Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005420.2.1
CDS Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

ATGTGGTACCATGTGGCAAAACCATCTGAGTTTTTGGTGATCACTGGCAGAGGAATTGAT
GAATTGAAGATTGCAAAGAAAGCCCTGGTATTACCATTTCAAAAATGCACTAGAATCAAT
GTTTCCCCTTTAAATTACACATTTGAAGTCAATGCCATGAGCGCCGAAAAACTATGTTTC
CTACTCCCTGCCGTTTTCACTATTGGTCCTCGGGCTGATGACCACAACAGCCTTGTCAAA
TACGCGAGGCTTCTTTCTCACTATCAGCGCGATTCTCATGATCTCAAGGAGCTTGTTCAA
GGCATCATTGAGGGAGAAACGCGTGTCTTGGCTGCTTCAATGTCGATGGAAGACGTCTTT
AAAGGCACAAAAGATTTCAAGCGCGAAGTTTTTGGGAAGGTTCAGGTTGAGCTCAACCAA
TTTGGACTTCTGATATATAATGCTAACATTAAGCAACTAGTTGACGTCAGAGGCCATGAG
TACTTTTCATATTTAGGCCAGAAAACTCAAATGGAAGCAGCAAACAGGGCAAAAGTTGAT
GTCGCTGAAGCAAAAATGAAGGGTAATGTTGGAGCCAAACAGAGTGAAGGATTTACCATT
CAAAGTGCTGCAAAGATTGATGTTGAGACGAAGGTAGTAACCACCCAAAGACAAGGTCAA
GGTAAAATGGAGGAGATTAAGGTGGGATCAGAAGTTAAGATTTTTGAGATTCAGCAAGAA
GCTGAAGTGTCTGAGGCGAATGCAAAACTCGCAACTAAGAAGGCAGCATGGTCTCAGCAG
GCGAAGATGGCAGAGGTGGAATCTGATAAAGCCGTGGCAATACGAGAGGCTGAGTTGCAG
CAAAAAGTCGAGCAAACAAATGCCTTGACTAAGACTGAGAACTTCAAGGCTCAATTCCTC
AGCAGAGCTAATGTGGAATATCATATCAAGGTGCAAGAAGTAAATGGGGAGTATTACCAA
AAGCAAAAAGCAGCTGATGCAATACTCTATGAGAAAGAAAAATTAGCAGAGGCTCGAAGG
GTTGAATCGGACGCTGAATCATACGCGAAAAAACAAGCTGCAGATGTTGCGCTTTACACC
AAGACAAAAGAGGCCGAAGGACTTCTGGCTCTTGCAGAAGCACAAGGGATTTACATACGC
ACACTGTTGTCAGCACTGGGAGGAAATTACAGCGCGTTGAGGGATTACTTGATGATTAAC
AAAGGAGTATACAAGGATGTCGCTAAGTTCAACGCTGATGCTATCAGAGGACTGCAACCA
AAGATCAATATTTGGTCAAATGGTGCAAGTGAAGAGAAGATGAGTGATGGAATGAGTGCA
CGAAAAGGAAATGGAGCTATGAAGGAGATGTCCGAACTTTATCGAGTAATCCCTCACTTG
TTACAGACTGTGAATGAGCAAACTAGGATGCTGCCTCCACCATGGCTGAGTACTTGCAGC
ACCAACAAGGCCACACCAAGTGAAACTTAA

Peptide Sequence

PEP ID

Solyc03g005420.2.1
PEP Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

MWYHVAKPSEFLVITGRGIDELKIAKKALVLPFQKCTRINVSPLNYTFEVNAMSAEKLCF
LLPAVFTIGPRADDHNSLVKYARLLSHYQRDSHDLKELVQGIIEGETRVLAASMSMEDVF
KGTKDFKREVFGKVQVELNQFGLLIYNANIKQLVDVRGHEYFSYLGQKTQMEAANRAKVD
VAEAKMKGNVGAKQSEGFTIQSAAKIDVETKVVTTQRQGQGKMEEIKVGSEVKIFEIQQE
AEVSEANAKLATKKAAWSQQAKMAEVESDKAVAIREAELQQKVEQTNALTKTENFKAQFL
SRANVEYHIKVQEVNGEYYQKQKAADAILYEKEKLAEARRVESDAESYAKKQAADVALYT
KTKEAEGLLALAEAQGIYIRTLLSALGGNYSALRDYLMINKGVYKDVAKFNADAIRGLQP
KINIWSNGASEEKMSDGMSARKGNGAMKEMSELYRVIPHLLQTVNEQTRMLPPPWLSTCS
TNKATPSET*

Transcript Sequence

Transcript ID

Solyc03g005420.2.1
Transcript Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

GTCGAATATTTATGCTTATTTAGTGTAACTTTAACATGTATACTTAGTTCGAGCCAAAGT
TTTTGTGTTCGAATGAACTCATAACTTATGCTCTACATACACCCCTGATTGGGTCTCAAC
TCACAAGCATTCTAGTTGAAAATCAAGGCAAGTCTTTTCATCAATTTAGAGCTTTGTATG
ACTGTTGCAGGTCTGATTTTGCATGTACATTTGAATATAAATGAGAATTACTGTTTGTTA
CCTTCACTATACACTCTATCCTCCCTAGACCCTGCCTGTGGAATTACACTGAGAACGTTG
TTGACCCCGAGTCATGAATGCACCACAAATCTTACTACTTGCTTCCCATTTTCACTTAAT
CAATTTGCTTGAAAAAATATGGTCAATTTCTCTTCCTTGTTGATTTTACTTGTGTGTGTA
ACTAGTTCATCAAGTCAAGTAATTCATATACATTGTGCTGAATCTATAGGCATCTTCCTT
TATTCTTTTTTCTTTTTGGGGATTCAACCATGTGGTATCTAGGATCCATTAGTTTGACTA
ATCTGAATTCACGTGTCACGGGCTCTAGTTGAGGGAAAGAGTTCCCACAAGAAATTACTT
CATCTCTAGGCCTTAAACCCCGAAACCTTTGGGTTAAGGGCGCAAAGAGAACCATCCATC
TCACCTCAATCCTTGGTGGTAAAATTTTCCCCCTTAGCACGTCGGTTATCAAATAAGTGA
ACTCTAATTTTCTCTTGAATTTTTGATGTACTGTGCCCGCTTTAGCCAATCATTTAGAAA
TTAAAATGATTATTAGTTGAAACAGAGGTGTTTTCACCACGGCTTTGATGTATAGTAGAA
TTTTTCGCTGATTTGGCTAATAATCGAATGCTTTTGTTGCTTGAATTCTTCAGGAGGCGA
AACAACAAAGATACAGAACAATGTGGTACCATGTGGCAAAACCATCTGAGTTTTTGGTGA
TCACTGGCAGAGGAATTGATGAATTGAAGATTGCAAAGAAAGCCCTGGTATTACCATTTC
AAAAATGCACTAGAATCAATGTTTCCCCTTTAAATTACACATTTGAAGTCAATGCCATGA
GCGCCGAAAAACTATGTTTCCTACTCCCTGCCGTTTTCACTATTGGTCCTCGGGCTGATG
ACCACAACAGCCTTGTCAAATACGCGAGGCTTCTTTCTCACTATCAGCGCGATTCTCATG
ATCTCAAGGAGCTTGTTCAAGGCATCATTGAGGGAGAAACGCGTGTCTTGGCTGCTTCAA
TGTCGATGGAAGACGTCTTTAAAGGCACAAAAGATTTCAAGCGCGAAGTTTTTGGGAAGG
TTCAGGTTGAGCTCAACCAATTTGGACTTCTGATATATAATGCTAACATTAAGCAACTAG
TTGACGTCAGAGGCCATGAGTACTTTTCATATTTAGGCCAGAAAACTCAAATGGAAGCAG
CAAACAGGGCAAAAGTTGATGTCGCTGAAGCAAAAATGAAGGGTAATGTTGGAGCCAAAC
AGAGTGAAGGATTTACCATTCAAAGTGCTGCAAAGATTGATGTTGAGACGAAGGTAGTAA
CCACCCAAAGACAAGGTCAAGGTAAAATGGAGGAGATTAAGGTGGGATCAGAAGTTAAGA
TTTTTGAGATTCAGCAAGAAGCTGAAGTGTCTGAGGCGAATGCAAAACTCGCAACTAAGA
AGGCAGCATGGTCTCAGCAGGCGAAGATGGCAGAGGTGGAATCTGATAAAGCCGTGGCAA
TACGAGAGGCTGAGTTGCAGCAAAAAGTCGAGCAAACAAATGCCTTGACTAAGACTGAGA
ACTTCAAGGCTCAATTCCTCAGCAGAGCTAATGTGGAATATCATATCAAGGTGCAAGAAG
TAAATGGGGAGTATTACCAAAAGCAAAAAGCAGCTGATGCAATACTCTATGAGAAAGAAA
AATTAGCAGAGGCTCGAAGGGTTGAATCGGACGCTGAATCATACGCGAAAAAACAAGCTG
CAGATGTTGCGCTTTACACCAAGACAAAAGAGGCCGAAGGACTTCTGGCTCTTGCAGAAG
CACAAGGGATTTACATACGCACACTGTTGTCAGCACTGGGAGGAAATTACAGCGCGTTGA
GGGATTACTTGATGATTAACAAAGGAGTATACAAGGATGTCGCTAAGTTCAACGCTGATG
CTATCAGAGGACTGCAACCAAAGATCAATATTTGGTCAAATGGTGCAAGTGAAGAGAAGA
TGAGTGATGGAATGAGTGCACGAAAAGGAAATGGAGCTATGAAGGAGATGTCCGAACTTT
ATCGAGTAATCCCTCACTTGTTACAGACTGTGAATGAGCAAACTAGGATGCTGCCTCCAC
CATGGCTGAGTACTTGCAGCACCAACAAGGCCACACCAAGTGAAACTTAATGGTTTCTCA
CATAACCTTGATACCTATCTTGCAAGTAAATATTGTTGGTTCATTGGGAAGTGAGGGAAA
TAATTTTAGATTACTATATGCTTCAGTAAGTATGATGTTCACAAAGAAAACTTTTTCCTT
GGTATCACACCTGGACCACTCTA