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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005580.2.1
CDS Infomation

11S storage globulin (AHRD V3.3 *** P93079_COFAR)
Sequence

ATGGCTTCTAAGTCCTCTTTCCTATGTTTTTTCTTTTGTTTTCTTGTTGTTTGCCAGATC
AGCTTCGCTCAAATTTTTGAGCGACAACAGATCTGGCAAAGGCTGCAGCATCAGCAGCAG
CATCGGGCACTTAGGTCTAAAACCGAGTGCCAGATAGAGCGTTTGAACGCTCAAGAACCA
AACCGTAGGTTTGAGTCCGAGGCGGGTGTTGTTGAGTTCTGGGATGCTACCCAAGAACAG
TTTGAGTGCGCCGGAGTTCAGGCCGTTAGGCATGAAATCCGGCGCAACGGGCTTTTGTTG
CCTTACTATAGCAACACTCCCCAACTCATCTATATTGTCCAAGGAAGTGGAGTTCATTCA
ACAATATTCCCAGGCTGCGCCGAGACATTTGAAACAGAGTCGCCACTTGATCGTAGGGCA
CAGTCAGGAGATAGAGGGCAGAGATCACTCGATCGTCACCAGAAAGTTAGGCGTTTTCGG
GCGGGAGATATTCTTGCATTGCCTGCTGGAGTTACTCATTGGACATACAATGATGGTGAA
GAACCTATTATTAGTGTCTCACTTATTGACACTTCTAACGTTGCCAATCAACTTGACCTC
ACATTCAGGAAATTCTTCCTAGCTGGAAATCCTCAACGTGGTGTACAACAACAAGTATTA
GGAAGACAACAAGAGACAACTAGCCAATATGGAAGAAGAGGCTCAGAACAAGAGAAAGGA
GGGAACATGTTAAGTGGATTCGATCCTCAAGTTCTCTCTGAGGCATTCAATGTAGACGTG
GAGGTTATACGAAAGATCCAGGAGGAGGCCCCCGAGAGGGGTGTTATTGTCCTGGCTGAG
AACCTTCGGTTCCTCCTCCCGGAGGAGAAAGAAGAAGAAGAAGAAGAAAGAGAATGGCAT
AGTAGAAGAGGATTCCCTCTTAATGGTTTGGAAGAAACTTTTTGCACAATGAAGTTGAGG
GAGAACATTGGCCATCCTACTAGGTCTGACGTGTACAATCCACGTGGCGGACGTATAAGC
ACCGTCAATAGCAACAGTCTCCCTGTCCTTAACTGGCTCCAGCTCAGCGCTGAGAGAGGT
ACCCTCTACAACAATGCTATAGTGGCACCACATTGGAACTTGAACGCTCACTCAATCATC
TATATCATCCGTGGAAGCGGTCGGTTCCAAGTGGTAGGGAACGCGGGAAAGTCCGTGTTT
GATGATCAAGTGAGGCAGGGGCAACTTATCGTCGTGCCTCAAAACTTTGCTATAGTGAAG
AAGGCAGGGGAGCAAGGGCTCGATTACATCGCTTTCAAGACCAATGACAACGCGATGATT
AGTCCGTTAGCCGGACGTTTATCGGCTATCCGAGCCATGCCAGAGGAAGTCCTCATGAAC
TCATACCAAATTTCAAGGCAAGAGGCTAAGAGCTTGAAGTTTAATAGGGATGAACTTAGT
GTTTTTGGACCAGGAGCTAGGTCTAGCAGGCAATATGCCTAA

Peptide Sequence

PEP ID

Solyc03g005580.2.1
PEP Infomation

11S storage globulin (AHRD V3.3 *** P93079_COFAR)
Sequence

MASKSSFLCFFFCFLVVCQISFAQIFERQQIWQRLQHQQQHRALRSKTECQIERLNAQEP
NRRFESEAGVVEFWDATQEQFECAGVQAVRHEIRRNGLLLPYYSNTPQLIYIVQGSGVHS
TIFPGCAETFETESPLDRRAQSGDRGQRSLDRHQKVRRFRAGDILALPAGVTHWTYNDGE
EPIISVSLIDTSNVANQLDLTFRKFFLAGNPQRGVQQQVLGRQQETTSQYGRRGSEQEKG
GNMLSGFDPQVLSEAFNVDVEVIRKIQEEAPERGVIVLAENLRFLLPEEKEEEEEEREWH
SRRGFPLNGLEETFCTMKLRENIGHPTRSDVYNPRGGRISTVNSNSLPVLNWLQLSAERG
TLYNNAIVAPHWNLNAHSIIYIIRGSGRFQVVGNAGKSVFDDQVRQGQLIVVPQNFAIVK
KAGEQGLDYIAFKTNDNAMISPLAGRLSAIRAMPEEVLMNSYQISRQEAKSLKFNRDELS
VFGPGARSSRQYA*

Transcript Sequence

Transcript ID

Solyc03g005580.2.1
Transcript Infomation

11S storage globulin (AHRD V3.3 *** P93079_COFAR)
Sequence

TCATCAACAACAAAGAAGAGTAATTAAAATTATATAAAAAAAAATGGCTTCTAAGTCCTC
TTTCCTATGTTTTTTCTTTTGTTTTCTTGTTGTTTGCCAGATCAGCTTCGCTCAAATTTT
TGAGCGACAACAGATCTGGCAAAGGCTGCAGCATCAGCAGCAGCATCGGGCACTTAGGTC
TAAAACCGAGTGCCAGATAGAGCGTTTGAACGCTCAAGAACCAAACCGTAGGTTTGAGTC
CGAGGCGGGTGTTGTTGAGTTCTGGGATGCTACCCAAGAACAGTTTGAGTGCGCCGGAGT
TCAGGCCGTTAGGCATGAAATCCGGCGCAACGGGCTTTTGTTGCCTTACTATAGCAACAC
TCCCCAACTCATCTATATTGTCCAAGGAAGTGGAGTTCATTCAACAATATTCCCAGGCTG
CGCCGAGACATTTGAAACAGAGTCGCCACTTGATCGTAGGGCACAGTCAGGAGATAGAGG
GCAGAGATCACTCGATCGTCACCAGAAAGTTAGGCGTTTTCGGGCGGGAGATATTCTTGC
ATTGCCTGCTGGAGTTACTCATTGGACATACAATGATGGTGAAGAACCTATTATTAGTGT
CTCACTTATTGACACTTCTAACGTTGCCAATCAACTTGACCTCACATTCAGGAAATTCTT
CCTAGCTGGAAATCCTCAACGTGGTGTACAACAACAAGTATTAGGAAGACAACAAGAGAC
AACTAGCCAATATGGAAGAAGAGGCTCAGAACAAGAGAAAGGAGGGAACATGTTAAGTGG
ATTCGATCCTCAAGTTCTCTCTGAGGCATTCAATGTAGACGTGGAGGTTATACGAAAGAT
CCAGGAGGAGGCCCCCGAGAGGGGTGTTATTGTCCTGGCTGAGAACCTTCGGTTCCTCCT
CCCGGAGGAGAAAGAAGAAGAAGAAGAAGAAAGAGAATGGCATAGTAGAAGAGGATTCCC
TCTTAATGGTTTGGAAGAAACTTTTTGCACAATGAAGTTGAGGGAGAACATTGGCCATCC
TACTAGGTCTGACGTGTACAATCCACGTGGCGGACGTATAAGCACCGTCAATAGCAACAG
TCTCCCTGTCCTTAACTGGCTCCAGCTCAGCGCTGAGAGAGGTACCCTCTACAACAATGC
TATAGTGGCACCACATTGGAACTTGAACGCTCACTCAATCATCTATATCATCCGTGGAAG
CGGTCGGTTCCAAGTGGTAGGGAACGCGGGAAAGTCCGTGTTTGATGATCAAGTGAGGCA
GGGGCAACTTATCGTCGTGCCTCAAAACTTTGCTATAGTGAAGAAGGCAGGGGAGCAAGG
GCTCGATTACATCGCTTTCAAGACCAATGACAACGCGATGATTAGTCCGTTAGCCGGACG
TTTATCGGCTATCCGAGCCATGCCAGAGGAAGTCCTCATGAACTCATACCAAATTTCAAG
GCAAGAGGCTAAGAGCTTGAAGTTTAATAGGGATGAACTTAGTGTTTTTGGACCAGGAGC
TAGGTCTAGCAGGCAATATGCCTAAATGTAAAAAAACTCAAATAATGTAGTGTCTCAAAA
ATCCTATCCTTTATGTTAGGATTTGTTTGGTGAGAGAATAATAAAAAAATGCCTCTTGTA
AAAGGCAATTTGGCGTTCAATTTATCTTTTGAGTGAATCGAGAAATATATTTGATTGTTA
TCTTTCTGATACATATATCAAGCATGGCAT