Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g005310.3.1
CDS Infomation

Armadillo repeat-containing protein LFR (AHRD V3.3 *** LFR_ARATH)
Sequence

ATGCAGAAGCGGCAAAGCGGTGGCGTAGCTGGCGGTGGCTCAGCTACTCCGGTAGCTAAG
AGAGGACGTCCGTTAGGTAGCGTAAACAGTAACTCCGCCGCTGCCTCTGCTACCGCGGCA
GCCGCATCCAGTGCTGCCGACTCAGTAGCTCCGCCAACGCTTCTCGGACCTTCGCTTCAT
GTTCACTATGCATTTGCTGGTCAGTTAGTGCCTTATCGAACCTTTCATGCAAAGCTCACC
GAAGAAAACAAGTCCAAAGCGCACTTCGTTGCTCAACTTAGTAATTATTTTACTTGTATT
GCCAAAAGGTATGATGTAGATGTCAATGGAATGGAATGGACCATGGAGATAAATGTGCAA
AGCCCATCGAATCAGAATAATAAAAGGATTGTTCTGGCACTTCAAAGTGGATTGAAGAGT
GAGCTGACGTGGGCATTAAACGCTCTCACTTTGCTATCATTTAAAGAGAAAGATGAAGTC
CGCAAAGATGCAACCCCTCTTGCGAAAATTCCTGGGTTGCTTGATGCTCTACTTCAAGTT
ATAGATGACTGGCGTGATATAGCGTTACCAAGGGTGCTTGTGAAGACACCACGTGTTCGA
CTATTGGGTGCAAATTCAGCTGTTACTGGATTTGGAAATGAATATGAGGCCTTGAACTCG
GATAATAGCTTACCTCATCCTAGTACTGGATCTGGATCCTCCAACAAAGAGGCATCTGTT
CTGAAGTGTGCTAACAAGCTTCGCCCTGGAGCCTGGAATTTTGATGAAGATGGCCTATTT
AACTTGGATGAGGAGGGGCGTGCTGAGAAACAGCTGTGTGCTGTCGCTGCTTCAAACATT
ATCCGCAACTTCTCTAACATGCCAGATAATGAAGTCATCATGGCGCAGCACAGGCATTGC
TTTGAAACCATATTTCAATGTCTTGAAGATTATGTTACAGGTGGGGAAAGAGAGGATGAG
GAACTTGTCACAAATGCCCTTGAGACTGTAGTGAATTTGGCTTTGTTGCTGAATCTTCGG
ATCTTTAGCTCCTCAAAACCTTCTTTTATCAAAATGACGGAGAAACGTGCAGTCAAGGCT
CTCATGGGAATGCTGGGATCTGCTGTGAAGGCTTGGCACTCTGGCGCTGCTGAATTAATT
GGTCGTCTTATAATAAATCCTGACAATGAACCTTTCCTACTTCCTTTTGCTTCACAGATA
TATACACGTTTGGTCGATATAATGAGCTCTCCACCAACTGATGCTCAAGCAGCTGCTGTA
GGTGCATTATATAACCTTGCAGAGATAAATATGGACTGCCGTTTAAAGCTGGCCAGTGAG
CGATGGTAA

Peptide Sequence

PEP ID

Solyc03g005310.3.1
PEP Infomation

Armadillo repeat-containing protein LFR (AHRD V3.3 *** LFR_ARATH)
Sequence

MQKRQSGGVAGGGSATPVAKRGRPLGSVNSNSAAASATAAAASSAADSVAPPTLLGPSLH
VHYAFAGQLVPYRTFHAKLTEENKSKAHFVAQLSNYFTCIAKRYDVDVNGMEWTMEINVQ
SPSNQNNKRIVLALQSGLKSELTWALNALTLLSFKEKDEVRKDATPLAKIPGLLDALLQV
IDDWRDIALPRVLVKTPRVRLLGANSAVTGFGNEYEALNSDNSLPHPSTGSGSSNKEASV
LKCANKLRPGAWNFDEDGLFNLDEEGRAEKQLCAVAASNIIRNFSNMPDNEVIMAQHRHC
FETIFQCLEDYVTGGEREDEELVTNALETVVNLALLLNLRIFSSSKPSFIKMTEKRAVKA
LMGMLGSAVKAWHSGAAELIGRLIINPDNEPFLLPFASQIYTRLVDIMSSPPTDAQAAAV
GALYNLAEINMDCRLKLASERW*

Transcript Sequence

Transcript ID

Solyc03g005310.3.1
Transcript Infomation

Armadillo repeat-containing protein LFR (AHRD V3.3 *** LFR_ARATH)
Sequence

ATGCAGAAGCGGCAAAGCGGTGGCGTAGCTGGCGGTGGCTCAGCTACTCCGGTAGCTAAG
AGAGGACGTCCGTTAGGTAGCGTAAACAGTAACTCCGCCGCTGCCTCTGCTACCGCGGCA
GCCGCATCCAGTGCTGCCGACTCAGTAGCTCCGCCAACGCTTCTCGGACCTTCGCTTCAT
GTTCACTATGCATTTGCTGGTCAGTTAGTGCCTTATCGAACCTTTCATGCAAAGCTCACC
GAAGAAAACAAGTCCAAAGCGCACTTCGTTGCTCAACTTAGTAATTATTTTACTTGTATT
GCCAAAAGGTATGATGTAGATGTCAATGGAATGGAATGGACCATGGAGATAAATGTGCAA
AGCCCATCGAATCAGAATAATAAAAGGATTGTTCTGGCACTTCAAAGTGGATTGAAGAGT
GAGCTGACGTGGGCATTAAACGCTCTCACTTTGCTATCATTTAAAGAGAAAGATGAAGTC
CGCAAAGATGCAACCCCTCTTGCGAAAATTCCTGGGTTGCTTGATGCTCTACTTCAAGTT
ATAGATGACTGGCGTGATATAGCGTTACCAAGGGTGCTTGTGAAGACACCACGTGTTCGA
CTATTGGGTGCAAATTCAGCTGTTACTGGATTTGGAAATGAATATGAGGCCTTGAACTCG
GATAATAGCTTACCTCATCCTAGTACTGGATCTGGATCCTCCAACAAAGAGGCATCTGTT
CTGAAGTGTGCTAACAAGCTTCGCCCTGGAGCCTGGAATTTTGATGAAGATGGCCTATTT
AACTTGGATGAGGAGGGGCGTGCTGAGAAACAGCTGTGTGCTGTCGCTGCTTCAAACATT
ATCCGCAACTTCTCTAACATGCCAGATAATGAAGTCATCATGGCGCAGCACAGGCATTGC
TTTGAAACCATATTTCAATGTCTTGAAGATTATGTTACAGGTGGGGAAAGAGAGGATGAG
GAACTTGTCACAAATGCCCTTGAGACTGTAGTGAATTTGGCTTTGTTGCTGAATCTTCGG
ATCTTTAGCTCCTCAAAACCTTCTTTTATCAAAATGACGGAGAAACGTGCAGTCAAGGCT
CTCATGGGAATGCTGGGATCTGCTGTGAAGGCTTGGCACTCTGGCGCTGCTGAATTAATT
GGTCGTCTTATAATAAATCCTGACAATGAACCTTTCCTACTTCCTTTTGCTTCACAGATA
TATACACGTTTGGTCGATATAATGAGCTCTCCACCAACTGATGCTCAAGCAGCTGCTGTA
GGTGCATTATATAACCTTGCAGAGATAAATATGGACTGCCGTTTAAAGCTGGCCAGTGAG
CGATGGTAA