Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g007230.3.1
CDS Infomation

Protein phosphatase 2c, putative (AHRD V3.3 *** B9RIK1_RICCO)
Sequence

ATGATTGATAACGTTAAAGGTATGCCGCCGGCAACCGAGAAAGGTTGCCGGTTAACGGCG
TTGATAGATTCCGGTGGACTAGCAGAAGTAGATCTGAGTGAGAAGGAGCAAAATTCTACT
CGACGTAGGCGATTGGATGAACGTTTGTTGAAATCGACGACTGAGCTACCGGAAAATTTC
GATGTCTTCGCAGATGATTACAGGCATTGTAAGAGGAAAAAAAGTACTGTAACTGATACT
GATGATCATCGAGTTCAACTAGCGTTATCTAGTGAAGTGAAAAAAGTAAGGGAGAGCTTG
GTGACGTGCTGTTCACATGGATCGATATCGTTGATCGGCCGGAGAAGGGAAATGGAAGAT
GCGGTGGCGATTTATCCGTGTTTTTTCAGTGAAGGCGGCGGCGGCGGCAGCAGGAGGTAT
GATTATTTTGGTGTTTACGACGGGCATGGAGGGTCACGTGTAGCGAACGTGTGCCGTGAC
TTTTTGCACCGTTTAGTGATACAGCAAGTTTCGGAAGGAGAAGATTACGATGGGAAGAGT
ATTAACTGGGAGAAAGTTATGACGGAGAGTTTCCGTAAAATGGACGAAAAGGTGAACAAG
GAAGGGGCGGAGATGGCGACGATAGGATCAACGGCGGTGGTAGCGGTGGTGGGAGTGGAG
GAATTTGTTGTTGCGAATTGTGGAGATTCAAGAGCTGTGCTTTCACGTGCTGGAGTTGCC
GTACCTTTGTCTATTGATCATAAGCCTGACAGACCTGATGAGCTGGATAGAATTGAAAAT
TCAGGTGGGAAAGTCATAAATTGGAATGGACAAAGAGTCTTAGGAGTTCTTGCTACTTCA
AGATCCATAGGTACGTCGAAGACTCAGCTTACTGCACTTGTAGGTGATATGTACCTCAAA
CCGTACGTGATACCAGATCCTGAAGTGATAGTTAGCAAAAGAAGCGATGAAGATGAGTTC
TTAATACTTGCAAGTGATGGTCTATGGGATGTCATTCCAAATGATGTTGCGTGTGACGTT
ACAAGAAGATGCTTGAATGGTCAAACGTTCAGAAGGTGCGATCAACAAACCAAATCCTAT
AAGAGAGATGAAGGCGTCAAAGAAAGTCTCGCAGCACGGGCAGCTTCCTTCCTTGCAGAG
TTAGCAATTGCTCGGGGTAGTAGGGATAACATCAGCGTAATTGTCGTCAATTTGAATAGA
TCTGTACGTTCATCCATTGATAGTTAA

Peptide Sequence

PEP ID

Solyc03g007230.3.1
PEP Infomation

Protein phosphatase 2c, putative (AHRD V3.3 *** B9RIK1_RICCO)
Sequence

MIDNVKGMPPATEKGCRLTALIDSGGLAEVDLSEKEQNSTRRRRLDERLLKSTTELPENF
DVFADDYRHCKRKKSTVTDTDDHRVQLALSSEVKKVRESLVTCCSHGSISLIGRRREMED
AVAIYPCFFSEGGGGGSRRYDYFGVYDGHGGSRVANVCRDFLHRLVIQQVSEGEDYDGKS
INWEKVMTESFRKMDEKVNKEGAEMATIGSTAVVAVVGVEEFVVANCGDSRAVLSRAGVA
VPLSIDHKPDRPDELDRIENSGGKVINWNGQRVLGVLATSRSIGTSKTQLTALVGDMYLK
PYVIPDPEVIVSKRSDEDEFLILASDGLWDVIPNDVACDVTRRCLNGQTFRRCDQQTKSY
KRDEGVKESLAARAASFLAELAIARGSRDNISVIVVNLNRSVRSSIDS*

Transcript Sequence

Transcript ID

Solyc03g007230.3.1
Transcript Infomation

Protein phosphatase 2c, putative (AHRD V3.3 *** B9RIK1_RICCO)
Sequence

CTCTCTCTTTTTGGACCGAATTACGCAAAATATCTTATACTACTTCCGTTTTATAATCTT
CGCAATGCAGTCACCGTCTTCACATTAAAATGATTGATAACGTTAAAGGTATGCCGCCGG
CAACCGAGAAAGGTTGCCGGTTAACGGCGTTGATAGATTCCGGTGGACTAGCAGAAGTAG
ATCTGAGTGAGAAGGAGCAAAATTCTACTCGACGTAGGCGATTGGATGAACGTTTGTTGA
AATCGACGACTGAGCTACCGGAAAATTTCGATGTCTTCGCAGATGATTACAGGCATTGTA
AGAGGAAAAAAAGTACTGTAACTGATACTGATGATCATCGAGTTCAACTAGCGTTATCTA
GTGAAGTGAAAAAAGTAAGGGAGAGCTTGGTGACGTGCTGTTCACATGGATCGATATCGT
TGATCGGCCGGAGAAGGGAAATGGAAGATGCGGTGGCGATTTATCCGTGTTTTTTCAGTG
AAGGCGGCGGCGGCGGCAGCAGGAGGTATGATTATTTTGGTGTTTACGACGGGCATGGAG
GGTCACGTGTAGCGAACGTGTGCCGTGACTTTTTGCACCGTTTAGTGATACAGCAAGTTT
CGGAAGGAGAAGATTACGATGGGAAGAGTATTAACTGGGAGAAAGTTATGACGGAGAGTT
TCCGTAAAATGGACGAAAAGGTGAACAAGGAAGGGGCGGAGATGGCGACGATAGGATCAA
CGGCGGTGGTAGCGGTGGTGGGAGTGGAGGAATTTGTTGTTGCGAATTGTGGAGATTCAA
GAGCTGTGCTTTCACGTGCTGGAGTTGCCGTACCTTTGTCTATTGATCATAAGCCTGACA
GACCTGATGAGCTGGATAGAATTGAAAATTCAGGTGGGAAAGTCATAAATTGGAATGGAC
AAAGAGTCTTAGGAGTTCTTGCTACTTCAAGATCCATAGGTACGTCGAAGACTCAGCTTA
CTGCACTTGTAGGTGATATGTACCTCAAACCGTACGTGATACCAGATCCTGAAGTGATAG
TTAGCAAAAGAAGCGATGAAGATGAGTTCTTAATACTTGCAAGTGATGGTCTATGGGATG
TCATTCCAAATGATGTTGCGTGTGACGTTACAAGAAGATGCTTGAATGGTCAAACGTTCA
GAAGGTGCGATCAACAAACCAAATCCTATAAGAGAGATGAAGGCGTCAAAGAAAGTCTCG
CAGCACGGGCAGCTTCCTTCCTTGCAGAGTTAGCAATTGCTCGGGGTAGTAGGGATAACA
TCAGCGTAATTGTCGTCAATTTGAATAGATCTGTACGTTCATCCATTGATAGTTAAGCTT
CCCATACAAATGAACAATTTTACGGATGGATCTTTCCTTTTGATTGTCTGCAGCAATACC
ATTACTGCCTTGCTTGCTTGTTTTCTTTTTCTTTTTTTTTCCATTTAGACTGTTATTGGC
CTTGGTTATTCACATTTGAATGATTTTTAACTGACAGGTTAGTTGCTGTAATGGAAGTCT
TTGAAGTTACCAACCTCAACCATACATTTTTTTACTAACAAGATTGACGAATTCATAATT
TTTTTGTTTCGTATTTGTACTGTTTCAACTTCCAGATTCCTTAATGAGACATGATAACAA
GCAACCTACATTTACAGTTTATCGTAATTCACTGAAGTTACCAAGCATTTATCAGAAAGA
GTAATATATAGGCCAATGCGTGTCATGACATAGATAAATAGCCACATCTACATTTCCTGC
TGCTATGCGTGTGACAAGTGGGAAGGATATGGTTGAGCTTACTCCAGCAGCAAGGAAAAG
AAATGGGTAATTAATTTCATAGAAAATGCACCTTCTTAAATCTTGACTCCACTCCCTGCG
GAACGTGGGCTATCGCGGAGACCGCTCACCTCCCTCCTTAAAAAGCATGGCAATGCAAAA
GCAGCTTCATGCATCTGTTAAAAGAACAAGATACTCTGTTAGAAGAAAAATGACAGCTTT
TCTTGGTTGAATTAAAGTGCAGCTATTGATGTATGTCGATGCATCCAATGGAACAGAGAC
GAGGAAAGCTTATAACTCAAAATTGTTACCCTATACCAGCTAGTAAGGTTAAAAAAATAT
AGTTCAAATGGTAGAAAAGGCACTCTTATCAAATGGCAGATGATAAGCTTGTATAGTTTG
TCTCTGTACATTCGAAACACTCATAATCTCAAATTATATCCAAAACTTAAACATTTTATC
CCAGGTTATGGTACAAAACTCGAAGAAAAGTAAATATTGATGCATACCACACGCGCAGTC
AATACAGCATAAACAAAATTAGAGAATGTTTATTGGTGATGTTATGAGTAGCAATATGAA
ATTGCTTACTAGTAGAACAAGTTACCTCAGAATTGTAAAACTTGAGTTCCCGCTGATGCT
GGAGAGCGCCCTCTAACTTCTCAATAGGATTAACAGGGTGCTTAAAATCAACAAATGGTC
CCTCAGTTGAGCACAGAAGAAACCCAATAACGCCACTGCATAATACGTAAAGCAATAATC
CTCAATAACAATTAAGTGGAAGCATTTTTGACAATTCTTCTTTAACCTTCAACCGCACAA
CTAAGGAAAAACAAATAAGTAAAATGGCTACATTAACTTGCAAGGCTGTTGCTGTTAATT
CCTAAATTATACCTAGGATATGTAGGAACACTGGCCCATGCATAATGAACAGAACTAAAT
GTTTCACGGCAAATTGAGATCATATCTTGAATAAGATGAGTATGAAGCCACATGCTCTCT
GCCATGTTGCAAAGTACACCGCCAGGCCTTAATGCCCTGGCTATCTTTGCAAAGAATGGT
CCTTCAACAAGCTCTATTGCAGGACCTGTAATGAAAGACATTTGAGAAGAATTAAACTAA
AGTTCATTGGATTGAAAAATTACTAGATGCTGCAAAACCCATCTATTAGGAGTGTGAGTT
ACAAAACCAGAAAACCAAAACTATTCCTACTCCAAACAAGAGAAGATACTAAACAGTCAA
TATCTACACTGGCCAAGAACATCCAATTCAAACAAAAGAAGTGATGTGCTCTCCAACAAA
AGACATGGATATCTACCCAGAAATGCATTCAGTTTACAATCCTTAAAAATCAGTTAACTA
TAGGCTCTATCTTCAACAAACAAAATCTGCCGTATTTGGACAGGGGATTGCCTCACTGTG
GATGGCAGGATGCTGTATGGAAAGTCGATAAATGACTATTAAGTTGTTAAAACTTTTAAA
AAGCAAGGATTCATAAAATTAAAAGATGCATCCGACTTACCTACAGGATCTGATGAATCA
ACTATGATAGCATCATACTTCCCTTCAGGTGTGTTCTTCAGAAATTCAACAGCTGTCAAA
AATCATTCAGAAAGTCATATATAGCTTTATCTCAAAAAAAAAGTCATACAGCTCAACTAG
TGAAACGGGGAAATTAAATTTCAGCCTCCCAAGCATTCTCCCAATAACTAAAAATCAAAA
GTAGAAAAAATCTTTTTGAATTGATGCGAAGACTCATACTAATAAGATCAAGCGACACAT
GCAAGTGTTCATACCATCACCAACATGAAGATTGACACGAGGATCCTCAAAGCCAATAGC
CAAATCTGGAAAATACTTTTTACTGACCTGCAACACAGGAAAATACAACATATTTAATAT
GAAAATCAACAAAAGCATCAATCCATGTATCTTCGATCTATTACTCACATCTATAACCAT
TTTATCAATCTCACAAATATCAATCAGCTCCACAGAGCTATGTCGAGAAATTTCCCTTAG
AACTCCACCATCACCACCCCCAACAACCAGAACCTGCATGTGTAGGTCAAAATAGATCAG
ACAGCGAACAAATGAATGGTAAAACTGAGAAGAAAAAAAACCCAAGCCAAAACAGATTAA
TATAAAAGATGAGGCATTCAAACAATATATATATATATATATGAGGCTTATCATATCTTC
ATAATGAGCTTATCATAGACTCAAATCTTTCTAATTTTGTCTTGGATGCCCAGGCAAAGA
ATAAAATCAGGGTTATGAAAAGAAATGAAGAAAAAAATAAAGAACCTAGTATTCATTAAC
TCTTTTCTCTCCCTTGTAATAAATGAGAAAACCCACACTCCCACAGCAGCTGTAAAAGAC
AGCAGCATTTCAGACTAGGCCTTTTGAGCAATTAATTAAATTGATCAACTATCACCTATA
TCAGATTCCATCTAAAACAAGCAGACAGAGATAACAAGCAGGTAGTGCCACCATTCTAGT
GATTATTCACAACGCATATTTGAAGTTCAAAATCTGCAGATAAAACTGAAAACTGGTAAA
CCAATGCTGACAAGTGATAAAAACCCATAAATCAATGAAGATTTGGTACTTTAACAGATG
CTTAACAAGTAAAGAAACTGGTAGATGAAAATTTTAGTTCCACCAACATCCACACACATC
AAATTCTCATCCACTACAAACGGGTTCTGCAGAAATAATAGCCGAATACTCAGATGATTG
AGCTTCCTCTGTGTATATCCTTCAAAACTAGGACATTTCTTACTTTCAAGTTCAAAGTAA
TTACATGTAATCATGTTAAAAGAGATACTGCTTAATGCAGTCCACCAAGTTTTCATTCCT
AATGCATATCCACTAAATGATTATTCAGATTCCTTCATGCCATAGACCTATCAGGGGCTT
TAATCTTAACATTGGGTGATTCACATGTTTCAGTACACCCACAATATTGAATTCATGAAA
AGAAAATTGACAAAAATAAATGTGTGCATATCCTGCTTCATCTCCCTCTGTTAATAGCAA
CATAGTCAAATACCCCCCATTCAACCAGTTCAGATATTGATGTCCTTGTATGTGGAAATG
ATAGTAACATACAGCAAACAGAGTAAAAGCGACAATTTTTGA