Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g094400.3.1
CDS Infomation

Glycerophosphodiester phosphodiesterase, putative (AHRD V3.3 *** B9RH28_RICCO)
Sequence

ATGGCTCTTACAGCTGTTCATGTTTCCGATGTTCCCAATCTAGATCAAGTCCCTGACAAA
GCTCCTCTATATGCCACCCGATTCTCTCAAGGCATTGAAATTGGAAGAGCATCCGAATTT
TTAGTTGTTGGACACAGAGGGAACGGGATGAATTTGTTGCAATCGGCTGACCGGAGAATG
AATGCCCTCAAAGAAAATTCCATTCTTTCTTTCAATGCAGCTGCCAATTACCCAATCGAT
TTTATTGAATTTGACGTTCAGGTGACAAAGGATGATTGCCCTGTTATTTTTCACGACGAT
TTCATCCTCACTCAACATAATAATGGTACAGTTTATGAAAGGAGAATTACTGAATTGTCA
CTTGCTGAATTTCTTAGCTATGGACCCCAAAAAGAAGAGGGTCTCACTGGAAAACCTTTA
ATGAGGAAAACGAAAGATGGAAAGATTGTTAGCTGGACAGTTGAAACCGATGATTCCGCA
TGTACCTTAAAAGAAGCTTTTGAGAAAGTGAATCCATCTATTGGTTTCAACATCGAGCTC
AAATTTGATGATCACATTGTTTATCAACAGGACTACCTCATCCATGCTCTTAAAGCAGTG
TTACATGTCGTATTAGAGTATGCTAAAGGCAGACCAATCATATTCTCAAGTTTCCAGCCT
GATGCTGCTCTGCTTGTCAAGAAGCTCCAGACATGTTACCCTGTGTTTTTTCTCACAAAT
GGAGGTACAGAGATTTACTATGATGTTCGAAGAAACTCGTTGGAAGAGGCCACTAAACTG
TGCTTAGAGGGTGGTTTGGAAGGTATTGTTTCGGAGGTGAAAGGCATCTTCAGGAATCCA
GGAGTAGTTAACAAGATCAAAGAGTCCAAGCTGTCTCTGCTGACATACGGCAAATTGAAT
AATGTGCCTGAAGCTGTGTATATGCAACACCTGATGGGAATTGATGGAGTGATAGTGGAT
TTTGTTGAACAAGTAACAGATGCTGTGTGTAAGCTGGTGAAGAAGCCAGATGAGATATTG
CTGGAAGGGGAGGAAAAGGTTCAAAATAGACCTCAATTTTCACAGAGGGAATTGTCTTTT
CTGCTCAAACTTATCCCCGAACTGATACAACAATAA

Peptide Sequence

PEP ID

Solyc02g094400.3.1
PEP Infomation

Glycerophosphodiester phosphodiesterase, putative (AHRD V3.3 *** B9RH28_RICCO)
Sequence

MALTAVHVSDVPNLDQVPDKAPLYATRFSQGIEIGRASEFLVVGHRGNGMNLLQSADRRM
NALKENSILSFNAAANYPIDFIEFDVQVTKDDCPVIFHDDFILTQHNNGTVYERRITELS
LAEFLSYGPQKEEGLTGKPLMRKTKDGKIVSWTVETDDSACTLKEAFEKVNPSIGFNIEL
KFDDHIVYQQDYLIHALKAVLHVVLEYAKGRPIIFSSFQPDAALLVKKLQTCYPVFFLTN
GGTEIYYDVRRNSLEEATKLCLEGGLEGIVSEVKGIFRNPGVVNKIKESKLSLLTYGKLN
NVPEAVYMQHLMGIDGVIVDFVEQVTDAVCKLVKKPDEILLEGEEKVQNRPQFSQRELSF
LLKLIPELIQQ*

Transcript Sequence

Transcript ID

Solyc02g094400.3.1
Transcript Infomation

Glycerophosphodiester phosphodiesterase, putative (AHRD V3.3 *** B9RH28_RICCO)
Sequence

GTATCTACGCTAGGTTGGGGGGTCTAAAATTAATTTAATTAAGAAAAACATAATCTTTCC
AACTTTAAGCAAATTATGTAAATCAGATTGATGGAGAAAAAAATTACCAGTCATGATTTG
TCTTAAATAATCATTAATAAGTACATAAAAATAAAAGTAATACGACATCTAAAAATATTC
CAAGTTGCCATATTTTTTCTTATTACACTCTGTTGCACTTTTCATTTTACATGGCGCTCA
AAAAATTATAAATAAAAGAATAAAATTTTTAAATTTTTTTACAAATAAATATAAATATAT
TTCAAGAAATAATTGCAAAAGTAATATATGACAAATTCTATTATTTATTTTAATAAAATA
ATGGAGACAATTATTTTTTATAAGAATATGGAACGGAATTAATAAGAGTAGTGGATGGAT
CCAGCTAAGGTTTTTTTAATAAATAAAGGGAGAATAGTGGTCAGCAAAATTTTGCAATAA
ATAGATGTGTACAACTTCCAAAATACTCTTCGTTCAGAACGTTATCCATAACATGTCAGC
ATCTCGTGGCTACACATCATCTTCTTTTATTAATAATATATCACCTTGCCTATTGCAATA
TTAATTACAAATTATGTTTCTCATCATCAAATTTATATTCAAGGGAACACATGTTTCATA
CACCAATTTCAATTTATTAAAATCAGTTCATCAATCATGACTAATAGTTAATCTTTTTAC
CAAGTTGAAAACAAATTAAATATCATCTAGATAACTGCTTGTAATATGAGTGAATCATTG
CACGTTTTATATACCTACTACTCGCACAAATCTCGAAGGAAACCAATTAGCTGTAAGCTG
ACTATTACATTTTTTTTTATTTTTTTAAAAAAAAAGGAAAATCAAAATTTTTATTTTTAA
ACTTGTGTTAGTAATTGAAAAACTTACCACATGTAAGAAGAAAAAATCTTTTTAAAGTTG
ACCCAATAGTAAATTGTAAAAGAAAAAAAGTAAAAATTATGGTCTATAGATATCCTTTTC
AGAATAGCATCATGTGGTATATATTTAGCATATTCTTCCTTACAAATGCAATATCGAAAT
CAACTTTTAAAAAGTAACGACGATTAAGGGGAGCGAATATGGTTACTGAAGGGAAATTTC
GTACTTTTGCAAGTCGAATTATTGCAGCATGAAGTTAAATTTGAAAAAAAAAATATATAT
AATAAGAGAGTTGAGATTTTAGAAGGAATCTATAATGTGATGTATTAATTATTAATTAAA
ATAAAGGAGTAAAGAGGAGGACGCGTCTGATGTACGTGGGGAGGGAGAGAGGAATATCCA
AAAGCATAACACCGATTACGGATTGAGAATATTCCTGATCCCCTCTAACCTCCCATAAAT
ACCATTCTTTTCTTACTTGTTGTTGCATCCAATCCAATCCAATCATCCCGTTTTCTCTTC
TCTTCTCTTCTTCTCATATATATAATATATATACTAGTAGTATATATATATATAACAATA
CAACAACAATGGCTCTTACAGCTGTTCATGTTTCCGATGTTCCCAATCTAGATCAAGTCC
CTGACAAAGCTCCTCTATATGCCACCCGATTCTCTCAAGGCATTGAAATTGGAAGAGCAT
CCGAATTTTTAGTTGTTGGACACAGAGGGAACGGGATGAATTTGTTGCAATCGGCTGACC
GGAGAATGAATGCCCTCAAAGAAAATTCCATTCTTTCTTTCAATGCAGCTGCCAATTACC
CAATCGATTTTATTGAATTTGACGTTCAGGTGACAAAGGATGATTGCCCTGTTATTTTTC
ACGACGATTTCATCCTCACTCAACATAATAATGGTACAGTTTATGAAAGGAGAATTACTG
AATTGTCACTTGCTGAATTTCTTAGCTATGGACCCCAAAAAGAAGAGGGTCTCACTGGAA
AACCTTTAATGAGGAAAACGAAAGATGGAAAGATTGTTAGCTGGACAGTTGAAACCGATG
ATTCCGCATGTACCTTAAAAGAAGCTTTTGAGAAAGTGAATCCATCTATTGGTTTCAACA
TCGAGCTCAAATTTGATGATCACATTGTTTATCAACAGGACTACCTCATCCATGCTCTTA
AAGCAGTGTTACATGTCGTATTAGAGTATGCTAAAGGCAGACCAATCATATTCTCAAGTT
TCCAGCCTGATGCTGCTCTGCTTGTCAAGAAGCTCCAGACATGTTACCCTGTGTTTTTTC
TCACAAATGGAGGTACAGAGATTTACTATGATGTTCGAAGAAACTCGTTGGAAGAGGCCA
CTAAACTGTGCTTAGAGGGTGGTTTGGAAGGTATTGTTTCGGAGGTGAAAGGCATCTTCA
GGAATCCAGGAGTAGTTAACAAGATCAAAGAGTCCAAGCTGTCTCTGCTGACATACGGCA
AATTGAATAATGTGCCTGAAGCTGTGTATATGCAACACCTGATGGGAATTGATGGAGTGA
TAGTGGATTTTGTTGAACAAGTAACAGATGCTGTGTGTAAGCTGGTGAAGAAGCCAGATG
AGATATTGCTGGAAGGGGAGGAAAAGGTTCAAAATAGACCTCAATTTTCACAGAGGGAAT
TGTCTTTTCTGCTCAAACTTATCCCCGAACTGATACAACAATAACAATTCATAAAATGAT
TGTAGATAGCAAAGCGTGTAGAAATGTAGATTTTCATTGTATTTGCACCCTCTCTGTAAT
CATATCAAAATATTTTATGAATTGTCTTGGAATTTTAGCAACATCAACTCACTTCAATTA
GGTTGGTTATTAAACAGTCCAACCCACATTAGTTACCAAATGTACCTGTGGCTGTGAATC
ATAGTTAAAATTGACATGACCTTTCGAGAGAAAGCAAAGCAAGTAACGTATTAATCTCAA
GTAGAGGGGATTCATTTATGACAGTGAATATTAATTAAACAAT