Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g007600.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YJF0_CYNCS)
Sequence	ATGCTTTGTCTGAGGTATTCTCCGGTAATTTTTCCTACTAGAAGACAGGAAACAGTTCAG CTCCCCAAGAACTATAATCGTAACGTTGTGGTGTGCGAAGCTAAAGGTCCACGACCAAGG TATCCTCGAGTGTGGAAAACAAAAAAGAAAATAGGGACCATTTCCAAGTCACTGAAGCTT GTTGAGTGTATAAAGGGATTATCAAATGTCAAGGAAGAAGTCTACGGAGCGCTTGATTCA TTCATTGCATGGGAACTGGAGTTCCCTTTGATTACAGTGAAGAAAGCATTAAAAATTCTT GAGAATGAAAAAGAGTGGAAAAGGATAATTCAGGTGACAAAGTGGATGTTGAGTAAAGGT CAAGGGAGAACAATGGGAAGCTATTTTGCATTGTTAAACGCCTTGGCTGAGGATGGAAGA CTTGAGGAAGCTGAAGAGCTTTGGCTGAAACTATTCTCTCAGAATCTGGAAAGCATGCCT CGTATTTTCTTTCAGAAAATGATAGCCATATATTATCACAAGGAGATGAATGAGAAGATG TTTGAGATATTCGCAGACATGGAAGAGCTTGGTATTAGGCCAACTGTGCCAGTTGTCAAA ATGGTGGGAAATGTTTTTCAGAAACTGGGAATGTTGGACAAGTACCAGAAATTAAATAAG AAATATCCACCTCCAAAGTGGGAATATCGATACATAAAAGGGAAGAGGGTTAAAATAAGA ACAAAAGATCTTGATAAATCTCACGATCATGATGTTGAAAGTAACTCTGAAGAGGTAGAT GAGTCTGAGTTCGACGAGAACTCACAAGATCAAGAAAATGAAGATTATGTAGAGCAAATC GAAGACGCTGAAGAGTGTGAACCTGCTGAAGTATCAGTTGTATCTAGTGAAACAAGGGAA TCCTCTATGTCAACTTAA

Peptide Sequence

PEP ID	Solyc03g007600.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YJF0_CYNCS)
Sequence	MLCLRYSPVIFPTRRQETVQLPKNYNRNVVVCEAKGPRPRYPRVWKTKKKIGTISKSLKL VECIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKILENEKEWKRIIQVTKWMLSKG QGRTMGSYFALLNALAEDGRLEEAEELWLKLFSQNLESMPRIFFQKMIAIYYHKEMNEKM FEIFADMEELGIRPTVPVVKMVGNVFQKLGMLDKYQKLNKKYPPPKWEYRYIKGKRVKIR TKDLDKSHDHDVESNSEEVDESEFDENSQDQENEDYVEQIEDAEECEPAEVSVVSSETRE SSMST*

Transcript Sequence

Transcript ID	Solyc03g007600.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YJF0_CYNCS)
Sequence	GATTGACCAAATGACTCTAGTTCACTTAGCATTTCAGCAGTATCTAGGCCAATAATTACT TGCTGCGTATTTGAAATTTAAGCAAGCATTCAGAACTCTTTTCTTATCAACTTTTGGTCA TTTACAACCTAGCAAGGTAACAAAAAAGATCTTTTTTGATAAATTTAATAAAACTGACTT ATGTCAGCTTAATTATAGGTACTAACATTATGCATACACATAGCTTCTTTTTTTCCTTTC CTGAAATGCTAAAAGAGCTCCAAGATGGTTGGAACCATCAAACATGTTTAAAAGCAAACT TCCAGTTTGTCTAAAAATAACTGATATTTGAAGACAGGCAAGTAATTACATGATAGAACA GTCTTTCCATGGGAAGATGATTATAGAAACAACAATCAAGAAGTTTCTTTACTCAGACAA AGTTATCCTGCATGGTAGATAAACTAGAATAATACAACTTGCACCATTATACATTGATGA CATGAGCTTCTGCTAAAGGTTAGTATATATCATCCTGGAAGACCATTGACTAATCAAGAA ACATGTATGCCACATGGCACAATCATTTGGAAGTACTCACAGAAGGCAGTATGCTCGGTC TGATCCAATCACAAAAATATGTAAATGAACAATGCATCAATTGACCATTCTGCAAACATG AAACAAACAGAACTTTTTAACTTCAATGTCCATACCACAACGTTTTCTTCAGCTGTCAGA GTTTGCAGGATGTCTTCATCATTCTTCACTTGAAAGTAGATGTCTGACCAAAAGGCAAAG CACATAAACCTTCATAACTACCAAAATGTACTAGTGGTAGGAAAACATGCTAAATGACAA GAATTGAGCAGCTTACTTCCAAGTTCATCAGTTATATAAGGCAAGTCTGGCCAGAAAATG TTCTCCTGCACTTCATTGTTGACCACACCTGAAAACATGAGTGTTGCTTTGCTGTTTACC TACAGATCAAGTAGGAAAACAAATATTAGCTTTCTGAAGACAACTAGCTACAGTGATAAA TAGCTATCCGAGTTCATCAGTTATCTGGCCAGGAGAAGTTCTCATGCACGATTTACCAAA CCTGAAACCGTTAGTGTTGCTCTGGTGTATAACTAAAGATCATGTGGTAACGGAAATAGT ATTATATTTGCTCATGACAGGGTAGAGGGAAGCAGAAAGATATTGAGAGCCTGGGAGTAA TGTCCTGACACTGGATGTTTGTATGACTACTCACTCACCATCATGGATGACCCTGGATGC TATCCAGCTTTCCAAGGGCCACTGTGAAACAATAATTCAGTAAGGAAATAAAATCTTCAA GTCATCCAAAACTTTCTCTTCTTCTTTCTTTATAATATTTCCAACAGCTAATGACTAAAT CTCTATACATTTGCATTCAAAAACAGCATATGCTTCCAACATACGATCAAATAAAGCAAG CATGATACAATAGTATTTACAGGTACCTCAATGATTGTTCTAGCAGTTTCAGCTGGCGAC AGTTGAGCTTCCTCATTCTCCCCATTTTCCGAATCCGAAATGTCTTCAAACGGATGATAC CTGGATGGCTTCGCATTCTGTTTCACTGGTCCAGAACTCGCATTAGGCTGATCTCTCGCA CTTGCTTTAATTCCACATTTTCCCTTACCCGTTCTTATTCTACCACCACAATACTCCGTT GTCAACCTCCTTATCTTATTCCTACAAGCAAACAGTACATATACCGCAACGAGTTTACAA CATCATTTGAGCTTGCACTGTGTGCTTTTTACTGTTAGTATATAATAATAATCAGCTGGA TCAGTAATAGAGACAGTAAAAGGAAAACTAGTACCGAGGGATGAAGAAACTGGCGGCGTG AGAAAACCGGCGGGAGGTGCGGTTGAAGTTACCGGCGGGGAAACGAACGGCGACGGCGGC AGGTTCTACCATAAGCATTTTTCAAGTTTTCAGTAACTGAGGAATTGAATTAACGGGGAG AGATCAATGAAATAGAAGCAAAAAGTAGAGGGGATTTTCAAAGATCTTCTTCGTCCATCA ATCTTTTATCCATTTGAAAGCGCTCGCTTGTTTCTTCTTCTTTATTCATTAGCAATATGC GATAAAAGATTCCATGTCTGCTCCCATACCGTCCCTACAGCTGAGTCCACCTTCCAAAAT AACGGTGTGTAATTACTGTAATGCCCTTGGGGTTCATTTGATGGTTCACTTAGGATAAAC CCTCCAACTGAGAAAATATCTCAGTTCTCCATGTGTGCGAACGGACTTGGTTCTTGGGAA GCCATTAAAATACAGTTTCACTTTCAGCTCTCAATTAGTTGTGAGCATTTTCTGGAGTTT CAACTGATGCTTTTTCTTTCCCACCGAGAATGCTTTGTCTGAGGTATTCTCCGGTAATTT TTCCTACTAGAAGACAGGAAACAGTTCAGCTCCCCAAGAACTATAATCGTAACGTTGTGG TGTGCGAAGCTAAAGGTCCACGACCAAGGTATCCTCGAGTGTGGAAAACAAAAAAGAAAA TAGGGACCATTTCCAAGTCACTGAAGCTTGTTGAGTGTATAAAGGGATTATCAAATGTCA AGGAAGAAGTCTACGGAGCGCTTGATTCATTCATTGCATGGGAACTGGAGTTCCCTTTGA TTACAGTGAAGAAAGCATTAAAAATTCTTGAGAATGAAAAAGAGTGGAAAAGGATAATTC AGGTGACAAAGTGGATGTTGAGTAAAGGTCAAGGGAGAACAATGGGAAGCTATTTTGCAT TGTTAAACGCCTTGGCTGAGGATGGAAGACTTGAGGAAGCTGAAGAGCTTTGGCTGAAAC TATTCTCTCAGAATCTGGAAAGCATGCCTCGTATTTTCTTTCAGAAAATGATAGCCATAT ATTATCACAAGGAGATGAATGAGAAGATGTTTGAGATATTCGCAGACATGGAAGAGCTTG GTATTAGGCCAACTGTGCCAGTTGTCAAAATGGTGGGAAATGTTTTTCAGAAACTGGGAA TGTTGGACAAGTACCAGAAATTAAATAAGAAATATCCACCTCCAAAGTGGGAATATCGAT ACATAAAAGGGAAGAGGGTTAAAATAAGAACAAAAGATCTTGATAAATCTCACGATCATG ATGTTGAAAGTAACTCTGAAGAGGTAGATGAGTCTGAGTTCGACGAGAACTCACAAGATC AAGAAAATGAAGATTATGTAGAGCAAATCGAAGACGCTGAAGAGTGTGAACCTGCTGAAG TATCAGTTGTATCTAGTGAAACAAGGGAATCCTCTATGTCAACTTAATGATTTGAATTCC TATAAAGTTATCATTCGTTCGACATTTATTGTTGTGATTCTTCTCGTGTGATGAATTTAA CTGCTCATTGTCAAATGAACCAAGAGGAAAACCCATAACTGCAACGTATTCAAGTGAAAT AGGAGAGCAAGAACCAAGTGAAAGGATTTTTATCCTACAAATATATCAAGAGATGAGTGT CGTAAGCAAGGATGATAAAACCTGCCCCAAG