Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g005650.1.1
CDS Infomation	CC-NBS-LRR class disease resistance protein, putative (AHRD V3.3 *** A0A061F8A3_THECC)
Sequence	ATGGAGAAATTAGCTGCAACGATGAAGCTTGAACAATTGGCTTTGGCTAAAGAAACACAA CTAATTGGATCAAAGGCATACGAAGAAATCATGGAAACAGTTCATTGTATCAAGAATTTG GAAACAACAGATAGGGAGCAAGTAAATGAAATCGAAGAGCACGTCTATAGGGTGGAGAAT GCGATCCAAACTTATGGCGTTAGATCAAAATCCAATTTATTTTTAAACAGACATGGTGCT GCCCAGAAAAAGGCCATGACTGATATCACGAGTTTGTGTCGGGTGATGAAAGGAATTGCT CTATTGCAAAAGTCCAACAACAACCAACAATTGATGAGGCAAAACAACAAGTTCGTTTAC AACCATGAAGACGGTGCAGTTGTTGTTGGAATGGAGGACGAAAAAGAGGAGATAATACAA GTTTTGTTACTTAATTCACAAGTATCATCAGAAGTCGATTTCCAAGCAGTTCCCATATGG GGACGTAGTGGCATGGGAAAGGCTACACTTGTTAATGAAATATACAACGACCCTCGCATT GTTAAAGAGTTTGGACATCCTCATCTTGTCAATATTCGTCTATCTGAAAACATCAATGCC CATGACGCACTTCAACATGTTTTCGAGTTGTTTGAAGGAAGTCGTATAGATGACAAGTAT GTTGACATGTCCACAACTAGTTTGGAAGATTGTGTCAGACAACATCTTGAAATGTCAAGG ACGTTGATTGTTCTACAAGGAGTAGGCTCAATTGATGATTGGCGGATGTTGCGTTCTGTC CTGGGAGCTAAAGGTTGCATCATACTGATTACGACTCGAGCAAGACAAGTAGCAGAAAGT ATAACTCAAGCAATTCATATTCATGAAAAGAGGCCTTTAACTGAAGAAAACAGCTGGAAG TTATTTAAGGAGATGGTTTGGCCAGGAGGAGCTGAAATCCAATCGGCAATATTGGAGAGA ATGGTAAAACTGTGTGAAGGTATACCTGGGGCGATTATTGCACTTGCGAAACAGTTAGCA GGAAAGAATGCAAGTGAGTGGGAGATCACAGAGCAGAAAAATGCACGACGAGATGTTTCC CAAGTTATGGCTCCAAGTTATGCTGAGTTGCTGGATGATCAAAAACTATATTTTCTATAC TTGGGGCAATTCAGAGAAGATTCACAGATAGAACCAGAGAAGTTGTCTCATTTATGGGAA ATTGAGGGTTTGATATCATCATCATCAAAGGGTCATGAAAGCGGGATGACATTATTGGAC ATAACACAAGAACGATTGAAGGTTCTAGCACAGAAGGGAATGATAGATGTGAGACGGATA ATAGACGTGATCAAGTCTTGCCACCTTGTAGGATTAATGGGAGATATGTGTCTCTCAAAA GCGGAAGAAACAGATTTTCTCAAGGTCATGGATTTATCTAATCAGCTAGCTTCCTTTTCT TTTGGCAGGACGCGTAGGGTCGTGATTTATCTAGGGAAGTATGATGCTGAAATCAAACCA GAGTTAGCTTCAAACATTTGGAGTCTTCGAATCATCAGATCAGTTGTAGGGGAGTTTGCA TGGCCATCCACACTAATGTCAAATATAAAGGAATTCAAGTCGTTAAGGATTCTTGATTTC GGGAGGGTAGACTTTCCAAGAGGGGAACTACCAAAAGGCATTTCTGATCTACAATTCTTG AGGTATCTGAGTTTCGAAGGATGTTTCCTGGCGAAGCTGCATTCGTCTATCAGCAACCTG TCATACTTACAAGTCCTTGATTTGAGAACTCAATACAAAGAAAATGGCAACAACACTATC ATACCATATAATGTGTTTCAGAAAATGGCAAGGTTGCAACATTTGTATCTTCCACTAGTA TTCCAACTGCAAAATGGGAAAAAACTCCGACTTGATGGATTGGCAGAGCTTCAAACACTA AAGAACTTAAACTCCAAGTTGTGTGAGATACGCCATCTCTTCAAATTGAAAAAACTCCGG AACCTAGATGCAAAGGTTGAAGTATGTGTTGAGGATCTTAATTTAATAACTGACTTTATG AAAAGTAGGAGTGATAAGGGGCTTCGTCGTTGCTCCCTTGAAGTTAAAAACTTTGATTGT TATTCAGATACAAAACACTCTGCCTTTCGTGAGATATTAAATTCCGGGGTTCCACCAATA GTGTCTTTTGAGGGTTATATTAAAACGCTACCACCATACTTTGATATCTCTCAAAATTTC ACGGAGATTGTCCTACGTAGCACTCAACTGGAGGAAGATCCAATGCCAACACTAGAAAAA CTCAACAACCTACGGCTTCTGGTGCTCGAAGATGATGCTTTCAAAGTGAATCAGATGGTA TGTTCTGCTTCGGGTTTTCAAGAGCTCAAACACTTGGAACTCTCAAGATTATTCTCATTC GAGAAATGGAGGGTAGAAATTTCAGCCATGCCAATGCTTTCTCATCTCAAAATTGAATAC TGCAATGAACTAGTAACGCTCCCAGATGGTTCAGAATTTCTAGATTCTCTTCAAGAATTC AAGATGATAAAGATGCCTGAGTCATTTACTCAAAAGGTTACTGAGAGATATGATCACAAC CACAAGCGTCCACCTTCTTTCATAGTACTTTGA

Peptide Sequence

PEP ID	Solyc03g005650.1.1
PEP Infomation	CC-NBS-LRR class disease resistance protein, putative (AHRD V3.3 *** A0A061F8A3_THECC)
Sequence	MEKLAATMKLEQLALAKETQLIGSKAYEEIMETVHCIKNLETTDREQVNEIEEHVYRVEN AIQTYGVRSKSNLFLNRHGAAQKKAMTDITSLCRVMKGIALLQKSNNNQQLMRQNNKFVY NHEDGAVVVGMEDEKEEIIQVLLLNSQVSSEVDFQAVPIWGRSGMGKATLVNEIYNDPRI VKEFGHPHLVNIRLSENINAHDALQHVFELFEGSRIDDKYVDMSTTSLEDCVRQHLEMSR TLIVLQGVGSIDDWRMLRSVLGAKGCIILITTRARQVAESITQAIHIHEKRPLTEENSWK LFKEMVWPGGAEIQSAILERMVKLCEGIPGAIIALAKQLAGKNASEWEITEQKNARRDVS QVMAPSYAELLDDQKLYFLYLGQFREDSQIEPEKLSHLWEIEGLISSSSKGHESGMTLLD ITQERLKVLAQKGMIDVRRIIDVIKSCHLVGLMGDMCLSKAEETDFLKVMDLSNQLASFS FGRTRRVVIYLGKYDAEIKPELASNIWSLRIIRSVVGEFAWPSTLMSNIKEFKSLRILDF GRVDFPRGELPKGISDLQFLRYLSFEGCFLAKLHSSISNLSYLQVLDLRTQYKENGNNTI IPYNVFQKMARLQHLYLPLVFQLQNGKKLRLDGLAELQTLKNLNSKLCEIRHLFKLKKLR NLDAKVEVCVEDLNLITDFMKSRSDKGLRRCSLEVKNFDCYSDTKHSAFREILNSGVPPI VSFEGYIKTLPPYFDISQNFTEIVLRSTQLEEDPMPTLEKLNNLRLLVLEDDAFKVNQMV CSASGFQELKHLELSRLFSFEKWRVEISAMPMLSHLKIEYCNELVTLPDGSEFLDSLQEF KMIKMPESFTQKVTERYDHNHKRPPSFIVL*

Transcript Sequence

Transcript ID	Solyc03g005650.1.1
Transcript Infomation	CC-NBS-LRR class disease resistance protein, putative (AHRD V3.3 *** A0A061F8A3_THECC)
Sequence	ATGGAGAAATTAGCTGCAACGATGAAGCTTGAACAATTGGCTTTGGCTAAAGAAACACAA CTAATTGGATCAAAGGCATACGAAGAAATCATGGAAACAGTTCATTGTATCAAGAATTTG GAAACAACAGATAGGGAGCAAGTAAATGAAATCGAAGAGCACGTCTATAGGGTGGAGAAT GCGATCCAAACTTATGGCGTTAGATCAAAATCCAATTTATTTTTAAACAGACATGGTGCT GCCCAGAAAAAGGCCATGACTGATATCACGAGTTTGTGTCGGGTGATGAAAGGAATTGCT CTATTGCAAAAGTCCAACAACAACCAACAATTGATGAGGCAAAACAACAAGTTCGTTTAC AACCATGAAGACGGTGCAGTTGTTGTTGGAATGGAGGACGAAAAAGAGGAGATAATACAA GTTTTGTTACTTAATTCACAAGTATCATCAGAAGTCGATTTCCAAGCAGTTCCCATATGG GGACGTAGTGGCATGGGAAAGGCTACACTTGTTAATGAAATATACAACGACCCTCGCATT GTTAAAGAGTTTGGACATCCTCATCTTGTCAATATTCGTCTATCTGAAAACATCAATGCC CATGACGCACTTCAACATGTTTTCGAGTTGTTTGAAGGAAGTCGTATAGATGACAAGTAT GTTGACATGTCCACAACTAGTTTGGAAGATTGTGTCAGACAACATCTTGAAATGTCAAGG ACGTTGATTGTTCTACAAGGAGTAGGCTCAATTGATGATTGGCGGATGTTGCGTTCTGTC CTGGGAGCTAAAGGTTGCATCATACTGATTACGACTCGAGCAAGACAAGTAGCAGAAAGT ATAACTCAAGCAATTCATATTCATGAAAAGAGGCCTTTAACTGAAGAAAACAGCTGGAAG TTATTTAAGGAGATGGTTTGGCCAGGAGGAGCTGAAATCCAATCGGCAATATTGGAGAGA ATGGTAAAACTGTGTGAAGGTATACCTGGGGCGATTATTGCACTTGCGAAACAGTTAGCA GGAAAGAATGCAAGTGAGTGGGAGATCACAGAGCAGAAAAATGCACGACGAGATGTTTCC CAAGTTATGGCTCCAAGTTATGCTGAGTTGCTGGATGATCAAAAACTATATTTTCTATAC TTGGGGCAATTCAGAGAAGATTCACAGATAGAACCAGAGAAGTTGTCTCATTTATGGGAA ATTGAGGGTTTGATATCATCATCATCAAAGGGTCATGAAAGCGGGATGACATTATTGGAC ATAACACAAGAACGATTGAAGGTTCTAGCACAGAAGGGAATGATAGATGTGAGACGGATA ATAGACGTGATCAAGTCTTGCCACCTTGTAGGATTAATGGGAGATATGTGTCTCTCAAAA GCGGAAGAAACAGATTTTCTCAAGGTCATGGATTTATCTAATCAGCTAGCTTCCTTTTCT TTTGGCAGGACGCGTAGGGTCGTGATTTATCTAGGGAAGTATGATGCTGAAATCAAACCA GAGTTAGCTTCAAACATTTGGAGTCTTCGAATCATCAGATCAGTTGTAGGGGAGTTTGCA TGGCCATCCACACTAATGTCAAATATAAAGGAATTCAAGTCGTTAAGGATTCTTGATTTC GGGAGGGTAGACTTTCCAAGAGGGGAACTACCAAAAGGCATTTCTGATCTACAATTCTTG AGGTATCTGAGTTTCGAAGGATGTTTCCTGGCGAAGCTGCATTCGTCTATCAGCAACCTG TCATACTTACAAGTCCTTGATTTGAGAACTCAATACAAAGAAAATGGCAACAACACTATC ATACCATATAATGTGTTTCAGAAAATGGCAAGGTTGCAACATTTGTATCTTCCACTAGTA TTCCAACTGCAAAATGGGAAAAAACTCCGACTTGATGGATTGGCAGAGCTTCAAACACTA AAGAACTTAAACTCCAAGTTGTGTGAGATACGCCATCTCTTCAAATTGAAAAAACTCCGG AACCTAGATGCAAAGGTTGAAGTATGTGTTGAGGATCTTAATTTAATAACTGACTTTATG AAAAGTAGGAGTGATAAGGGGCTTCGTCGTTGCTCCCTTGAAGTTAAAAACTTTGATTGT TATTCAGATACAAAACACTCTGCCTTTCGTGAGATATTAAATTCCGGGGTTCCACCAATA GTGTCTTTTGAGGGTTATATTAAAACGCTACCACCATACTTTGATATCTCTCAAAATTTC ACGGAGATTGTCCTACGTAGCACTCAACTGGAGGAAGATCCAATGCCAACACTAGAAAAA CTCAACAACCTACGGCTTCTGGTGCTCGAAGATGATGCTTTCAAAGTGAATCAGATGGTA TGTTCTGCTTCGGGTTTTCAAGAGCTCAAACACTTGGAACTCTCAAGATTATTCTCATTC GAGAAATGGAGGGTAGAAATTTCAGCCATGCCAATGCTTTCTCATCTCAAAATTGAATAC TGCAATGAACTAGTAACGCTCCCAGATGGTTCAGAATTTCTAGATTCTCTTCAAGAATTC AAGATGATAAAGATGCCTGAGTCATTTACTCAAAAGGTTACTGAGAGATATGATCACAAC CACAAGCGTCCACCTTCTTTCATAGTACTTTGA