Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005440.3.1
CDS Infomation

Agenet domain protein (AHRD V3.3 *** G7JN46_MEDTR)
Sequence

ATGGGGAAGGAGGATCAATTGCCTTTCAAAGTTGGGCAATCCGCTGAAGCACAATCTTTT
GAGAATGGATTTCGTGGGGCATGGTTTCGATGTAAGATACAGAAGATTAGCTGCAGAAAA
GGACATTGGAATGCCCTGTTGGAATACTTCGATTATCCAGATGAAAAACTGACTTGGACC
AAGCTGTATCAAAATCCCCCATATAATGTCGGGAAGGTTAAGGAGAAAACACAACTAATG
CTGCGACCGCAGTATCCTTTAGTCAAGGTCAAAACTGAAGTATCAAATTTCAGTTCAACT
TCTGAAACTACAGTAGTTGTTGATGGCAATTGGCAGGCAGGTGATTTGGTTGATTGGTGG
GCTAATGGCTGTTATTGGTCTGGACATCTGACAAAGTTACTTGGCAACAATGAAGCTGAG
TTGGCATTGACACCACCTCCTGTGGGTGAAGGTGCACTTTATGAAGTTTCTTTCAAGGAT
TTGCGTCCATCCTTAGAATGGTCTCCAGATTTTGGTTGGACTGTGCCTACATCCCAGGAT
GGTGTACGTCGATGTGCTCAACTAGTTCAACCTGTCAACCGAGCATTACATTCTATGAGT
ACAGGGAGAACTGGATATTCATCAGATCTCTCTTTCTCTATTCATTCAACTGCAAACTTG
TCGCCTGCCTCGGATGATACAGACTTAGCAGAACGACCCCCGATCATAGATCTTCCTAAG
GAGGCAGCTGTGAACACATTGAAGAAAGTGAGGCAGTCAGACATTTGTTCTAGTTCCCAT
ACTGGAGATGAATCGACAAAGGAATCCTTTTTTTCAGATAAAGGTTCTGGTTCTTGTACT
GGAGTTGATCTAGCAAAAACCACTGCTGGGCCAACTGAAAACTTTAGCTATTCAAGTTGT
CCTTTGAAGAAGTTCAGAACCAGTGATGGAGTTCAGTTACATTCAACTGGTTCTGACACG
ACAGAGGCAGCGATATTGGATTTGGAGGAACTTGTGAACAAAATTAAATGGCTGAAGGGA
CTGCTCGAGTTAGGAAAACCCATGTCTAATGTTGCCATACCTTCATGGAAGTTCGTGGAA
CATCATGCATCATTCGGAAATAAATGA

Peptide Sequence

PEP ID

Solyc03g005440.3.1
PEP Infomation

Agenet domain protein (AHRD V3.3 *** G7JN46_MEDTR)
Sequence

MGKEDQLPFKVGQSAEAQSFENGFRGAWFRCKIQKISCRKGHWNALLEYFDYPDEKLTWT
KLYQNPPYNVGKVKEKTQLMLRPQYPLVKVKTEVSNFSSTSETTVVVDGNWQAGDLVDWW
ANGCYWSGHLTKLLGNNEAELALTPPPVGEGALYEVSFKDLRPSLEWSPDFGWTVPTSQD
GVRRCAQLVQPVNRALHSMSTGRTGYSSDLSFSIHSTANLSPASDDTDLAERPPIIDLPK
EAAVNTLKKVRQSDICSSSHTGDESTKESFFSDKGSGSCTGVDLAKTTAGPTENFSYSSC
PLKKFRTSDGVQLHSTGSDTTEAAILDLEELVNKIKWLKGLLELGKPMSNVAIPSWKFVE
HHASFGNK*

Transcript Sequence

Transcript ID

Solyc03g005440.3.1
Transcript Infomation

Agenet domain protein (AHRD V3.3 *** G7JN46_MEDTR)
Sequence

AATTTCAAATAAAGTAATCTATTTTTATTGTTAGGGCTAAACACCCACTTACTACTCGGG
TTGTACCTGGAAAATACCCCTAAGAAGCAAGATAGCCTTATTATAGGTTCAATCTAGTGC
TGATATCATGGGGAAGGAGGATCAATTGCCTTTCAAAGTTGGGCAATCCGCTGAAGCACA
ATCTTTTGAGAATGGATTTCGTGGGGCATGGTTTCGATGTAAGATACAGAAGATTAGCTG
CAGAAAAGGACATTGGAATGCCCTGTTGGAATACTTCGATTATCCAGATGAAAAACTGAC
TTGGACCAAGCTGTATCAAAATCCCCCATATAATGTCGGGAAGGTTAAGGAGAAAACACA
ACTAATGCTGCGACCGCAGTATCCTTTAGTCAAGGTCAAAACTGAAGTATCAAATTTCAG
TTCAACTTCTGAAACTACAGTAGTTGTTGATGGCAATTGGCAGGCAGGTGATTTGGTTGA
TTGGTGGGCTAATGGCTGTTATTGGTCTGGACATCTGACAAAGTTACTTGGCAACAATGA
AGCTGAGTTGGCATTGACACCACCTCCTGTGGGTGAAGGTGCACTTTATGAAGTTTCTTT
CAAGGATTTGCGTCCATCCTTAGAATGGTCTCCAGATTTTGGTTGGACTGTGCCTACATC
CCAGGATGGTGTACGTCGATGTGCTCAACTAGTTCAACCTGTCAACCGAGCATTACATTC
TATGAGTACAGGGAGAACTGGATATTCATCAGATCTCTCTTTCTCTATTCATTCAACTGC
AAACTTGTCGCCTGCCTCGGATGATACAGACTTAGCAGAACGACCCCCGATCATAGATCT
TCCTAAGGAGGCAGCTGTGAACACATTGAAGAAAGTGAGGCAGTCAGACATTTGTTCTAG
TTCCCATACTGGAGATGAATCGACAAAGGAATCCTTTTTTTCAGATAAAGGTTCTGGTTC
TTGTACTGGAGTTGATCTAGCAAAAACCACTGCTGGGCCAACTGAAAACTTTAGCTATTC
AAGTTGTCCTTTGAAGAAGTTCAGAACCAGTGATGGAGTTCAGTTACATTCAACTGGTTC
TGACACGACAGAGGCAGCGATATTGGATTTGGAGGAACTTGTGAACAAAATTAAATGGCT
GAAGGGACTGCTCGAGTTAGGAAAACCCATGTCTAATGTTGCCATACCTTCATGGAAGTT
CGTGGAACATCATGCATCATTCGGAAATAAATGATGGATGGTTTCAAAATATCGAAATGT
CATCTGGTGGCTCTTGAAAAAAATGAGGTATAAAGCTTCTACGTGTATTGCTCATTCCGT
GCAGGTTTTATACACCTTCCATAGTTTAAGAAGCTGCTTGACGTGAAATTTGGATGCATC
CCATGTTAAGGTTTCAAGTCTCGTTGCGATGATGCAAAGGCTAGTGCCTTGCCAGCAACA
CTTAAACCGGTATTCTGGCTTCACTAGGGTATGATTTAGAGATGCTCCGACGAGCATGTA
CCATATGCTTTCGTTTAGTCGACAATATGCATCGACTAAAGTATCCATGTTCAATTGGCT
CAACTGCTTACTGCAACATTTTGTTAAAAAAGAAAGCTTGTATAGAGAAGTTTGAAGTGG
AGATGGCAATAATGGATCTCTTTCATTTGAAGCCCTGTGATTCAAGGCTGTTTTTAAATT
GAC