Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g006000.3.1
CDS Infomation

SolycHsfA4a
Sequence

ATGGATGAAGCTCCTTGCAGCGTCAATGCACTGCCTCCGTTTATTGCAAAGATATATGAA
ATGGTGGATGATCCCTCCACTGATCCAATAGTCTCATGGAGTTTAAACAATAAAAGTTTT
ATTGTTCGTAATCCTCCTGATTTTGCAAGAGATTTGTTGCCCAGATACTTTAAGCACAAT
AATTTTTCCAGCTTTATCCGACAGCTGAATACTTACGGATTCAAGAAAATAGATCCCGAA
CAATGGGAATTCGCAAATGAGGATTTTCTTAGAGGTCAGCCACACCTTTTGAAGAATATC
TATAGACGGAAACCTGTTCACAGTCATTCTGTACAGAATATTCATAGCCTCTCATCATCT
GCATTGACCGAATCGGAAAGACAAGGGTATAAGGAAGATATTGAAAAGTTGAAGCATGAG
AACGAATCACTTCATTTAGTTCTACACAGGCATAAACAGGATCATCAAGGACTTGAAATG
CAAATGCAGGTCCTTAACCAACGTGTCCAACAAGTGAAAGACCGGCAAAAGAACGTGCTG
TCTACTTTAGCTCGAACCATAAATAAACCAGGATTAGCTTTGAGTCTCATGCCACAACTG
GAAATGAATGAAAGGAAGAGAAGGTTGCCAGGAAACAGTTTTCTTTACAATGAAATAGGC
CTGGAAGATAATCAAGCGAGTTCTTCTGAAAATACGACTAGGGAAAATATGGACCATACT
TCTCTTTCGACTCTCAACAAGGAAGTGCTAGATCAGTTGGAATCTTCTTTGACCTTTTGG
GAGTATACACTGCGTGACATTGATCAAACTAGAATGAGACGGAGCTCTTCAATAGACTTG
GATGAATCTATCAGTTGTGCCGATAGCCCTGCTATATCTTACCCACAACTAACTGTTGAT
GTTGGATCTAAGGTTTCTGATATTGACATGAACTCTGAGCCTAATGGAAACACTACTCCT
GATGTTACTCCGCCAGAAAACCGAGTAGAGACTGCTAGTCACAATGTGCCAACAGGAGTA
AATGATGTATTCTGGGAACAATTCCTTACTGAGAACCCTGGTTCTACTGATGTAAAGCCG
GAGAGAGAAGATATGGAGAGCAAAATAAGTGAATCCAAAACAGTTGAGGATGGGAAATTT
TGGTGGAACAGGAAGACTGTAATTAGCCTTACAGAACAGTTGGGACATCTTACTCCAGCA
GAGTGA

Peptide Sequence

PEP ID

Solyc03g006000.3.1
PEP Infomation

SolycHsfA4a
Sequence

MDEAPCSVNALPPFIAKIYEMVDDPSTDPIVSWSLNNKSFIVRNPPDFARDLLPRYFKHN
NFSSFIRQLNTYGFKKIDPEQWEFANEDFLRGQPHLLKNIYRRKPVHSHSVQNIHSLSSS
ALTESERQGYKEDIEKLKHENESLHLVLHRHKQDHQGLEMQMQVLNQRVQQVKDRQKNVL
STLARTINKPGLALSLMPQLEMNERKRRLPGNSFLYNEIGLEDNQASSSENTTRENMDHT
SLSTLNKEVLDQLESSLTFWEYTLRDIDQTRMRRSSSIDLDESISCADSPAISYPQLTVD
VGSKVSDIDMNSEPNGNTTPDVTPPENRVETASHNVPTGVNDVFWEQFLTENPGSTDVKP
EREDMESKISESKTVEDGKFWWNRKTVISLTEQLGHLTPAE*

Transcript Sequence

Transcript ID

Solyc03g006000.3.1
Transcript Infomation

SolycHsfA4a
Sequence

TTTTTAAAAATATCTTTATTAACTCACTTATATTAACTGGCTAAGTGGTTTAACTACTCA
TTTCACACTCTTAAAATAACCACCCTATATAAACTATATATAATAAAATATGAATAAACA
TCCAAAAACCATTGAGAAGAAGTCTTTGAGAAAAGGGTCAAAGTAAACTTCATCTTTCTA
TGTGCTTCTTCTTGTTAAGGACTATTCTTGATTTTTTCTTACAGGTAATTTTCTCACAAT
GGATTTCTTGTATTTTCAGATTTGACATGATTTGAGCTTTTGTTTGAAGTTTTTTGGAGT
AAAATTGATTGTTTTTTAGCGAATTTGAGGAAAGTTCGGAAATTTCTGAGTTTTAGAGGG
TGAAACGGCTATCTTTTGAATTCAAGCTAGCATTTGTTTGAGCACTTGTGGGAACTCATG
ATGGGCCGCAATCTCTTTTAACAATTCTTTAGCAAATTTGTGTGTTTTGAAAGCTATCCA
GAGCTGGGACTTGAATGGAAATGTGTATTTGCTAAGAATTTGTATGATCAGGTGGGAGCT
GCTTCAATTGAATTTATCGAAGGAAATCAAGGTGATAACACTTTTGGTTGGTTGTATCTG
TATGTTGGGAATCTGATAAGTTGATCTTCCCTGTCAGTAAGGATTTGTCACTTGTAGTTG
AGCTTCGCCTTGTGAGTTTCATTTCAAGGGGTTGTGATTTGGATTTGAATTTACCATGGA
TGAAGCTCCTTGCAGCGTCAATGCACTGCCTCCGTTTATTGCAAAGATATATGAAATGGT
GGATGATCCCTCCACTGATCCAATAGTCTCATGGAGTTTAAACAATAAAAGTTTTATTGT
TCGTAATCCTCCTGATTTTGCAAGAGATTTGTTGCCCAGATACTTTAAGCACAATAATTT
TTCCAGCTTTATCCGACAGCTGAATACTTACGGATTCAAGAAAATAGATCCCGAACAATG
GGAATTCGCAAATGAGGATTTTCTTAGAGGTCAGCCACACCTTTTGAAGAATATCTATAG
ACGGAAACCTGTTCACAGTCATTCTGTACAGAATATTCATAGCCTCTCATCATCTGCATT
GACCGAATCGGAAAGACAAGGGTATAAGGAAGATATTGAAAAGTTGAAGCATGAGAACGA
ATCACTTCATTTAGTTCTACACAGGCATAAACAGGATCATCAAGGACTTGAAATGCAAAT
GCAGGTCCTTAACCAACGTGTCCAACAAGTGAAAGACCGGCAAAAGAACGTGCTGTCTAC
TTTAGCTCGAACCATAAATAAACCAGGATTAGCTTTGAGTCTCATGCCACAACTGGAAAT
GAATGAAAGGAAGAGAAGGTTGCCAGGAAACAGTTTTCTTTACAATGAAATAGGCCTGGA
AGATAATCAAGCGAGTTCTTCTGAAAATACGACTAGGGAAAATATGGACCATACTTCTCT
TTCGACTCTCAACAAGGAAGTGCTAGATCAGTTGGAATCTTCTTTGACCTTTTGGGAGTA
TACACTGCGTGACATTGATCAAACTAGAATGAGACGGAGCTCTTCAATAGACTTGGATGA
ATCTATCAGTTGTGCCGATAGCCCTGCTATATCTTACCCACAACTAACTGTTGATGTTGG
ATCTAAGGTTTCTGATATTGACATGAACTCTGAGCCTAATGGAAACACTACTCCTGATGT
TACTCCGCCAGAAAACCGAGTAGAGACTGCTAGTCACAATGTGCCAACAGGAGTAAATGA
TGTATTCTGGGAACAATTCCTTACTGAGAACCCTGGTTCTACTGATGTAAAGCCGGAGAG
AGAAGATATGGAGAGCAAAATAAGTGAATCCAAAACAGTTGAGGATGGGAAATTTTGGTG
GAACAGGAAGACTGTAATTAGCCTTACAGAACAGTTGGGACATCTTACTCCAGCAGAGTG
AATGTAATGTGGCAGGGTATGTACTATTTTTGATAGTAAATGTTTATTTGCCTGTTTCTT
GTTGTAAATTTAGAGAAAGTGATTTGTCTGAGTACATAGAATTTTGGTATATTAACCTTC
TTTTTTTTTGTTTTTGCATGACATGATGTAGTGAATGATAGAGTCGATCAGTCTTAATGC
TAGTCTGGCACAATTTCATGTATTATGTAGTTATATTCTTTCCAGCCTTGCCTGTCCATG
TTGCCGATTTGTGTTACATAAGATGAGAGTAATTTTTCTAGCACTATGTTAATGCAATCC
TTTTGCTTTATTTCTCTTGTTATCCTTGTATGAATATGCAATGTTTGTATGAGTCGTCGT
TCCAGCATTTAAATCCCAAATCAGTTGGGGTAGGCTATATATGATTCTATTATATTCTTC
TGCTCAGGGTGTTCAGTTGTTTCATGCTATTAATAGAAACACACGACGTGTGTTATACTG
TCTATACTGATTCTGGATATGTTATGGTTGTGGATATCTTTTATGATTCTCGATCTGTTA
GCATTTAAACTAATTCCTCCGTGCCCCTAAGAATGGTTTACCAGAGCTCGGCTAGATTCC
TATGAGGTAATAGTTGCTGCTCGATGTGTTCAGTAACTCAGACGTTCTTGATTGTTAAAA
CGTTTGTTGACTGTACACCTGATATTTGTATTGCTTCTTCATTAGACAATCAATTGTGTC
AATTTATTTCTGTTTGATGATTCTTGTTTCCAGTTTCGCACATTTGATTACTAGTGTATA
ATTTGATTACGAAACGATGTGTTTAATCTCTCCTATGTCAACAAAGTCTAAAAGGATAGA
CTTTGTTGATGTATAAATAGAATTTTGTTCTGAAATATATTGTTGGTCTGAAGATGAGAA
AATTGTTAGCCTAGATGTGTTTCCTTTTTTAAAAAAAGAAGATATCTCACT