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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g007410.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G53210.1)
Sequence

ATGGATGGTGACCAAAATTTATCTGATTTATTCGACGATTCCGAATGCGATATCTTCGGT
ATTTTAGAGGCTTTAGAAGGCGGTGGAGGTGGAGGTGGTAATAGTGGTATTACTTCGAAA
TTTAATGATAATATCAACAACCAGACTGCAACAATCGCAACCACAATCACAACCACAACG
TCTGATGAAATTACGGGTTTGGTGTCAGAAGAAGGAAAGAAGAGGAAGTTAATATCTCAA
AAGTCCACGGGTTCATGCGCGACTTTACAAGAAGAGGAAACTATAGAAAATAAGATTTCT
CATATAACAGTTGAAAGGAATCGCCGCAAACAAATGAATGAACATCTCTCCGTGCTACGC
ACTTTGATGCCTTGTTTTTATGCTAAACGAGGTGATCAAGCATCAATAATTGGTGGGGTT
GTTGATTACATAAACGAGCTACAACAAGTTCTCCAATCCTTAGAAGCCAAAAAGCAACGC
AAAGTTTATAGTGAAGTTTTAAGTCCAAGAGTACTCCCACCACAACTAGTCCCAATTAGT
CCAAGACTATTAACACCTTCACCATTAAGTCCAAGAAAACCACCACTTAGCCCTAGAATG
AACTTACCAATTAGCCCAAGAACCCCACAACCCACAAGCCCATATAAACCTAATGCTAAT
GCTAACAAGCCACCTGAACCATCTCCTACTACTTCATCTAATTCTTCCATTGATAGTCAT
GTCAATAATGAGCTTGCTGCTAATTCAAAGTCAGCCATTGCTGACGTTGAGGTGAAATTC
TCCGGCGCCGGCGCCAATGTCATATTGAAGACCGTCTCTCCACGTATTCCTGGCCAGGCT
GTCAAGATTATTGCTGCTTTAGAACAACTCGCACTTGAAATACTCCATGTTAGCATTAGT
ACAATTGATGGTACCATGCTCAACTCCTTCACCATTAAGATTGGAATTGAATGCCAACTA
AGTGCTGAAGAACTGGCTCATCAGATTCAGCAGACATTCTGCTAA

Peptide Sequence

PEP ID

Solyc03g007410.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G53210.1)
Sequence

MDGDQNLSDLFDDSECDIFGILEALEGGGGGGGNSGITSKFNDNINNQTATIATTITTTT
SDEITGLVSEEGKKRKLISQKSTGSCATLQEEETIENKISHITVERNRRKQMNEHLSVLR
TLMPCFYAKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRVLPPQLVPIS
PRLLTPSPLSPRKPPLSPRMNLPISPRTPQPTSPYKPNANANKPPEPSPTTSSNSSIDSH
VNNELAANSKSAIADVEVKFSGAGANVILKTVSPRIPGQAVKIIAALEQLALEILHVSIS
TIDGTMLNSFTIKIGIECQLSAEELAHQIQQTFC*

Transcript Sequence

Transcript ID

Solyc03g007410.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G53210.1)
Sequence

CGAACAAAAGTAAAAGTGCAGAAAAGGTAAAAGTTGGTGTTTTTATAATTTCACCAAACT
TTTTTTTTCTTTTCATCATTAACCTATTATTATAAACCTTGTTCGTACTCTTTTGACTTC
ATTTTATACTTAAAAAACTACATTTTAGTACACATATATACTCCATTATTATTCTCTTTT
TAAATAAAGTATATTTACTTATATAACACCCTTACCTTTATTTATTCAGCAATAAATATC
CATCCATTGCTCTCTCTCTTATTCCCTTTTCTACATCTCCTCTTTTATTTTATTTTTCCT
CTCTAAAAATTTCCTTTCATACGCTCACTCACATATTATTACATTACCTCTACTTTTTTC
AACGTTGAAAATGGATGGTGACCAAAATTTATCTGATTTATTCGACGATTCCGAATGCGA
TATCTTCGGTATTTTAGAGGCTTTAGAAGGCGGTGGAGGTGGAGGTGGTAATAGTGGTAT
TACTTCGAAATTTAATGATAATATCAACAACCAGACTGCAACAATCGCAACCACAATCAC
AACCACAACGTCTGATGAAATTACGGGTTTGGTGTCAGAAGAAGGAAAGAAGAGGAAGTT
AATATCTCAAAAGTCCACGGGTTCATGCGCGACTTTACAAGAAGAGGAAACTATAGAAAA
TAAGATTTCTCATATAACAGTTGAAAGGAATCGCCGCAAACAAATGAATGAACATCTCTC
CGTGCTACGCACTTTGATGCCTTGTTTTTATGCTAAACGAGGTGATCAAGCATCAATAAT
TGGTGGGGTTGTTGATTACATAAACGAGCTACAACAAGTTCTCCAATCCTTAGAAGCCAA
AAAGCAACGCAAAGTTTATAGTGAAGTTTTAAGTCCAAGAGTACTCCCACCACAACTAGT
CCCAATTAGTCCAAGACTATTAACACCTTCACCATTAAGTCCAAGAAAACCACCACTTAG
CCCTAGAATGAACTTACCAATTAGCCCAAGAACCCCACAACCCACAAGCCCATATAAACC
TAATGCTAATGCTAACAAGCCACCTGAACCATCTCCTACTACTTCATCTAATTCTTCCAT
TGATAGTCATGTCAATAATGAGCTTGCTGCTAATTCAAAGTCAGCCATTGCTGACGTTGA
GGTGAAATTCTCCGGCGCCGGCGCCAATGTCATATTGAAGACCGTCTCTCCACGTATTCC
TGGCCAGGCTGTCAAGATTATTGCTGCTTTAGAACAACTCGCACTTGAAATACTCCATGT
TAGCATTAGTACAATTGATGGTACCATGCTCAACTCCTTCACCATTAAGATTGGAATTGA
ATGCCAACTAAGTGCTGAAGAACTGGCTCATCAGATTCAGCAGACATTCTGCTAAGAACA
GTACTCATTACTCTTTAGTATAATACTAGTCGTAATTTTAGTACTTTTTTTTTTTCAATT
TGGGAAAATTAGAAGTGTCTCAATCTAGTAGAGATCTGACTAGGGAGCTGTAACAATAAT
AAGAGAATGTAGTACGTAAAATAGTTGAGGTTCGTATAGATTGTAATGACTTTTATTTAA
ATTATTACTAGTAGTCGATCGATCGATTAATTAATTAATTAAATATGACCCTCCTCAATC
TATGTTATTGCTTTAATTT