Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g007940.3.1
CDS Infomation	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G23500.1)
Sequence	ATGGAGTTGTACCACCAATCAACATGCCATTTTCTAGGGAAACTGATTATCGCTTTGACA TGGGGAATACTTTGTCTTAGAGCAGCGGACTGTATTGAGTATGAAGCTTTAAGTTGTCGA AAACACACAGCATTATTGACAGATTTTGGAGGCAAAGGTGACGGAAAAACGTCGAACACA AAGGCATTTCGAAAAGCTATACATGAACTGAGCAAATTTGCAACAGATGGGGGAGCACAG CTCATTGTTCCTCCTGGGAAATGGTTAACAGGGCCATTCAATCTTACTAGTAAATTCACT CTTTATATACACAAGGATGCTGTCCTTCTAGTTTCTCAGGATGAGGCAGAGTGGGATTTA ATTCCACCATTGCCATCTTATGGAGTAGGAAGGGATACTCCAGGACCAAGGTTTATCAGT TTCATTTTTGGAACAAACTTGACTGATGTAGTCATTACAGGTGGAAATGGCACCATAGAT GGTCAAGGTCAACCGTGGTGGACTAAATTTCGACAAGGTCAATTGAAAAACACCCGACCT TACCTGATTGAGATCATGTTTTCTGATCATGTTCAGATTTCCAATCTTACATTGATCAAT TCTCCTTCATGGAATGTCCATCCTGTTTACAGCAGTGTTGTGGTAATCAAGGGATTAACA ATCCTTGCACCAGTTGATTCGCCAAACACAGATGGAATTAACCCTGATTCTTGTTCCAAC ACAAGAATTGAAGATTGCTTCATAGTCTCGGGAGATGATTGCATAGCAGTGAAAAGCGGT TGGGATGAATATGGAATTGCATTTGGAATGCCTACAAAGCACCTAATCATAAGAAACCTC ACCTGCATATCACCTGATAGTGCAGTCATTGCTCTCGGAAGCGAAATGTCCGGTGGCATT CAAGATGTGAGAGCTGAAAACATTGGAGCAATTAGTTCTGAATCAGGCCTGAGGATCAAA ACTGCTATAGGAAGAGGGGCGTACATTAAAGACGTGTTTGTGAGAGGAATGACATTGCAG ACAATGAAATATACCTTTTGGATAACAGGCGATTATGGGGCTCATCCTGACGAGCATTAT GATCCGAAAGCACTTCCTGTCATTCAAGGAATCAATGTAAAAGACGTTGTAGCTAAGAAT GTGACAATAGCAGGGAAATTAGTGGGGATAGATGGTGATACCTTCAATGGAATTTGCATA TCGAATGTGGCCATCGAGTTGTCAGAACAGGCTAAGCAACTACAATGGAACTGCAGTAAT ATCGAAGGTGTTTCTAGCCAAGTCACTCCTCAGCCCTGTGCTCTGTTGCCTGATAAGAAT ATTGAGTGTCCTTTTCCCACTGATACTTTACCTGTTGATAAGATTCAGTTCCAGACATGT GCTGCAGCTACTACTATGCATTAA

Peptide Sequence

PEP ID	Solyc03g007940.3.1
PEP Infomation	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G23500.1)
Sequence	MELYHQSTCHFLGKLIIALTWGILCLRAADCIEYEALSCRKHTALLTDFGGKGDGKTSNT KAFRKAIHELSKFATDGGAQLIVPPGKWLTGPFNLTSKFTLYIHKDAVLLVSQDEAEWDL IPPLPSYGVGRDTPGPRFISFIFGTNLTDVVITGGNGTIDGQGQPWWTKFRQGQLKNTRP YLIEIMFSDHVQISNLTLINSPSWNVHPVYSSVVVIKGLTILAPVDSPNTDGINPDSCSN TRIEDCFIVSGDDCIAVKSGWDEYGIAFGMPTKHLIIRNLTCISPDSAVIALGSEMSGGI QDVRAENIGAISSESGLRIKTAIGRGAYIKDVFVRGMTLQTMKYTFWITGDYGAHPDEHY DPKALPVIQGINVKDVVAKNVTIAGKLVGIDGDTFNGICISNVAIELSEQAKQLQWNCSN IEGVSSQVTPQPCALLPDKNIECPFPTDTLPVDKIQFQTCAAATTMH*

Transcript Sequence

Transcript ID	Solyc03g007940.3.1
Transcript Infomation	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G23500.1)
Sequence	TATAGTCAGACTAAAAGAATATTTGACTTAACTTAAAAGAAGGAAAAACTTATTAACTGT GTTAATACATACAAAATTATTTTGAATCTACTCGTAAATATAACAAACCGTTATGTCCTT TTCTCTACAATTGATACGTCAGGGTTCATTGTCCCGATTTATCTCTTATTTATTTCATTT GTAAGATTTATTGCCTTGGCTTAATATTGCATTACCGAATAAACACTTTCCAAATGCAAT ATAGCAAGTGGATTCTCTCATAACTAAATCATTAAATTTCTTATTACCAAATTTGCATCT AGTAAATTTCAATTTCTCTTGACTTTTAATAAATAGCAAAGTTTTCGCCATAATAATTGG AATAAGATTAATATACTTACCAATATGAAAATCTCTTAAAATGGTTAGTTATTAAATGTT TAGTTTGACGCACAATCTACACTACACTATATAACAGAATCATACAACCAATATTCATTC ATTCGAAAGCTTTTTGTTCATCAATGGAGTTGTACCACCAATCAACATGCCATTTTCTAG GGAAACTGATTATCGCTTTGACATGGGGAATACTTTGTCTTAGAGCAGCGGACTGTATTG AGTATGAAGCTTTAAGTTGTCGAAAACACACAGCATTATTGACAGATTTTGGAGGCAAAG GTGACGGAAAAACGTCGAACACAAAGGCATTTCGAAAAGCTATACATGAACTGAGCAAAT TTGCAACAGATGGGGGAGCACAGCTCATTGTTCCTCCTGGGAAATGGTTAACAGGGCCAT TCAATCTTACTAGTAAATTCACTCTTTATATACACAAGGATGCTGTCCTTCTAGTTTCTC AGGATGAGGCAGAGTGGGATTTAATTCCACCATTGCCATCTTATGGAGTAGGAAGGGATA CTCCAGGACCAAGGTTTATCAGTTTCATTTTTGGAACAAACTTGACTGATGTAGTCATTA CAGGTGGAAATGGCACCATAGATGGTCAAGGTCAACCGTGGTGGACTAAATTTCGACAAG GTCAATTGAAAAACACCCGACCTTACCTGATTGAGATCATGTTTTCTGATCATGTTCAGA TTTCCAATCTTACATTGATCAATTCTCCTTCATGGAATGTCCATCCTGTTTACAGCAGTG TTGTGGTAATCAAGGGATTAACAATCCTTGCACCAGTTGATTCGCCAAACACAGATGGAA TTAACCCTGATTCTTGTTCCAACACAAGAATTGAAGATTGCTTCATAGTCTCGGGAGATG ATTGCATAGCAGTGAAAAGCGGTTGGGATGAATATGGAATTGCATTTGGAATGCCTACAA AGCACCTAATCATAAGAAACCTCACCTGCATATCACCTGATAGTGCAGTCATTGCTCTCG GAAGCGAAATGTCCGGTGGCATTCAAGATGTGAGAGCTGAAAACATTGGAGCAATTAGTT CTGAATCAGGCCTGAGGATCAAAACTGCTATAGGAAGAGGGGCGTACATTAAAGACGTGT TTGTGAGAGGAATGACATTGCAGACAATGAAATATACCTTTTGGATAACAGGCGATTATG GGGCTCATCCTGACGAGCATTATGATCCGAAAGCACTTCCTGTCATTCAAGGAATCAATG TAAAAGACGTTGTAGCTAAGAATGTGACAATAGCAGGGAAATTAGTGGGGATAGATGGTG ATACCTTCAATGGAATTTGCATATCGAATGTGGCCATCGAGTTGTCAGAACAGGCTAAGC AACTACAATGGAACTGCAGTAATATCGAAGGTGTTTCTAGCCAAGTCACTCCTCAGCCCT GTGCTCTGTTGCCTGATAAGAATATTGAGTGTCCTTTTCCCACTGATACTTTACCTGTTG ATAAGATTCAGTTCCAGACATGTGCTGCAGCTACTACTATGCATTAAGTAAAAGATAGTG AAGTACCCAGCTAGTCCCCTGTTATGCTTTAATTTTTTGGAACCATTTTGATTATTAATT AAATAACATCCAGTCCATGGTTTCCAGTCTTCCAGTAAACTCAATTTATAGATGTTCCTG CAAAATGCTTCACCCTTAGACTTGGATAATATGTCTTTAAGGATAAAGTAGCGAATAATC TTTGAAAGGCCTCAAAAGAAGTCAGAGTGGGTGTTAAAACACACCAGATAAAACTAAGTA CGACTTTTACTGCCTTATTCCATTTTTTAATTATGTTGCAATATGCATAAGTAGCTGATG TTATACATAGCAATGGAAGTAAAATATAGGATGAGGTGATCAAGATATGGATGTTGCTGC AAAAAACAGCTCCAAATGTTTACATGAGAAATGATAAACATCATCAGCTCTCCAAATTTC CAAGATAGAATGGTGTTGGCATGCACAAGTTTTTGATTTCTCGAATTAATGGAGCACTTG GTGGGAGGGGGAGCAACTTGATCTCGAATATCTTTGGCCATAGTTTCCCTGTCACTGCAA TGAAGAACAGAATGGTATCATTCATAGAGCCATCCAAATTCTAAGTATCACTAAATTAAC ATTGTTAAAAACACAGCATCATGGCGGACGTTCCTTTATCGGAGATCTTATATTGGTACC AAAGGTACAAATTGTTTTGTGCCTTACAAATCGAGGCTACTACTTAAGTTGAATGAGAGC TTCCGATGCTTGGATTGCAGGTTAATGATAGAGGGAGAGGATTAGAAATAATTTTATTGA TACTCATTCGGTGAAAATTGAAATTTGGTTGTGTATTATAGAATAAATGCTAAGAGGTTA AGCTTGAGTGCCTATCTATCCAAAAAGCTGATGAAGATCACACATAATACTATAATGATC AATTCTTACCAAAAATACGGTCACCGTCTCTGTCCCATGCGATTCCATTCAGGACCTCAA TATACTGCAGTGAAGAGCAATAGAGGATTTAGCTTTTGCTCTATATTTGCATCAAAGAAC CGGGGGGGGGGGGGGGGAGCATGGAAATACGAAAGCACAAGGGATAAATTTCTTTCAATA ATGGAAGTTAAGGACTTTATTAGTTCCTGTCTATTCAGTTAAAGGAGAGGAAATGAAGGT AATCAAATCCTTAAAATCTTGGTGTAACTTATTTCATATAGGTAAGCATTTCTCACTTCC CATCAGTATAGCCTTCTGTCCATCTAGTGTAGAGGTTATTAACTTTTCTTTCATCTTCCC TCCGAACAAGGTACAGCCGTACAGCTAATTACCCATCCATATCATCAACCAGTGTTACAC TATCAAAGGCTACCAAACAGAACATAATAAAAATCAAAAAGGAAGTAATGCATCTTATGT AAAATAGTAAAAAAAGTTACCTTATAGCCTCTTGATTTTAAGTCTTCTCTGAAAGAAGTT AAAAGAAGCTATCTGTTAAAAAATCTTGACCAGAACTTGTGAACTGCAATACATTACGAC AAAGAACAAAAGCTAATACCTTAGAGATTGAAGAAGAATCCATCCGATCACAGTGCCATC TTTGGGTGAAATTCTAGCAATGCAATCAGTCTGCAGAGAAAGGCAATACCAACATTATTT TGGTCTCTAATTCAGTGTCAAACTTGGAGCTAACAATATGACACTCAGATGTGGAAAGAA TGTTATCTGCCACCATTTAGTGTCATATTCCACATCTGAGTGTCATACTCATAACCATAT CAAATGGGAGTATGCTTATAAAGAGGCTAGCCTAGACAGGTTGCTCTAATTTCTAGCTGA ATAAGAAAAGGAGAGGACTTAACTAAGTGGCACAAATAGAATACTGGTTCGTACAGTGAT GTCATGCACAATATATATCTTTATCAGAAACCTAATAAGTTGTACAAACTTATTTGACAT AATACAACTAGCTTCTTGAGCAAGGTTGTTTTCAGGACTTATTCCACTGAATACCATAAC CAAAACAACTATTGTTAAAGTTGCTCCATGGCTTCTAAATATGTGGATAGTGTAAATAAA TGGGGATAACAAATCTAAAGCCCAAATGGAACTCAGTAAAAGAGAGATTTGTACCGCATA GACATTTGACCATACTTCCTCTTTCACATACTCCAGCTCATTGAGGTAGTGCACTTCATG CCCTTGAGACTTGACAACTTGTTTTCTGATGACTGCATTAAGAAAATAAGTATCTCCATT TTAAGGAAGCAAAGAAAAAACTAAATATCATGTAGACCGTAGATGGAAAAACCTTTCATT GTCTTAGGGTCAATCTTATATAATGTTGATGTTCCATCACTTCCAAAAAGTACTTTCCCA TCAGTTGCCAATCCCCAACCATCTTGCATGTGATGAGTAAACTTTTTGAACTGCATATAA TTTTAATTTAAAAAAATAGTGAGCTAGGGGTAACTATAAAAAAGAATTTGGTTGCTCCAG TAAAGGGCTTCCGCCAGCTTCTTAAGAGAAGGATATAGTCAATCAAATTTTCATAGTTCC ATGTGAAGTTATAGGAAAGGAGAATTTCATATTCGAGATGACAATTTTAACTTGAACGTC AAACAGAGGACCTGACACCACATATCAAGGATGAAACAGCACAATATAAACAGTTAACTA ACATGTGAAGGCAGTGAAGTTAAATGAGGCAATAATCCTACTTACTTTTCTCATAAAATA CATGAGGAGCTTTCATATTACAACAAGCAACATCCAAATTAAAATCATGAAAAGAAGATG ATTCAAATGAAAGCACACAAAGTAATGGAGCCAAGCATACTTTGCTAAAGTTGTATCGAT CATATATGAAACCAGTATCCTGCAACCATGTTAGTTGGAACAAGCTGCAAAAATCGACAG TTGTTGCATAAGAACTAGTGATCAATTTAAATTCAAAATAGTAAACTATCACTAAAAGAT AAAGGAAAGGAAACAAAAAGACATAACGATCAAAAAGGAAAAGCTAAAGAAGAGAAAACT TGGTCTGGTCTAACGTACAACCAGAAAATATATCATGATTTATGAATATCTAAGTAATCC GAAAATCAGCTTTGTCTCTCTTCCGAATCAATTGTTATAGTTTCTATTTTCGGCTATCTC AAGCATGTTTTCATTAAAGGGAAGCTTCCATACATGTATAATTTTAAACCCATTTCTAAA GACGGAATAAAATTTCAACTCTTACTTCTTCTTCTATGTACCTAGTCAAAGTTGGAGAAC CAAATTGGACATAGGGAGTGCCGGAGTTGTTAATTAAGTAAAAGACTGCTACTAGAGCAC AGCCAAAACTTCAGATTATAAACAAAGTTTCACCGAATTCGAGTCGGTTAATTATTATTT GCAACAGCATTTACTTATCTGCAGTTTCATAATGACAATTGGCCCAAAACTAATACAAAA GCTAAATGCTATTGATATACAAGCAACACTAGGCTTACAGATATTCCTACAAAAATTTGA TGTGCTCATAACCATTCAAAAAATGCTGCAATATTCAGGACAGAATTCAATTTCAACCAT TACAAGGAGATGATAGAACAGCATATAAGTGCTACATATTATCCTATCTGATAAATGAAA GGTTGCTTACTTAGCAGTTATCACAACATATTTTCCACATTATTTCCAGAATCAATGCCT TACCTCTCACCAAGAAGAGCTAAACCCTCTCCAAAGTCAGAAGCCTGCATGTCATGAACA GTCTCAACCTGCGGAGCCAGCAATAGAAGGTTCCTTTTAGGTCCAAGATGGCACACTTTA TGTTTCAACAATAGATACCTGTTCTTTCTCGCACCATAAACTTCATAAAAACAGATAATG CAGCTTATAGATAGATATGTTAGCATTTTCAATTGGCAGAAGCTGCCCTGTGCGCCTGCT ATACTAAGCAGAAATGTAGTGACAAAATCTTCTTATTCTCCAGCCATGACGGAGAAGCCA ACAGAGAAAAAACAAACATGAATACTTATTTTAAATCCTCACAGAACTTCAAAATTGTAT TGTAGTTTTACTTTTTCGTAAGCAATTGTAGACATACCTTACCATTCAGCAATGCAACTT TCCGAACAGATGACTGCACTTTTCAGAAAGAGAGAACTATCCATGTCAAGCCTAAAAAAT AATCATGAAGTCAAATCAAATATGTATATATATATATACAAGACAACTCACACGTCCGTA AAGTCCAGTTGATTCAAAGAGTGTGTCATTTTCTGCGTAGAGAAGCCCCTGAAGAATAAA CACATCGCATCAGGACCGAACACAAATAATTAAGTTTCATGAACTCAAAAAATATCACCA AAATGCTTCAGATTCAACTTTTAAAAAAATGTTTCCAAGTAAAAGCTACCGTCACCAGAA AGTACATTTTACCAAAAATTTGGGGACGAACAACATTAGCTGAGCTATTGTGATCAGCGC CTAAATTTCTCATTTCCACCAACTATATAATCCAGAAAACTCGAAAATCATAATGCTAAT GTTGAAAAATAGAGAAAATCGCGAAAAGAGTAAGGAACCTCAGTGTAAGCTTCGGGGTCG TGAGGGAATTCATTGATGACTTCGACTTTGTAAGCTCCATAGGATGCTTCAGCTTCACTC AATACGGCAAAGCTCAGCAGAACAATCAAGCCTACAACTACAAACCTTCGAATTAGCAGA GACATTTTCTCGTCAAGGTGAGTAGTTGAAGCAGAAGAAGCCATTGATGATTAATTATTA AGAAGATTTGATGAAGAATAATTATAAATCAGTTGACCTGTTGACAACGTCGAGT