Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005930.3.1
CDS Infomation

RNA ligase/cyclic nucleotide phosphodiesterase family protein (AHRD V3.3 *** A0A061GEN8_THECC)
Sequence

ATGCAGAATGTACAAATCAAAGAAGCTGAAACCAACAAAACTGACGTTTATTCAGTTTGG
GCGATTCCATCGGAAGATGTAAGTGTTAGGGTTAAGAAATTGATGGGTAGTCTTAGATCG
GAATTTGGTGGGCCCCAATTTGAACCTCACGTGACTGTCGTCGGAGCGGTGAGGTTAACG
GAGGAAGAAGCACGTGACAAGTTTAGAAAAGGATGTGAAGGGGTGAAGAAGGTGTATAGT
GGTACTGTGGAGAAAATTGATATTGGGACTTTTTTTTATCAATGTGTTTATCTTTTGCTT
CATCCAACTAATGAGGTTGTGGAGGCTAGCGCACGCTGCTGCAGCAGCTTTGGTTACAAC
AGCTCAAGTCCATATATGCCTCATATGAGCATTCTTTATGCCGATTTGACGGATGAAGAA
AAGAAGAAAGCTCAAGAGAAGGCTTATATCCTTGATGAGAGCATTGGCAACTTAAGCTTC
CAGATATCTCGCCTTGCATTGTATAAAACAGACACCGAAGACAAAAGCCTTAAATCGTGG
GAGAAGATTGAAGAGTACAATCTCAGCTAG

Peptide Sequence

PEP ID

Solyc03g005930.3.1
PEP Infomation

RNA ligase/cyclic nucleotide phosphodiesterase family protein (AHRD V3.3 *** A0A061GEN8_THECC)
Sequence

MQNVQIKEAETNKTDVYSVWAIPSEDVSVRVKKLMGSLRSEFGGPQFEPHVTVVGAVRLT
EEEARDKFRKGCEGVKKVYSGTVEKIDIGTFFYQCVYLLLHPTNEVVEASARCCSSFGYN
SSSPYMPHMSILYADLTDEEKKKAQEKAYILDESIGNLSFQISRLALYKTDTEDKSLKSW
EKIEEYNLS*

Transcript Sequence

Transcript ID

Solyc03g005930.3.1
Transcript Infomation

RNA ligase/cyclic nucleotide phosphodiesterase family protein (AHRD V3.3 *** A0A061GEN8_THECC)
Sequence

AAAATATATTTAAATATACTCCACTTGTTGAACATAATGCCATTTTCCACAATTAAAAAG
AAAAAAAACCCAGCTAAACCATCTCTGTAATATTCCATCAACTTCTCAACCATCTCTGTA
AACAAAAAAAAAATCAAATCTTTTTAAAAATGGATTTTCTCAAATCCCTTAATCATCATC
TTCTTCATGCTCAATAACATTTTCATAATCAAATTCCTTTCATTTCTTGGTCTCATAGCA
ATTTTTTTACTCTTTTATTCGATTCTCACAGTACCAGATCCAATGCAGAATGTACAAATC
AAAGAAGCTGAAACCAACAAAACTGACGTTTATTCAGTTTGGGCGATTCCATCGGAAGAT
GTAAGTGTTAGGGTTAAGAAATTGATGGGTAGTCTTAGATCGGAATTTGGTGGGCCCCAA
TTTGAACCTCACGTGACTGTCGTCGGAGCGGTGAGGTTAACGGAGGAAGAAGCACGTGAC
AAGTTTAGAAAAGGATGTGAAGGGGTGAAGAAGGTGTATAGTGGTACTGTGGAGAAAATT
GATATTGGGACTTTTTTTTATCAATGTGTTTATCTTTTGCTTCATCCAACTAATGAGGTT
GTGGAGGCTAGCGCACGCTGCTGCAGCAGCTTTGGTTACAACAGCTCAAGTCCATATATG
CCTCATATGAGCATTCTTTATGCCGATTTGACGGATGAAGAAAAGAAGAAAGCTCAAGAG
AAGGCTTATATCCTTGATGAGAGCATTGGCAACTTAAGCTTCCAGATATCTCGCCTTGCA
TTGTATAAAACAGACACCGAAGACAAAAGCCTTAAATCGTGGGAGAAGATTGAAGAGTAC
AATCTCAGCTAGCACTAACTAGTTCTAACAACACTGTTAACTCTCCGCGAGCTGAAACTC
TTTGCTCAAGAAAACGCGGCGTACCTTATCTTTACCTTAATTTTCATTGCCAGCAACTTT
TTTCAAGTCTTATACATGAGAAAACTGTGCTGTTGGGGCTTCCTTTTTCTGTATATTTTG
GGTTTTGCAAAACTTCCAGGAGTTATTAATCATATACGACCATATAAAGCGTTGCAACTG
CCATTTTTTGGTCTTTATTTAAGCTGTCAAGAATTTCATAGTACCAGTCCAACATAGCTG
TATGGAGTACCAATCAAGAGGTTCTCTTTAACCAGTGTTGTTTTTTCGATGTGAATCTAA
ATTTAATCGAACGCTA