Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g007260.3.1
CDS Infomation

Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 *** A0A0B4U3H6_SOLLC)
Sequence

ATGAATCACCGGCAAGAGAAATTTGTGAGGTTTCAGGATTGGAACTCAGAGAAAAGCTCA
GAGGGGAATTTTCCATATAAAGATGGAGCACACAGGGGCAGATTTGGAGTGTTCTCCAAT
GAATTACACAAATCCCTGGAAAGTGGTTCTGGAAGGATTAAAAGCATAATACATGCCTTA
AGTTCTTGTTTAAGTTGCCTTTTGGTCAAAAGTTTGGGATCAGAAAAAAAGATGCTTGAT
CCTCAAGGACCTTTTCTTCAGAAGTGGAACAAAATATTTGTATTATCCTGTGTAATTGCC
ATCTCCTTGGATCCTTTGTTCTTTTACATTCCAGTGATTGATAATAACAACAAATGCCTA
CATTTGGATAGAAAAATGGAGGTCACAGCTAGTGTTTTGCGTTCCATCACTGATATCTTT
TACCTTTTCCATATTGTGCTTCAATTTCGTACTGGTTTCATTGCCCCTTCATCACGTGTA
TTTGGAAGAGGCGTTTTGGTTGAAGATGCGTGGGAAATAGCAAAGAGATACTTGTCCTCT
TACTTCTTAATAGATATTCTTGCAGTTCTTCCTCTACCACAGGTTGCAATTTTAATTGTC
ATTCCTAAATTGCGGGGCGCTAAATCTTTGAATACAAAGACTTTGCTGAAATTTGTCGTC
TTCTTCCAATATATTCCGAGGCTCCTTCGAGTATACCCTTTATATAAGGAAGTCACTAGA
ACTTCTGGCATACTCACTGAAACAGCATGGGCTGGAGCTGCGTTTAATCTCCTTCTTTAT
ATGCTTGCCAGTCATGTACTTGGAGCCTTTTGGTACCTGTTTTCTATTGAACGTGAATCT
ACTTGTTGGCAACGAGCATGTGGAAATACATCTGCTTGTCATCATTCTTCATTGTACTGT
GATGATGATCATACAAATTTCATAAAATTGCTGAATGACTCATGTCCTATAGAGACACCA
AATACAACGCTCTTTGATTTTGGAATATTCCATGATGCCCTAAATTCTGGTGTTGTGGAG
TCAATGGATTTTCCACAGAAGTTCTTTTATTGTTTCTGGTGGGGTTTGCAGAACTTGAGT
TCCCTTGGTCAAAACCTCGAAACAAGTACCTATGTCTGGGAAATTTGCTTTGCAGTTTTC
ATTTCCATCGCTGGCTTGGTGCTATTTTCATTTCTCATTGGAAACATACGTATCTGCAGT
CTACAACACTCAGACTAG

Peptide Sequence

PEP ID

Solyc03g007260.3.1
PEP Infomation

Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 *** A0A0B4U3H6_SOLLC)
Sequence

MNHRQEKFVRFQDWNSEKSSEGNFPYKDGAHRGRFGVFSNELHKSLESGSGRIKSIIHAL
SSCLSCLLVKSLGSEKKMLDPQGPFLQKWNKIFVLSCVIAISLDPLFFYIPVIDNNNKCL
HLDRKMEVTASVLRSITDIFYLFHIVLQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLSS
YFLIDILAVLPLPQVAILIVIPKLRGAKSLNTKTLLKFVVFFQYIPRLLRVYPLYKEVTR
TSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERESTCWQRACGNTSACHHSSLYC
DDDHTNFIKLLNDSCPIETPNTTLFDFGIFHDALNSGVVESMDFPQKFFYCFWWGLQNLS
SLGQNLETSTYVWEICFAVFISIAGLVLFSFLIGNIRICSLQHSD*

Transcript Sequence

Transcript ID

Solyc03g007260.3.1
Transcript Infomation

Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 *** A0A0B4U3H6_SOLLC)
Sequence

AAGTTGATTGATAATATCTATTTAGAAAAAAAAAATTCAAAATCAAAATTAGCCCTACAG
AAGAAGTCTCCGGGAACCTTCCTTCACTCTATCATCGTCTTCGTCTTCTCTCTGAAAAAT
CTTAGTTGTTTCTTGCTGTACTATACAGTTTGTCTCCGCAAAATTTTGATTCGGTCCTGG
ATGTGTTATTGGAGGTGGTTTTTATGAAGAAACTTGTCGTCACTTGAAGGATTTTGGAAG
TTTTACTGCTTCTTGGAACAATAGACCCTTGTGGTTCGGCCCTTCTACGGAGCGTTAGTG
CATTAGACTGCTGTTTTACTGCCTGTTGGAACAGTTTGATGCACTGACTTAAGTTATGAA
TCACCGGCAAGAGAAATTTGTGAGGTTTCAGGATTGGAACTCAGAGAAAAGCTCAGAGGG
GAATTTTCCATATAAAGATGGAGCACACAGGGGCAGATTTGGAGTGTTCTCCAATGAATT
ACACAAATCCCTGGAAAGTGGTTCTGGAAGGATTAAAAGCATAATACATGCCTTAAGTTC
TTGTTTAAGTTGCCTTTTGGTCAAAAGTTTGGGATCAGAAAAAAAGATGCTTGATCCTCA
AGGACCTTTTCTTCAGAAGTGGAACAAAATATTTGTATTATCCTGTGTAATTGCCATCTC
CTTGGATCCTTTGTTCTTTTACATTCCAGTGATTGATAATAACAACAAATGCCTACATTT
GGATAGAAAAATGGAGGTCACAGCTAGTGTTTTGCGTTCCATCACTGATATCTTTTACCT
TTTCCATATTGTGCTTCAATTTCGTACTGGTTTCATTGCCCCTTCATCACGTGTATTTGG
AAGAGGCGTTTTGGTTGAAGATGCGTGGGAAATAGCAAAGAGATACTTGTCCTCTTACTT
CTTAATAGATATTCTTGCAGTTCTTCCTCTACCACAGGTTGCAATTTTAATTGTCATTCC
TAAATTGCGGGGCGCTAAATCTTTGAATACAAAGACTTTGCTGAAATTTGTCGTCTTCTT
CCAATATATTCCGAGGCTCCTTCGAGTATACCCTTTATATAAGGAAGTCACTAGAACTTC
TGGCATACTCACTGAAACAGCATGGGCTGGAGCTGCGTTTAATCTCCTTCTTTATATGCT
TGCCAGTCATGTACTTGGAGCCTTTTGGTACCTGTTTTCTATTGAACGTGAATCTACTTG
TTGGCAACGAGCATGTGGAAATACATCTGCTTGTCATCATTCTTCATTGTACTGTGATGA
TGATCATACAAATTTCATAAAATTGCTGAATGACTCATGTCCTATAGAGACACCAAATAC
AACGCTCTTTGATTTTGGAATATTCCATGATGCCCTAAATTCTGGTGTTGTGGAGTCAAT
GGATTTTCCACAGAAGTTCTTTTATTGTTTCTGGTGGGGTTTGCAGAACTTGAGTTCCCT
TGGTCAAAACCTCGAAACAAGTACCTATGTCTGGGAAATTTGCTTTGCAGTTTTCATTTC
CATCGCTGGCTTGGTGCTATTTTCATTTCTCATTGGAAACATACGTATCTGCAGTCTACA
ACACTCAGACTAG