Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g006430.3.1
CDS Infomation

DUF616 family protein (AHRD V3.3 *** G7IPT3_MEDTR)
Sequence

ATGACTACAGGGTCATTGGGTCTTCGTTCTTCAGGAAGTTATGGTTCTTTGCAACAACAA
CTATTTCAGAATAGTTCATCACCAATCCAAACAACATCCCCTATTCCAAGAAAACCCCCA
AAATTGTTTAAGGAGAAAGAGGGATTGTTTCTCTGGATCTGCAAATTCGCCCCTCGAAAG
AATGTTGGGATGTTGCTACTCTGTGTTGTTTCTGCTGCAGCTTTTCTGTGGGTCTTGTAT
GTTGGCAAAGGTGAAGTTGCCGCAGAACAAAGTAATAGGATGTTTGCTCCAGAAACTGTA
CATAAATATATTTTTAGCGGTATTGAGTCTATACAAAAAAATAATGTTGGCCGAAGTGTG
TCAATTGTGCAACCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCTTCTTCCTCCTGTATAT
TTCAAAGGATACACTCTTCCCCCTGGAAATCCATGTGAAGGCTTCACGTTGCCACCCCCG
CCAGCAGATAAGAAGAGGACTGGACCACGGCCATGTCCGGTGTGCTACCTTCCTGTTGAA
CAAGCTATTGCATTAATGTCTGATGCACCATCCTTTTCTCCTGGTGTTAGCAATTTGACT
TACATCCATGAAGAAAATCAGAGTAAAGCCGATTTTGGAGGTTCAAATTTCGGCGGATAT
CCTTCGCTGTTTCAGAGGATTGATTCTTATGACATAAGAGAGTCCATGAGGGTGCATTGT
GGTTTTGTCAGAGGAGTCAGGCCTGGACATCAGACAGGTTTTGACATTGATGATTCTGAC
CTTCTTGAGATGGAATCTTGTCAAGGTGTCGTGGTGGCATCTGCAATATTTGGGGCTTTT
GATTTGATACGGCAACCAAAGAATACCAGTGAATATGCAAAGAAAAATGCCTGCTTCTAT
ATGTTCGTGGATGAGCAAACAGAAGCATTTTTGAGAAATTCAAGTGAGCTGAACAGTAGC
ATGAGAATTGGTTTATGGAGAATTGTTGTTGTTCATAACCTACCTTATGGTGATCCAAGG
CGAAATGGAAAGGTCCCAAAGCTTCTACTCCACAGGCTTTTTCCTAATGCTCGTTATTCT
CTATGGATTGATGGAAAACTTGAGCTTGTCGTGGATCCATATCAAATACTTGAAAGGTTC
TTGTGGAGAAAAAATGCAAGCTTTGCTATATCAAGGCACTACAAGCGTTTTGATGTTTTT
GTAGAAGCAGAAGCTAATAAGGCAGCTGCGAAGTTTGATAATGCTTCCATCGACTTCCAG
GTTGAATTCTATAAAAAGGAAGGACTTGCTCCGTATTCCCGGGCTAAACTTCCTATTACA
AGTGATGTCCCTGAGGGATGTGTAATAATAAGGGAGCACATTCCGATCTCCAATCTCTTT
ACTTGTCTTTGGTTTAATGAAGTGGACCGTTTTACTCCAAGGGACCAAATAAGCTTTGCC
ATTGTAAGAGATAAGATCATGTCAAAGACAAATTGGACTGTGAATATGTTCTTAGACTGC
GAACGGCGTAACTTTGTGATTCAGGGGTATCACAGAGACATTCTTGGGCGCCTGACTCCA
CCTCGTGCAAGTATACTCGTTCATCCTCCACCTCCTGTAATTCTTGAAACCCGGCATACC
TCACCATTTGTTCCAACGTCAACTGTCATAACCACTCCAATCAAAAAGATTCCCACGAAG
CGTGGGAGAGAGAGGAAATCCAAGCGTCATAGAAAAGTCATTGCTGGAAATAGAGATCCT
AATTTCAATTGA

Peptide Sequence

PEP ID

Solyc03g006430.3.1
PEP Infomation

DUF616 family protein (AHRD V3.3 *** G7IPT3_MEDTR)
Sequence

MTTGSLGLRSSGSYGSLQQQLFQNSSSPIQTTSPIPRKPPKLFKEKEGLFLWICKFAPRK
NVGMLLLCVVSAAAFLWVLYVGKGEVAAEQSNRMFAPETVHKYIFSGIESIQKNNVGRSV
SIVQPPPPPPPPPPLLPPVYFKGYTLPPGNPCEGFTLPPPPADKKRTGPRPCPVCYLPVE
QAIALMSDAPSFSPGVSNLTYIHEENQSKADFGGSNFGGYPSLFQRIDSYDIRESMRVHC
GFVRGVRPGHQTGFDIDDSDLLEMESCQGVVVASAIFGAFDLIRQPKNTSEYAKKNACFY
MFVDEQTEAFLRNSSELNSSMRIGLWRIVVVHNLPYGDPRRNGKVPKLLLHRLFPNARYS
LWIDGKLELVVDPYQILERFLWRKNASFAISRHYKRFDVFVEAEANKAAAKFDNASIDFQ
VEFYKKEGLAPYSRAKLPITSDVPEGCVIIREHIPISNLFTCLWFNEVDRFTPRDQISFA
IVRDKIMSKTNWTVNMFLDCERRNFVIQGYHRDILGRLTPPRASILVHPPPPVILETRHT
SPFVPTSTVITTPIKKIPTKRGRERKSKRHRKVIAGNRDPNFN*

Transcript Sequence

Transcript ID

Solyc03g006430.3.1
Transcript Infomation

DUF616 family protein (AHRD V3.3 *** G7IPT3_MEDTR)
Sequence

TTTATTTTAGTGGCCAAAAACAAGCTGTCCATCGCGTTATCACGCGCACATGGCGCATGA
GAGCACTCATCAATTATATATATAGAACAGTATAAATAACACTAAAATTTGCAGAAAATA
TCTTCAATAAAAATGGAAAATATGAAAAAAAATATATTAATTACTGGTAAACTGTGATCT
GAGATTTGATAGGTTTCACTTAACCCTAGAAATCATTTCTCAATTTCAGAGTCATTTGTA
ATTTATTGCTATTGCAATTTTGTATATTAAAGTTTGTTTTAAAAAAACCAATTTTGAGTG
GTTGGGTTGAATTGTATGTATGTATATATAGTTTGTAATGTTTCTGGTTTTGGGTTGTTT
TGTATTTGAGATGAAGAAGAAGCAAATTCTTCATCTTAACTTGCTTTGTATTTTTTAGTA
TTTAAGAGTTTGTATTGATAGTTTTGGTGAAGTGGGTTGTTGTTAGTAGATCGATAAGTA
AGCAGGAGGGGATTGATTGTAACTCTATAGATCGTTTTGGTTAATTGGGTATCCTTTTTC
TTGGTGAATTTTTTGAAAAAATAGATTGGCATTGCCAGATTTGTTTTGAGCTGATTTTGT
TGAAGTGTTTGGAGTTTTGGAGGTGAATTTAGTGCATTTTTTAAAATTAGATTGACATTA
CGAGATTCGTGTAGTGAGGAGAAGTTTCTGGTGTTTTGAGCTGATATTGTTGGTTGTTGG
AAATTTGGAGGTGAATTTGGTGCATTTGTATTTGATTGGCGTTGCTAGATTCGGTGTGGT
AAGTGTTCAAAATTTGGAGCATTTTCATAGTAGATTGGCATTACTAGTTTCATGCAGTGA
AAGGTTTCTGGTGTTTTTTGAGCTGATTTTGTTTAAAGTGTTTTCAAATTTGGAGGAAAA
TTTGGTGCCTTTCTTTTTTATTAGATTGGCATTGCCAGATTCGTTTAGTGCGGAGAAGTT
TCTGGTGTATTTGAGCTGATTTTGTTCGAGTGTTTGAAATTTGGAGGTAAATTTAGTGAA
AAGATTCAACTTTGGAGCATCTTTTATTAGATTGGCATTACAAGATTCGTGTAGTGAGAA
GTTTTCTGGAGTTTTTGAGCTGATTTTGTTGAATTGTTCCAAATTAGAATGTGAAATTTA
GTGAAAAGATTCAAACTTTAAGAAATAAAGTGAAACTTTTTTGATGTGGATGAGTGGAGG
GGGGCAATGAGAGGTGAAGTTTTAGGATTGAGGGGACAACAATGACTACAGGGTCATTGG
GTCTTCGTTCTTCAGGAAGTTATGGTTCTTTGCAACAACAACTATTTCAGAATAGTTCAT
CACCAATCCAAACAACATCCCCTATTCCAAGAAAACCCCCAAAATTGTTTAAGGAGAAAG
AGGGATTGTTTCTCTGGATCTGCAAATTCGCCCCTCGAAAGAATGTTGGGATGTTGCTAC
TCTGTGTTGTTTCTGCTGCAGCTTTTCTGTGGGTCTTGTATGTTGGCAAAGGTGAAGTTG
CCGCAGAACAAAGTAATAGGATGTTTGCTCCAGAAACTGTACATAAATATATTTTTAGCG
GTATTGAGTCTATACAAAAAAATAATGTTGGCCGAAGTGTGTCAATTGTGCAACCTCCTC
CTCCTCCTCCTCCTCCTCCCCCTCTTCTTCCTCCTGTATATTTCAAAGGATACACTCTTC
CCCCTGGAAATCCATGTGAAGGCTTCACGTTGCCACCCCCGCCAGCAGATAAGAAGAGGA
CTGGACCACGGCCATGTCCGGTGTGCTACCTTCCTGTTGAACAAGCTATTGCATTAATGT
CTGATGCACCATCCTTTTCTCCTGGTGTTAGCAATTTGACTTACATCCATGAAGAAAATC
AGAGTAAAGCCGATTTTGGAGGTTCAAATTTCGGCGGATATCCTTCGCTGTTTCAGAGGA
TTGATTCTTATGACATAAGAGAGTCCATGAGGGTGCATTGTGGTTTTGTCAGAGGAGTCA
GGCCTGGACATCAGACAGGTTTTGACATTGATGATTCTGACCTTCTTGAGATGGAATCTT
GTCAAGGTGTCGTGGTGGCATCTGCAATATTTGGGGCTTTTGATTTGATACGGCAACCAA
AGAATACCAGTGAATATGCAAAGAAAAATGCCTGCTTCTATATGTTCGTGGATGAGCAAA
CAGAAGCATTTTTGAGAAATTCAAGTGAGCTGAACAGTAGCATGAGAATTGGTTTATGGA
GAATTGTTGTTGTTCATAACCTACCTTATGGTGATCCAAGGCGAAATGGAAAGGTCCCAA
AGCTTCTACTCCACAGGCTTTTTCCTAATGCTCGTTATTCTCTATGGATTGATGGAAAAC
TTGAGCTTGTCGTGGATCCATATCAAATACTTGAAAGGTTCTTGTGGAGAAAAAATGCAA
GCTTTGCTATATCAAGGCACTACAAGCGTTTTGATGTTTTTGTAGAAGCAGAAGCTAATA
AGGCAGCTGCGAAGTTTGATAATGCTTCCATCGACTTCCAGGTTGAATTCTATAAAAAGG
AAGGACTTGCTCCGTATTCCCGGGCTAAACTTCCTATTACAAGTGATGTCCCTGAGGGAT
GTGTAATAATAAGGGAGCACATTCCGATCTCCAATCTCTTTACTTGTCTTTGGTTTAATG
AAGTGGACCGTTTTACTCCAAGGGACCAAATAAGCTTTGCCATTGTAAGAGATAAGATCA
TGTCAAAGACAAATTGGACTGTGAATATGTTCTTAGACTGCGAACGGCGTAACTTTGTGA
TTCAGGGGTATCACAGAGACATTCTTGGGCGCCTGACTCCACCTCGTGCAAGTATACTCG
TTCATCCTCCACCTCCTGTAATTCTTGAAACCCGGCATACCTCACCATTTGTTCCAACGT
CAACTGTCATAACCACTCCAATCAAAAAGATTCCCACGAAGCGTGGGAGAGAGAGGAAAT
CCAAGCGTCATAGAAAAGTCATTGCTGGAAATAGAGATCCTAATTTCAATTGAAAATTTT
GATGTGAGCACAAATTATTTTATTTTCCTTCCCTGTTTTCAGTATATCAAATCGCGGGGT
TAGGAACTGTGAAAGATGAATGTTCTAGCTGTTGTTTCCACAAAAAAAAAAAGGTCAGTA
TTCAAGTTCTTCATAAGATTCTTTACAAAGTGTCAATTTTTTGTTTAATTTTTTGTTGTA
TATATTGGAGTCTTAGTATGTATTGTCATAGCAATTTTACACTGCAAATTGCCTTCTCTA
ATCACTAGCTTCATGTACTGTTTCTTCTCATAGAAATGTTGATTATGAAGCAAAGATGAA
ATTCAATTTCCTTTATACT