Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005730.3.1
CDS Infomation

Aconitate hydratase (AHRD V3.3 *** A0A059LL79_9CHLO)
Sequence

ATGGCGGCGTCTTCAGCTATAGCTTCAAGTTCTACAACTTTCATCAATAAGAGAATTGTT
TCTGTGATGACACCTCAGCAGACTGAAAGAAAACCTGCCACAACTGGATCAGTAAAGACT
GGTATGACTATGACTGAGAAGATATTAGCTAAGGCTTCTGATAAGCCTGATGTGAGCCCT
GGTGATAATGTCTGGGTGAATGTTGATGTTCTGATGACTCATGATGTTTGTGGCCCTGGC
TCTATTGGAATTTTCAAGAAAGAGTTTGGACAGAATGCTAAGGTCTGGGATCGTGAAAAG
CTTGTCATTATACCTGACCATTACATATTCACAACCGACGAACGAGCAAACCGTAACGTG
GATATCTTGAGGGATTTCTGCAATGAACAAAATATTAAGTACTTCTATGACATTAAAGAT
TTGGGGAACTTCCGTGCTAATCCTGATTACAAGGGTGTCTGCCACGTTGCTCTTGCACAA
GAAGGTCACTGCAGACCTGGAGAGGTTTTGCTGGGTACAGACTCCCACACATGTACTGCT
GGAGCTTTTGGGCAATTCGCCACTGGAATTGGCAATACTGATGCAGGTTTTGTGTTGGGT
ACTGGCAAGATTCTGCTCAAGGTGCCTCCAACTTTGAGATTTGTAATGGATGGTGAAATG
CCTGATTACTTGCTTGCTAAGGACTTAATTTTGCAAATTATTGGTGAAATTTCAGTGGCT
GGTGCTACTTATAAAGCAATGGAGTTTGTTGGCACGACAGTTGAAAGCTTGACTATGGAA
GAAAGAATGACATTATGCAACATGGTTGTTGAAGCTGGTGGAAAAAATGGTGTCATCCCA
GCTGATAAAACAACATATGACTACCTTGAGGGAAGGACTTCTGTGCCCTATGAACCTGTT
TATAGTGATGAAGGAGCCAGATATCTTAAGGAGTACAGATTTGATGTTTCCAAGTTGGAG
CCCTTAGTGGCTAAGCCTCATTCTCCTGATAATCGTGCTTTGGCAAGAGAATGCAAAGAT
GTCAAAATCGATAGAGTATATATTGGATCTTGTACTGGTGGAAAGACAGAGGACTTCATG
GCTGCTGCAAAAGTTTTTCTAGCTTCCGGAAAGAAGGTAAAGGTTCCCACTTTCCTTGTT
CCTGCTACCCAAAAGGTATGGATGGATGTATATAGCCTCCCAGTTCCAGGATCAGGTGGC
AAAACATGTTCCCAGATTTTTGAGGAGGCAGGTTGCGATACACCTGCAAGTCCTAGTTGT
GGTGCTTGTTTGGGTGGCCCTAAAGACACTTATGCACGCATGAATGAAGCTCAGGCAAGA
TATTTCATAGCGAAATTTTCCTTGAGCAGGAATAACTTAGTCTGTGTATCAACCACGAAT
AGGAACTTCCCTGGTCGAATGGGACACAAGGAAGGCCAGATTTATCTTGCATCTCCGTAT
ACAGCTGCAGCATCAGCATTGACCGGTTATGTCACTGATCCCCGAGAGTTTTTGCAGTGA

Peptide Sequence

PEP ID

Solyc03g005730.3.1
PEP Infomation

Aconitate hydratase (AHRD V3.3 *** A0A059LL79_9CHLO)
Sequence

MAASSAIASSSTTFINKRIVSVMTPQQTERKPATTGSVKTGMTMTEKILAKASDKPDVSP
GDNVWVNVDVLMTHDVCGPGSIGIFKKEFGQNAKVWDREKLVIIPDHYIFTTDERANRNV
DILRDFCNEQNIKYFYDIKDLGNFRANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTA
GAFGQFATGIGNTDAGFVLGTGKILLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVA
GATYKAMEFVGTTVESLTMEERMTLCNMVVEAGGKNGVIPADKTTYDYLEGRTSVPYEPV
YSDEGARYLKEYRFDVSKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFM
AAAKVFLASGKKVKVPTFLVPATQKVWMDVYSLPVPGSGGKTCSQIFEEAGCDTPASPSC
GACLGGPKDTYARMNEAQARYFIAKFSLSRNNLVCVSTTNRNFPGRMGHKEGQIYLASPY
TAAASALTGYVTDPREFLQ*

Transcript Sequence

Transcript ID

Solyc03g005730.3.1
Transcript Infomation

Aconitate hydratase (AHRD V3.3 *** A0A059LL79_9CHLO)
Sequence

ATGGCGGCGTCTTCAGCTATAGCTTCAAGTTCTACAACTTTCATCAATAAGAGAATTGTT
TCTGTGATGACACCTCAGCAGACTGAAAGAAAACCTGCCACAACTGGATCAGTAAAGACT
GGTATGACTATGACTGAGAAGATATTAGCTAAGGCTTCTGATAAGCCTGATGTGAGCCCT
GGTGATAATGTCTGGGTGAATGTTGATGTTCTGATGACTCATGATGTTTGTGGCCCTGGC
TCTATTGGAATTTTCAAGAAAGAGTTTGGACAGAATGCTAAGGTCTGGGATCGTGAAAAG
CTTGTCATTATACCTGACCATTACATATTCACAACCGACGAACGAGCAAACCGTAACGTG
GATATCTTGAGGGATTTCTGCAATGAACAAAATATTAAGTACTTCTATGACATTAAAGAT
TTGGGGAACTTCCGTGCTAATCCTGATTACAAGGGTGTCTGCCACGTTGCTCTTGCACAA
GAAGGTCACTGCAGACCTGGAGAGGTTTTGCTGGGTACAGACTCCCACACATGTACTGCT
GGAGCTTTTGGGCAATTCGCCACTGGAATTGGCAATACTGATGCAGGTTTTGTGTTGGGT
ACTGGCAAGATTCTGCTCAAGGTGCCTCCAACTTTGAGATTTGTAATGGATGGTGAAATG
CCTGATTACTTGCTTGCTAAGGACTTAATTTTGCAAATTATTGGTGAAATTTCAGTGGCT
GGTGCTACTTATAAAGCAATGGAGTTTGTTGGCACGACAGTTGAAAGCTTGACTATGGAA
GAAAGAATGACATTATGCAACATGGTTGTTGAAGCTGGTGGAAAAAATGGTGTCATCCCA
GCTGATAAAACAACATATGACTACCTTGAGGGAAGGACTTCTGTGCCCTATGAACCTGTT
TATAGTGATGAAGGAGCCAGATATCTTAAGGAGTACAGATTTGATGTTTCCAAGTTGGAG
CCCTTAGTGGCTAAGCCTCATTCTCCTGATAATCGTGCTTTGGCAAGAGAATGCAAAGAT
GTCAAAATCGATAGAGTATATATTGGATCTTGTACTGGTGGAAAGACAGAGGACTTCATG
GCTGCTGCAAAAGTTTTTCTAGCTTCCGGAAAGAAGGTAAAGGTTCCCACTTTCCTTGTT
CCTGCTACCCAAAAGGTATGGATGGATGTATATAGCCTCCCAGTTCCAGGATCAGGTGGC
AAAACATGTTCCCAGATTTTTGAGGAGGCAGGTTGCGATACACCTGCAAGTCCTAGTTGT
GGTGCTTGTTTGGGTGGCCCTAAAGACACTTATGCACGCATGAATGAAGCTCAGGCAAGA
TATTTCATAGCGAAATTTTCCTTGAGCAGGAATAACTTAGTCTGTGTATCAACCACGAAT
AGGAACTTCCCTGGTCGAATGGGACACAAGGAAGGCCAGATTTATCTTGCATCTCCGTAT
ACAGCTGCAGCATCAGCATTGACCGGTTATGTCACTGATCCCCGAGAGTTTTTGCAGTGA
AGTTCCTCGATGACCTCGTTTTAGGAGTTTGGATTATGTTGTACACTAACAGATGAGTGA
ATCTTGAGCTTTTGATGCTTATATATTCCTGAGAAAGGTCGCGCTCGATGTGTTTCTCTT
TTTTCTCTTTACTCCCAAGAAATGAATGCTCTTCTGCATTAAAATGAGAACTCCTTGATT
CCTAATTTCTGTCTTCTTTGTTGTATTCTTGGAGTCTTATTGTTAAAAGCATTGAAATAA
GAATTTGTTTCTGGAAATAATTACTCCTTTTTTTGTTTTTCTTCCTTGAAGTAGTAATAG
CAAGACA