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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005480.3.1
CDS Infomation

WAT1-related protein (AHRD V3.3 *** K4BDX2_SOLLC)
Sequence

ATGGCTATGAAGAAGTTCAAACCTCATATTCTTATGATTTTAGTACAAATTTGCTACACT
TTACTTTATTTCATTACTGAAGCTTCATTTAGCCATGGGATGAACCCTCATGTCTATGTA
ACTTATCGAAACATCGTGGGAGGTCTAGTTATGTTACCGTTCGCGTATTTTATCGAAAGA
AAAAAGAGAACAAAGTTAACCATGGCTTTGCTATTGGAGTTCTTTGTACTTTCTCTAATG
GGAGTGAGTTTAACATTAAACATGTACTTTGTGAGCTTCAATTTCATTTCTCCAACATTT
ATAGCTTCTATGCTCAACACTATTGCTGCACTCACCTTTGTATTGGCAATAATCCTCAGG
TTGGAAATTGTTAATTTTGAAGACCCTAGAGGAATAGCAAAAATCATAGGAACACTTGTT
TCTTTGGCTGGAGTTATGATTATGACATTGTACAAAGGAGCAGTTTTGAAGAATTTATGG
CATCCTCTCATATATATTCATAAAGGAAACAATGTTATCAAGGAAGATTGGGTCAAGGGC
TCAATTTTGACTGTTGCTAGTTGCATTACATGGGCCATATGGTACATCATGCAGGCTTAC
ACATTGAAAAGATATCCAGCACAATTATCACTAACAACATGGATGAGTTTTGTTGGAGCA
GCACAATCAGCTTTCTACACAGTCATAGTACAACATAAAAGAGCTGCTTGGACTATTGGT
TTCAACATTGATTTTTGGTCTACAATATATGGGGGTATAGTTATTTCTGGTTTGGTGGGC
TATATTCAATTGTGGTGCACAGAGGAAAAGGGACCTGTTTTTGTGACTATGTTCAATCCA
CTATCAACTATATTAGTGGCACTTCTAGCATACTTTGTGTTTGGGGAAAAGCTATATATG
GGCAGAATCATAGGAGCAATAATTGTCATTGTTGGTCTTTATTTGCTTTTGTGGGGAAAA
GAAGATCCAAAATCAGAGAGAAAGGATGAAGAAAAATGCTGCACAACAAAAAAAGAATTA
CATCATGAAGACAATATGATGCAGAAATTCACATCAGATGCTAATCCCAAGGATACTATA
AAACCAAAACAATAAAAATAAAAGACAAAAATTCATATAACGTAA

Peptide Sequence

PEP ID

Solyc03g005480.3.1
PEP Infomation

WAT1-related protein (AHRD V3.3 *** K4BDX2_SOLLC)
Sequence

MAMKKFKPHILMILVQICYTLLYFITEASFSHGMNPHVYVTYRNIVGGLVMLPFAYFIER
KKRTKLTMALLLEFFVLSLMGVSLTLNMYFVSFNFISPTFIASMLNTIAALTFVLAIILR
LEIVNFEDPRGIAKIIGTLVSLAGVMIMTLYKGAVLKNLWHPLIYIHKGNNVIKEDWVKG
SILTVASCITWAIWYIMQAYTLKRYPAQLSLTTWMSFVGAAQSAFYTVIVQHKRAAWTIG
FNIDFWSTIYGGIVISGLVGYIQLWCTEEKGPVFVTMFNPLSTILVALLAYFVFGEKLYM
GRIIGAIIVIVGLYLLLWGKEDPKSERKDEEKCCTTKKELHHEDNMMQKFTSDANPKDTI
KPKQ*K*KTKIHIT*

Transcript Sequence

Transcript ID

Solyc03g005480.3.1
Transcript Infomation

WAT1-related protein (AHRD V3.3 *** K4BDX2_SOLLC)
Sequence

GAAAGAAGGTCAAATTGTGTGTATATAATACAATCTTACACTCCCATTTTATTCCATTTG
TCACTAAATATTCAAGAATAGTTATGTCCATTCTTTAAATCTTCATTCAAAGTTATTTTT
TTCTTCTTTATAACAAACAAGAAACATATTCTATCTTTGTGTGGGAAAAGTATAAAATTA
TTTTCACCACAAGAATATGTTTGATCAAGAACAAGATCCTATCTCTTAAAATTTTGAAGG
GAATCGAACCCCATTCTTAATTCCACATTAATTGTCTATATTAGCTAGTAGTAAATTGTG
GTCATTTTATAAATAAAAAAAAGGGTCATTTTTGCAAAGAATTATGGCTATGAAGAAGTT
CAAACCTCATATTCTTATGATTTTAGTACAAATTTGCTACACTTTACTTTATTTCATTAC
TGAAGCTTCATTTAGCCATGGGATGAACCCTCATGTCTATGTAACTTATCGAAACATCGT
GGGAGGTCTAGTTATGTTACCGTTCGCGTATTTTATCGAAAGAAAAAAGAGAACAAAGTT
AACCATGGCTTTGCTATTGGAGTTCTTTGTACTTTCTCTAATGGGAGTGAGTTTAACATT
AAACATGTACTTTGTGAGCTTCAATTTCATTTCTCCAACATTTATAGCTTCTATGCTCAA
CACTATTGCTGCACTCACCTTTGTATTGGCAATAATCCTCAGGTTGGAAATTGTTAATTT
TGAAGACCCTAGAGGAATAGCAAAAATCATAGGAACACTTGTTTCTTTGGCTGGAGTTAT
GATTATGACATTGTACAAAGGAGCAGTTTTGAAGAATTTATGGCATCCTCTCATATATAT
TCATAAAGGAAACAATGTTATCAAGGAAGATTGGGTCAAGGGCTCAATTTTGACTGTTGC
TAGTTGCATTACATGGGCCATATGGTACATCATGCAGGCTTACACATTGAAAAGATATCC
AGCACAATTATCACTAACAACATGGATGAGTTTTGTTGGAGCAGCACAATCAGCTTTCTA
CACAGTCATAGTACAACATAAAAGAGCTGCTTGGACTATTGGTTTCAACATTGATTTTTG
GTCTACAATATATGGGGGTATAGTTATTTCTGGTTTGGTGGGCTATATTCAATTGTGGTG
CACAGAGGAAAAGGGACCTGTTTTTGTGACTATGTTCAATCCACTATCAACTATATTAGT
GGCACTTCTAGCATACTTTGTGTTTGGGGAAAAGCTATATATGGGCAGAATCATAGGAGC
AATAATTGTCATTGTTGGTCTTTATTTGCTTTTGTGGGGAAAAGAAGATCCAAAATCAGA
GAGAAAGGATGAAGAAAAATGCTGCACAACAAAAAAAGAATTACATCATGAAGACAATAT
GATGCAGAAATTCACATCAGATGCTAATCCCAAGGATACTATAAAACCAAAACAATAAAA
ATAAAAGACAAAAATTCATATAACGTAAACACGCGATTCTAATCTGAATTAGTCGGACCA
GTAATTTTCAAGCTGTTACAAATAACATGTCATTTGATTGTATAATCGTTTTCATTAGAG
AACATTAAAGAAAATCCTTAAAAGATCATACTCTTCTATACATAAAAAAAAAAGTACCGT
CCTTACTTCATAATAGATGGATTTGAAAGAAATATTTTAAATAGTCATTTTGACGAGAG