Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g005230.3.1
CDS Infomation	Methyl-6-phytyl-1,4-benzoquinone methyltransferase 2 (AHRD V3.3 *** F1BPW0_SOLPN)
Sequence	ATGGCGTCTTCAATACTGAGTGGATCTGATAATTTCAAGCTTCTTAGTGGAATTTCTCCA TCTGGCTCATCATTTCTTGGGTCAGAACTGAATCTAAAGTGTTTACCCCAAAAGGGTTTT GTTAATTTGAGAGCAACAAGAACTCTAAGACCCACCAAATGCAGTTTGTCTGCTTCAAGG CCAGCTTCTCAACCAAGATTCATACAACACAAAAAAGAGGCATTTTGGTTCTACAGGTTC TTGTCTATTGTGTATGACCATGTCATAAATCCTGGGCATTGGACTGAAGATATGAGAGAT GAAGCACTTGAACCTGCTGAGCTACACGCAAGGAATTTGCAAGTGGTGGATGTTGGTGGT GGAACTGGATTTACTACTCTTGGGATTGTTAAGCATGTTGATGCTAAAAATGTGACTATT ATTGATCAATCACCTCATCAGCTTGCTAAGGCTAGGCAGAAGGAGCCATTGAAAGAGTGC AAGATACTTGAAGGAGATGCTGAGGATCTCCCATTTCCTACTGATACTTTTGATAGATAT ATTTCAGCTGGAAGCATTGAGTATTGGCCAGATCCACAGCGTGGTATCAAGGAAGCTTAT CGGGTACTAACCATAGGTGGGGTTGCCTGCCTGATTGGTCCGGTGTACCCAACATTTTGG TTATCTCGTTTCTTTGCAGATGTGTGGATGCTCTTTCCAAAAGAAGAAGAATATATAGAA TGGTTTAAGAAGGCCGGTTTCACACAAGTTAAGCTGAAGCGGATTGGCCCAAAATGGTAT CGTGGTGTCCGCCGACACGGGTTGATCATGGGCTGCTCTGTGACTGGAGTGAAGCCATAT GCTGGGGAATCACCATTGCAGCTCGGTCCCAAGGTTGAGGATGTGAGCAAGCCTGTGAAC CCTTTTGTATTTCTCATGCGATTCCTGCTTGGCATAATGGCTGCAAGTTACTACGTGCTC GTTCCAATATACATGTGGATTAAGGATCAAATCGTTCCGAAAGGTCAGCCCATCTGA

Peptide Sequence

PEP ID	Solyc03g005230.3.1
PEP Infomation	Methyl-6-phytyl-1,4-benzoquinone methyltransferase 2 (AHRD V3.3 *** F1BPW0_SOLPN)
Sequence	MASSILSGSDNFKLLSGISPSGSSFLGSELNLKCLPQKGFVNLRATRTLRPTKCSLSASR PASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPAELHARNLQVVDVGG GTGFTTLGIVKHVDAKNVTIIDQSPHQLAKARQKEPLKECKILEGDAEDLPFPTDTFDRY ISAGSIEYWPDPQRGIKEAYRVLTIGGVACLIGPVYPTFWLSRFFADVWMLFPKEEEYIE WFKKAGFTQVKLKRIGPKWYRGVRRHGLIMGCSVTGVKPYAGESPLQLGPKVEDVSKPVN PFVFLMRFLLGIMAASYYVLVPIYMWIKDQIVPKGQPI*

Transcript Sequence

Transcript ID	Solyc03g005230.3.1
Transcript Infomation	Methyl-6-phytyl-1,4-benzoquinone methyltransferase 2 (AHRD V3.3 *** F1BPW0_SOLPN)
Sequence	AGTGAAAAAAAAAAGGAGGATAAAACGGTGTCGTATAGCTCTGTGGTTCCTGTTTAGTTG CGAGTTGTAATCGTAATCTCAATATGTGGTAGCCAAAAAGGTAATGCTTCCATTTCTACT ACCTCACTGAACTTCTTGTGTTGTTTCTTCTTCAACTTTTTAAAAATTTCATTAAAATTG CAGAAAAACTTATCGAAATTGATGAATTTGAAGATATAGCATCTGGGTTTAGCTTCTTTT AGCTTGAAGTATTGTAAAAATTACATCTTCAAAGCTATAAAAATACTTTCATGGCGTCTT CAATACTGAGTGGATCTGATAATTTCAAGCTTCTTAGTGGAATTTCTCCATCTGGCTCAT CATTTCTTGGGTCAGAACTGAATCTAAAGTGTTTACCCCAAAAGGGTTTTGTTAATTTGA GAGCAACAAGAACTCTAAGACCCACCAAATGCAGTTTGTCTGCTTCAAGGCCAGCTTCTC AACCAAGATTCATACAACACAAAAAAGAGGCATTTTGGTTCTACAGGTTCTTGTCTATTG TGTATGACCATGTCATAAATCCTGGGCATTGGACTGAAGATATGAGAGATGAAGCACTTG AACCTGCTGAGCTACACGCAAGGAATTTGCAAGTGGTGGATGTTGGTGGTGGAACTGGAT TTACTACTCTTGGGATTGTTAAGCATGTTGATGCTAAAAATGTGACTATTATTGATCAAT CACCTCATCAGCTTGCTAAGGCTAGGCAGAAGGAGCCATTGAAAGAGTGCAAGATACTTG AAGGAGATGCTGAGGATCTCCCATTTCCTACTGATACTTTTGATAGATATATTTCAGCTG GAAGCATTGAGTATTGGCCAGATCCACAGCGTGGTATCAAGGAAGCTTATCGGGTACTAA CCATAGGTGGGGTTGCCTGCCTGATTGGTCCGGTGTACCCAACATTTTGGTTATCTCGTT TCTTTGCAGATGTGTGGATGCTCTTTCCAAAAGAAGAAGAATATATAGAATGGTTTAAGA AGGCCGGTTTCACACAAGTTAAGCTGAAGCGGATTGGCCCAAAATGGTATCGTGGTGTCC GCCGACACGGGTTGATCATGGGCTGCTCTGTGACTGGAGTGAAGCCATATGCTGGGGAAT CACCATTGCAGCTCGGTCCCAAGGTTGAGGATGTGAGCAAGCCTGTGAACCCTTTTGTAT TTCTCATGCGATTCCTGCTTGGCATAATGGCTGCAAGTTACTACGTGCTCGTTCCAATAT ACATGTGGATTAAGGATCAAATCGTTCCGAAAGGTCAGCCCATCTGAATAATAAGGACAA CTTATCAATCCAAGAGAAGTTCTCCACCAGTGACCACAACTCTGTTGTGGACCAACAATG TTTTTGGCATCATCGAACTTTAGTCTGTTAGTTTTTCAGCCCTAGCTTGTAAATTTTATT TTCATGGTAAAACCTAGAAAAATCTGTGACATTTTCTAGTTGGATAATCTATCAGTCATG TTTTCTAATCACACAACTCATTGAAATAAATAGTAGTAATGCATCGTTTGCCAATATTGA GCAAGTCTTGAGTATTTTAGTACTCGTGTGTCCTCATAGTTGATGTTCTTTTTTAATCCT TGAACAACTTCAGCATGTGCGAGTCAAGTCGCCCAAGGTTGTGGTGGAGTGG