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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g006880.3.1
CDS Infomation

gibberellin 20-oxidase-1
Sequence

ATGGCTATTGATTGTATGATCACAAATGGAAAATCTCCCATGCTAGATGAAAAAAAACAA
TTTATTTTTGATGCATCTCATATGAAACGTGAGTCTAATATTCCCACACAATTCATATGG
CCTGACCACGAGAAGCCTTGTGCCTTAGTACAACAACTTCATGTACCCCTTATTGATTTA
AGGGGTTTTCTTTCTGGTGACCCCGACGCGGCCCAACAAGCATCTGAGCTTGTTGGGGAA
GCGTGTCGGGGTCATGGTTTTTTTCTTGTGGTGAATCACGGAGTTGATGCTAATCTCATT
TCTAATGCTCATCGTTATATGGATACGTTCTTTGAGTTGCCGCTTTTAGAAAAGCAAAAA
GCTCAGAGAAAAATTGGTGAGCATTGTGGTTATGCTAGTAGTTTTACTGGAAGGTTTTCA
TCAAAGCTACCTTGGAAAGAGACACTCTCTTTTCGTTACTCCGCTAAGAAAGAATCATCT
CACATAGTTGAAGAGTATTTTCAAAGTACATTGGGCGAAAGTTTTAACCATCTCGGGAAT
GTTTATCAAGAATATTGCAATTCTATGAACACACTTTCTCTTGGGATCATGGAACTCTTA
GGGATGAGCCTAGGTGTAGAGAAGAGTCACTTCAAAGAGTTTTTCGAAGAAAATGATTCG
ATAATGAGACTCAACTACTATCCACCATGCCAGAAACCGGAGCTCGCCTTAGGAACGGGG
CCTCATTGTGATCCAACATCATTAACAATTCTCCATCAAGATTGTGTTGGTGGACTTCAA
GTTTTTGTGGACGATGAATGGCGTTCCATCAGTCCAAATTTCAATGCATTTGTGGTTAAT
ATAGGCGACACATTTATGGCGCTATCAAATGGAAGATACAAAAGTTGCCTACACAGAGCG
GTAGTAAACAACAAGACTCCTAGGAAATCACTTGCTTTCTTTCTTTGTCCAAACAAAGAT
AAGGTGGTGAGCCCACCAAATGAATTGGTGGACTCCAACAACCCTCGAATATATCCCGAT
TTCACATGGCCTACTCTTCTTGAATTTACTCAAAAACATTATAGAGCTGATATGAACACT
CTTCAAACATTCTCAAATTGGCTTCATGATCAACACAACACTACTACACAAGCTTAA

Peptide Sequence

PEP ID

Solyc03g006880.3.1
PEP Infomation

gibberellin 20-oxidase-1
Sequence

MAIDCMITNGKSPMLDEKKQFIFDASHMKRESNIPTQFIWPDHEKPCALVQQLHVPLIDL
RGFLSGDPDAAQQASELVGEACRGHGFFLVVNHGVDANLISNAHRYMDTFFELPLLEKQK
AQRKIGEHCGYASSFTGRFSSKLPWKETLSFRYSAKKESSHIVEEYFQSTLGESFNHLGN
VYQEYCNSMNTLSLGIMELLGMSLGVEKSHFKEFFEENDSIMRLNYYPPCQKPELALGTG
PHCDPTSLTILHQDCVGGLQVFVDDEWRSISPNFNAFVVNIGDTFMALSNGRYKSCLHRA
VVNNKTPRKSLAFFLCPNKDKVVSPPNELVDSNNPRIYPDFTWPTLLEFTQKHYRADMNT
LQTFSNWLHDQHNTTTQA*

Transcript Sequence

Transcript ID

Solyc03g006880.3.1
Transcript Infomation

gibberellin 20-oxidase-1
Sequence

CTATTTTCCCAATGAACGGCCTTGGCTTTTCCTTTATCTCAACTCTCTCTCTCTTTATAT
TTCCTTTCAATTTTTGGCTCTTCACAAATTATAATTAACTAGTCTTTGCATGCAATTATA
ATGGCTATTGATTGTATGATCACAAATGGAAAATCTCCCATGCTAGATGAAAAAAAACAA
TTTATTTTTGATGCATCTCATATGAAACGTGAGTCTAATATTCCCACACAATTCATATGG
CCTGACCACGAGAAGCCTTGTGCCTTAGTACAACAACTTCATGTACCCCTTATTGATTTA
AGGGGTTTTCTTTCTGGTGACCCCGACGCGGCCCAACAAGCATCTGAGCTTGTTGGGGAA
GCGTGTCGGGGTCATGGTTTTTTTCTTGTGGTGAATCACGGAGTTGATGCTAATCTCATT
TCTAATGCTCATCGTTATATGGATACGTTCTTTGAGTTGCCGCTTTTAGAAAAGCAAAAA
GCTCAGAGAAAAATTGGTGAGCATTGTGGTTATGCTAGTAGTTTTACTGGAAGGTTTTCA
TCAAAGCTACCTTGGAAAGAGACACTCTCTTTTCGTTACTCCGCTAAGAAAGAATCATCT
CACATAGTTGAAGAGTATTTTCAAAGTACATTGGGCGAAAGTTTTAACCATCTCGGGAAT
GTTTATCAAGAATATTGCAATTCTATGAACACACTTTCTCTTGGGATCATGGAACTCTTA
GGGATGAGCCTAGGTGTAGAGAAGAGTCACTTCAAAGAGTTTTTCGAAGAAAATGATTCG
ATAATGAGACTCAACTACTATCCACCATGCCAGAAACCGGAGCTCGCCTTAGGAACGGGG
CCTCATTGTGATCCAACATCATTAACAATTCTCCATCAAGATTGTGTTGGTGGACTTCAA
GTTTTTGTGGACGATGAATGGCGTTCCATCAGTCCAAATTTCAATGCATTTGTGGTTAAT
ATAGGCGACACATTTATGGCGCTATCAAATGGAAGATACAAAAGTTGCCTACACAGAGCG
GTAGTAAACAACAAGACTCCTAGGAAATCACTTGCTTTCTTTCTTTGTCCAAACAAAGAT
AAGGTGGTGAGCCCACCAAATGAATTGGTGGACTCCAACAACCCTCGAATATATCCCGAT
TTCACATGGCCTACTCTTCTTGAATTTACTCAAAAACATTATAGAGCTGATATGAACACT
CTTCAAACATTCTCAAATTGGCTTCATGATCAACACAACACTACTACACAAGCTTAAGAG
CTACAAGATTGAAGACCTTGAAAATTTTCTTTTAAATATATGTACGTGTACACGTTCTCT
TAGCTTCTACTAAGAATATGACAATGTATGGGAATTAGGGGGAAGAGGCACAATGGAAAT
GTTTCTTTCAAAAATTTCACAAGAAGAATGAAAATTTCGAGTTAAAAAAAAAGAAGTAAA
TATAGAGGAGATAGGGAAGGACAAGAAAGGAATAAGCGTTGTATAACTTAGTTTTGTTTA
TTTAACGTATTGAAAAAAAAATGTAGAGAAGATTATGAATAGCTAGCTTTACTGGTATCC
AATGTATGCATCCCTCATTAAGAGAGAACTTTTGAAACCTCTTCATTTGATCTTTTGTTT
CTCTTCAAGCGTCTC