Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g007670.3.1
CDS Infomation

defense signal transduction Sgt1-2
Sequence

ATGGCGTCCGATCTGGAGACTAGGGCTAAAGAGGCATTCATTGACGACCACTTTGAACTC
GCCGTTGACCTGTACACTCAAGCCATAACGCTGAGCCCTAAGAACCCTGAACTTTTCGCC
GACCGTGCTCAGGCCAATATCAAACTCAACTACTTCACTGAAGCTGTTGTTGATGCGAAC
AAGGCCATTGAGTTGGATCCTACAATGTCAAAAGCATATTTACGCAAGGGGTTGGCCTGT
ATGAAGCTTGAAGAATACCAAACTGCAAAGGCAGCTTTGGAAATTGGTGCCAGTTTAGCA
CCAGGAGAGTTAAGATTCAGTAAGCTAATGAAAGAATGTGATGAACATATTGCAGAGGAA
GCTGGCGAATTGCCTAATCTGTCGGTGGATAAAACCTCAGCTAGTGTTGTTGCACATCCT
GCATCTGAGTTACCGGACAATGTTGCTATTGCGCCTGAAGGTGCTCAACCAACGGTCAAC
CAGTCCCATCAAGGATCTGCTGCCAAACCAAAATACAGGTTTTATGCCAAAGCTTTTGCT
GTACATGAATTTTATCAGAAACCAGAGGAGGTGGTGGTGACTATATTTGCCAAGGGCATA
CCAGCCAAGAATGTTGTTGTTGACTTTGGTGAACAAATACTTAGTGTTAGCATTGATGTG
CCAGGTGAAGAAACTTATTCTTTCCAGCCTAGGTTGTTTGGCAAGATAACACCTGCAAAA
TGCAGATACGAAGTGATGTCTACCAAAATTGAGATCCGCCTTGCGAAAGCTGAGCTGTTA
CACTGGACATCGCTTGAGTATACAACGGAACCTGTTGTAATTCAGAGGCCTATTGTGTCA
TCAGCTGCCCCGCGGCCCAGTTATCCTTCCTCAAAACTGAGAAATGTAGATTGGGATAAA
CTAGAAGCTGAAGTGAAAAAAGAGGAAAAAGATGAAAAATTGGATGGAGATGCAGCATTG
AACAAATTTTTCAGAGACATTTACCAAGATGCTGACGAGGACACTAGAAGAGCTATGATG
AAATCCTTTGTGGAATCTAATGGGACTGTTTTGTCGACAAACTGGAAAGAAGTTGGCACA
AAGAAGGTTGAAGGAAGCCCTCCGGATGGCATGGAGCTGAAGAAATGGGAGATCTAG

Peptide Sequence

PEP ID

Solyc03g007670.3.1
PEP Infomation

defense signal transduction Sgt1-2
Sequence

MASDLETRAKEAFIDDHFELAVDLYTQAITLSPKNPELFADRAQANIKLNYFTEAVVDAN
KAIELDPTMSKAYLRKGLACMKLEEYQTAKAALEIGASLAPGELRFSKLMKECDEHIAEE
AGELPNLSVDKTSASVVAHPASELPDNVAIAPEGAQPTVNQSHQGSAAKPKYRFYAKAFA
VHEFYQKPEEVVVTIFAKGIPAKNVVVDFGEQILSVSIDVPGEETYSFQPRLFGKITPAK
CRYEVMSTKIEIRLAKAELLHWTSLEYTTEPVVIQRPIVSSAAPRPSYPSSKLRNVDWDK
LEAEVKKEEKDEKLDGDAALNKFFRDIYQDADEDTRRAMMKSFVESNGTVLSTNWKEVGT
KKVEGSPPDGMELKKWEI*

Transcript Sequence

Transcript ID

Solyc03g007670.3.1
Transcript Infomation

defense signal transduction Sgt1-2
Sequence

GTAGTCTCAAAAAAATCCATTCCAATTGCCATTTCACTCTTGTTCTAGATACTTCTTTGG
AGTTCCTCTCCATCACCAATGGCGTCCGATCTGGAGACTAGGGCTAAAGAGGCATTCATT
GACGACCACTTTGAACTCGCCGTTGACCTGTACACTCAAGCCATAACGCTGAGCCCTAAG
AACCCTGAACTTTTCGCCGACCGTGCTCAGGCCAATATCAAACTCAACTACTTCACTGAA
GCTGTTGTTGATGCGAACAAGGCCATTGAGTTGGATCCTACAATGTCAAAAGCATATTTA
CGCAAGGGGTTGGCCTGTATGAAGCTTGAAGAATACCAAACTGCAAAGGCAGCTTTGGAA
ATTGGTGCCAGTTTAGCACCAGGAGAGTTAAGATTCAGTAAGCTAATGAAAGAATGTGAT
GAACATATTGCAGAGGAAGCTGGCGAATTGCCTAATCTGTCGGTGGATAAAACCTCAGCT
AGTGTTGTTGCACATCCTGCATCTGAGTTACCGGACAATGTTGCTATTGCGCCTGAAGGT
GCTCAACCAACGGTCAACCAGTCCCATCAAGGATCTGCTGCCAAACCAAAATACAGGTTT
TATGCCAAAGCTTTTGCTGTACATGAATTTTATCAGAAACCAGAGGAGGTGGTGGTGACT
ATATTTGCCAAGGGCATACCAGCCAAGAATGTTGTTGTTGACTTTGGTGAACAAATACTT
AGTGTTAGCATTGATGTGCCAGGTGAAGAAACTTATTCTTTCCAGCCTAGGTTGTTTGGC
AAGATAACACCTGCAAAATGCAGATACGAAGTGATGTCTACCAAAATTGAGATCCGCCTT
GCGAAAGCTGAGCTGTTACACTGGACATCGCTTGAGTATACAACGGAACCTGTTGTAATT
CAGAGGCCTATTGTGTCATCAGCTGCCCCGCGGCCCAGTTATCCTTCCTCAAAACTGAGA
AATGTAGATTGGGATAAACTAGAAGCTGAAGTGAAAAAAGAGGAAAAAGATGAAAAATTG
GATGGAGATGCAGCATTGAACAAATTTTTCAGAGACATTTACCAAGATGCTGACGAGGAC
ACTAGAAGAGCTATGATGAAATCCTTTGTGGAATCTAATGGGACTGTTTTGTCGACAAAC
TGGAAAGAAGTTGGCACAAAGAAGGTTGAAGGAAGCCCTCCGGATGGCATGGAGCTGAAG
AAATGGGAGATCTAGAATCGATCCTCTGTTGATGTTTTTTGACTTTGCATTTTAAGTTGT
TTCATTGCTATTTTTATTATAGAAGAATTTGTTCATATTTTCTTTTCTAAGGTTTTAAGT
TTTGTTCTTTGCTGTTGGATTGAGATAACAGTAATATATCTTCAAATTGTGGACAGCTTA
TCTTTTCAAGATCTTGTTAGAATTTCATTTTTGTTTTTCTAAGTTTCACCCAATGAGGAG
GTTCCTTTCCCTAATTACGTCTGTAGATGTGTAGGGGAATTCCAGGTT