Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g006010.3.1
CDS Infomation

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2)
Sequence

ATGGCTCAACATGAAACTTGTTCTTCTTGGTTACTTGTTCTTTCTCTTCTTTCAATCATA
GTGTCATTTTATAGAGTTTCTTGTGTAAATCTTGATCATGAAAATGGTTACATATCGGCT
GTTGGCGATTCGGGGATGAGAAGAGATGGTCTAAGAGTTGCTATAGAAGCATGGAATCAA
TGCAATGAAGTTGGAGAAGAAGTGCCTAAGATGGGAAGTCCAAGAGTTGCTGATTGCTTT
GATGTCTATAAAGCTTCTCCTAAATCACAAGGGGAAAATAATTGTTCTCTTTGCAATGCA
ATACCATACATGTTGGTACATAGAGTAACAGAGGAAGAAAACAGGTTAGGTATAGGAAAA
TCATTTCTTGGATTGGAGAAAAAGGCAATTCTTGATGTTAATCATTATGCAGTACAAAAA
GAAGTTTACTTGGGATCAAAATGTCAAGTTGAAGACAAGCCAAATCCTTGGCAATTTTGG
ATGATCATGCTCAAGAATGGAAACATGGATACTTACGCTGCTAAGTGTCCGAAAAACGGG
CTGTTATCTGGCCCGTACGGGCCTGATAACAACTTTCCGTGTTTCGGAAAAGGGTGTATG
AACCAACCATTGATTTTTCACAACTACACAACTTTACAAGGTGCTAATAGGACTACACTT
AAAGGGAGTTTTTATGGTACATGGGATTTGCATAGTAAATCAAGAACAGAGAATAATTCT
TCTTTTTATTCTGTTAAATGGAAGAAAGAATTGGGAAAAGGTAGTTGGATTTTTCATCAT
GTGTTGAAGACATCAAATAAGTATCCTTGGCTTATGCTTTACTTAAGATCAGATGCTACA
TTTGGTTTTTCTGGTGGATATCATTATCCAACTAGAGGCATGTTAAAAATTATACCAGAA
TCACCAAATTTTAAGGTGAAATTCACCTTAAATGTGATAAAAGGAGGAGGTCCAAACAGC
CAATTTTACTTGATGGACATAGGGAGTTGTTGGAAGAACAATGGCAAGTTATGTGATGGG
AATGTAACAACAGACGTTACGCGATACAGTGAGATGATATTGAATCCAGAAACACCATCA
TGGTGCAAACCAGATAGTCCAAAACTGTGTCCACCGTACCACATTTTCTCAAATGGATCA
AGAATTCATCGAAACGATACGATTCGTTTCCCTTATGAGGCTTATCATATGTATTGTGCA
CCTGGAAATGGTGAATACATTGAGGAACCTAATGTTCATTGTGATCCTTATAGTAATCCT
CAACCTCAGGAGATTTTGCAGATTTTGCCACATCCTGTTTGGGGGGATTATGGTTATCCT
ACTAGGAAAGGTGATGGTTGGATTGGAGATCCAAAAACATGGGAACTTGATGTTGGGAAG
TTGTCACAATCACTTTATTTTTATCAGGATCCAGGAACTACACCAGCAATAAGGAAATGG
ACTTCAATCAACTTGGGAACTGAAATTTATAAAGATCCAAATCAAGTGGCAGAGTGGACA
GTTACTGATTTTGACATTCTTGTACCTAAATAA

Peptide Sequence

PEP ID

Solyc03g006010.3.1
PEP Infomation

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2)
Sequence

MAQHETCSSWLLVLSLLSIIVSFYRVSCVNLDHENGYISAVGDSGMRRDGLRVAIEAWNQ
CNEVGEEVPKMGSPRVADCFDVYKASPKSQGENNCSLCNAIPYMLVHRVTEEENRLGIGK
SFLGLEKKAILDVNHYAVQKEVYLGSKCQVEDKPNPWQFWMIMLKNGNMDTYAAKCPKNG
LLSGPYGPDNNFPCFGKGCMNQPLIFHNYTTLQGANRTTLKGSFYGTWDLHSKSRTENNS
SFYSVKWKKELGKGSWIFHHVLKTSNKYPWLMLYLRSDATFGFSGGYHYPTRGMLKIIPE
SPNFKVKFTLNVIKGGGPNSQFYLMDIGSCWKNNGKLCDGNVTTDVTRYSEMILNPETPS
WCKPDSPKLCPPYHIFSNGSRIHRNDTIRFPYEAYHMYCAPGNGEYIEEPNVHCDPYSNP
QPQEILQILPHPVWGDYGYPTRKGDGWIGDPKTWELDVGKLSQSLYFYQDPGTTPAIRKW
TSINLGTEIYKDPNQVAEWTVTDFDILVPK*

Transcript Sequence

Transcript ID

Solyc03g006010.3.1
Transcript Infomation

calcium/calcium/calmodulin-dependent Serine/Threonine-kinase (AHRD V3.3 *** AT2G47010.2)
Sequence

ACTCGGATACTATTAGGATCTAAAAATTATTATGTCCCATTTCATTGTCCTTCCCAATGG
TTTTAGTATATATAAGAAGTGTTAACATAGTCTAGAAAACTTACCAATGGCTCAACATGA
AACTTGTTCTTCTTGGTTACTTGTTCTTTCTCTTCTTTCAATCATAGTGTCATTTTATAG
AGTTTCTTGTGTAAATCTTGATCATGAAAATGGTTACATATCGGCTGTTGGCGATTCGGG
GATGAGAAGAGATGGTCTAAGAGTTGCTATAGAAGCATGGAATCAATGCAATGAAGTTGG
AGAAGAAGTGCCTAAGATGGGAAGTCCAAGAGTTGCTGATTGCTTTGATGTCTATAAAGC
TTCTCCTAAATCACAAGGGGAAAATAATTGTTCTCTTTGCAATGCAATACCATACATGTT
GGTACATAGAGTAACAGAGGAAGAAAACAGGTTAGGTATAGGAAAATCATTTCTTGGATT
GGAGAAAAAGGCAATTCTTGATGTTAATCATTATGCAGTACAAAAAGAAGTTTACTTGGG
ATCAAAATGTCAAGTTGAAGACAAGCCAAATCCTTGGCAATTTTGGATGATCATGCTCAA
GAATGGAAACATGGATACTTACGCTGCTAAGTGTCCGAAAAACGGGCTGTTATCTGGCCC
GTACGGGCCTGATAACAACTTTCCGTGTTTCGGAAAAGGGTGTATGAACCAACCATTGAT
TTTTCACAACTACACAACTTTACAAGGTGCTAATAGGACTACACTTAAAGGGAGTTTTTA
TGGTACATGGGATTTGCATAGTAAATCAAGAACAGAGAATAATTCTTCTTTTTATTCTGT
TAAATGGAAGAAAGAATTGGGAAAAGGTAGTTGGATTTTTCATCATGTGTTGAAGACATC
AAATAAGTATCCTTGGCTTATGCTTTACTTAAGATCAGATGCTACATTTGGTTTTTCTGG
TGGATATCATTATCCAACTAGAGGCATGTTAAAAATTATACCAGAATCACCAAATTTTAA
GGTGAAATTCACCTTAAATGTGATAAAAGGAGGAGGTCCAAACAGCCAATTTTACTTGAT
GGACATAGGGAGTTGTTGGAAGAACAATGGCAAGTTATGTGATGGGAATGTAACAACAGA
CGTTACGCGATACAGTGAGATGATATTGAATCCAGAAACACCATCATGGTGCAAACCAGA
TAGTCCAAAACTGTGTCCACCGTACCACATTTTCTCAAATGGATCAAGAATTCATCGAAA
CGATACGATTCGTTTCCCTTATGAGGCTTATCATATGTATTGTGCACCTGGAAATGGTGA
ATACATTGAGGAACCTAATGTTCATTGTGATCCTTATAGTAATCCTCAACCTCAGGAGAT
TTTGCAGATTTTGCCACATCCTGTTTGGGGGGATTATGGTTATCCTACTAGGAAAGGTGA
TGGTTGGATTGGAGATCCAAAAACATGGGAACTTGATGTTGGGAAGTTGTCACAATCACT
TTATTTTTATCAGGATCCAGGAACTACACCAGCAATAAGGAAATGGACTTCAATCAACTT
GGGAACTGAAATTTATAAAGATCCAAATCAAGTGGCAGAGTGGACAGTTACTGATTTTGA
CATTCTTGTACCTAAATAAAAGTTTAAGATGTAGAAAAGAGAAAAAAAAATTAAAAAGAA
TTTTATTTTTATTTATTATTTACAAATTTGGGAAAGATTTAAATTTGGTCTGAAAAGAAG
ACCTTAAGTTTTCTCCAAGGTTTGTATTTCTTTTAATTACAAAAAAAAAGTATTTTTTTG
ATTTGTTCCAAGTTGTTTGATTGAAATTGAGAAATAGAAGAAGCTTATGAAATTTGTATC
TTCAAACTATGTTGTTCGAACTTTCTCAAAATTGTCGTATTTGTGTTATTCCT