTCCCGTAGGGCCTATTGCCAACGTGCCTTAC
TTTCGGAGGGTAGCTGCAGCACATCAGCTTCATCACTCGGACAAATTTGATGGTGTCCCA
TATGGCTTGTTCCTAGGACCTAAGGAATTGGAAGAAGTAGGAGGACTTGAAGAGTTAGAA
AAGGAAGTCAACCGAAGGATTAAAATTTCTAAGGGATTATTATGA

Peptide Sequence

PEP ID

Solyc03g007960.3.1
PEP Infomation

beta-carotene hydroxylase-2
Sequence

MAAGISASASSRTIRLRHNPFLSPKSASTAPPVLFFSPLTRNFGAILLSRRKPRLAVCFV
LENEKLNSTIESESEVIEDRIQVEINEEKSLAASWLAEKLARKKSERFTYLVAAVMSSLG
ITSMAILAVYYRFSWQMEGGEVPFSEMLATFTLSFGAAVGMEYWARWAHRALWHASLWHM
HESHHRPREGPFEMNDVFAITNAVPAIALLSYGFFHKGIVPGLCFGAGLGITVFGMAYMF
VHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFDGVPYGLFLGPKELEEVGGLEELE
KEVNRRIKISKGLL*

Transcript Sequence

Transcript ID

Solyc03g007960.3.1
Transcript Infomation

beta-carotene hydroxylase-2
Sequence

TTCCACAAACTAAAAATCCATCGTATTCGTATATTTAACCTTCCCTTTCATTTTCACTGA
ATTTGGATCCTCCACCGTCCATGGCGGCCGGAATTTCAGCCTCCGCTAGTTCCCGAACCA
TTCGCCTCCGTCATAACCCGTTTCTCAGTCCAAAATCCGCCTCAACCGCCCCGCCGGTTC
TGTTCTTCTCTCCGTTAACTCGCAATTTTGGCGCAATTTTGCTGTCTAGAAGAAAGCCGA
GATTGGCGGTTTGTTTTGTGCTGGAGAATGAGAAATTGAATAGTACTATCGAAAGTGAGA
GTGAAGTAATAGAGGATCGGATACAAGTAGAGATTAATGAGGAGAAGAGTTTAGCTGCCA
GTTGGCTGGCGGAGAAATTGGCGAGGAAGAAATCGGAGAGGTTTACTTATCTTGTGGCAG
CTGTGATGTCTAGTTTGGGGATTACTTCTATGGCGATTTTGGCGGTTTATTACAGATTTT
CATGGCAAATGGAGGGTGGAGAAGTGCCTTTTTCTGAAATGTTAGCTACATTCACTCTCT
CGTTTGGCGCTGCCGTAGGAATGGAGTACTGGGCGAGATGGGCTCATAGAGCACTATGGC
ATGCTTCTTTATGGCACATGCACGAGTCGCACCATAGACCAAGAGAAGGACCTTTTGAGA
TGAACGACGTTTTCGCCATAACAAATGCTGTTCCAGCTATAGCTCTTCTTTCCTACGGTT
TCTTCCATAAAGGGATCGTCCCTGGCCTCTGTTTCGGCGCTGGATTGGGGATCACAGTAT
TTGGGATGGCTTACATGTTCGTTCACGATGGACTGGTTCATAAGAGATTTCCCGTAGGGC
CTATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATCACTCGG
ACAAATTTGATGGTGTCCCATATGGCTTGTTCCTAGGACCTAAGGAATTGGAAGAAGTAG
GAGGACTTGAAGAGTTAGAAAAGGAAGTCAACCGAAGGATTAAAATTTCTAAGGGATTAT
TATGATCAAAAGATACGTCTGATAATAATAAAATGCGATTGTATTTAGGCTGTAGATTAT
TATTGGGAAAAAGATAGAAAGATATATATATGAATATAATATAAAATGCAACAAGCTTTC
TATGGAGAAGTCCTTTTCTTTTTTGGTTCCTGTACGTAAAAGGTGAACAATTTGATGTCC
TAGTACTTGTTGACAAACCAGAAGAACGATAATTCAAAACAAAGAAATGTACAATTACAC
TTATCGTATTGGATAATAAGAATATAGTGTTTTGGTCGTGAACTTAGAATTTGAGTCCGT
GAAATCACCA