Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g093980.3.1
CDS Infomation	nucleolar protein gar2-like protein (AHRD V3.3 - AT2G42320.2)
Sequence	ATGGTTTCGGGACTGAGGGCGAAAACTAGGAAAGGTCCCTCAGTTCAAGTAGATTATCTA ATTCATATTCAGGAGATCAAACCTTGGCCTCCCTCGCAGTCATTGAAGTCGGTTCGTGCT ATTGTGATCCAATGGGAAAATGGAGATAGGAATGGTTCTACTAGTCAAGTTGTCCCATTT TTAGGCTCTGGTGTTGGTGATGGAAGAATTGAGTTCAATGAGTCCTTTAAACTACCTGTG ACACTACTGAAGGAAATTTCTAATAAAGGGGGTGATGGAAACAGTTTTCAAAAAAATTGC ATGGAGTTCAACTTGTATGAACCCCGACGTGACAAGACAGTCAAAGGTCAACCCTTAGGA ACTGCTGTTATCAATTTGGCTGAATATGCTGTTATCAAGGAGGGTTTGAATGTAAGTGCC CCTATTAATTGCACAAGGGCTTATAGGAACACTACACAGGCCCTTCTCTTCCTGAAAATC CAGCCATTTGAGAAAGGTCGCGTCAGCTCCTCATCTTCAAGTCACATTTTAACGAGGGAA GTGTCAATAGACCGTAATGGTGTTGAATCTCTGTCTACATTGACAAGTGAAGAATGTGCT GAGGAAGCTGAGACTGCCTCATTTACCGATGATGATGGTTCCTCGCACTCATCAGTTGCT GTTTCTTCTTCAGCTAATGGATCGAACTGTGGTTCACTACCACAAGGAGAGGATGAAGCT GAGGGAGTGAAAAGTAATCCTGGACAACATGAAGATGAACATCTCCTACATTCAAAGAAA AAATCTGTAGATTTGGATGAGAAGCAAGTGGTGAAATCATTATCTGATTTGAAGGGAAGT CCATCTCCCTCTTCAACTGATTTGTCTTCTGACTTGGCATGGCTCTCAAGGAAAATAGGT GGTAGTGGTAGCAATAAATTCTCAACCTCAAGTGAGAATGAAATAACTGAAAACTCTCAG AATCCGCGGGTGATGACCAAACATGTTGAACCAGAAAGAATACTGGCTAACAGTGAAAGT GATGGTGAAATATATACTCCTCAAAAATCTGATGAAGGGAGGGTCAATAGTCATCCAGAT CAAGAAGGCTTTCCAATTTCACATATCACAGATGAGAGTAAATGCTTTATGAACTCAGCA AGTCATTTCTCCAGTTCTGAGAATGCTGATAATGCTTCTACTCCTATTGCGGATAGGCAT GAGGATGTGATAGATATTGTTACCAAAAATGGTTCTTATGAGGGTGAAAACAGTGAGAAT TATCAAGAGAGGAGGCAAGAATCTGGTGTCTATAATATAGAGAATTATCAGGAAAATGGA AAAGTACAAGAAATTGTCGAAGAGGAAGACAGTGAGGATTCTATGAAGAATGACTCAGAA AAAAGTGACGTAAATTCTACTGACTCTGAGAATGCTTTCACTCCTCTTGGAAATAGGCAT GAAGATGCGAGAGCTGTTGTTACCAAGAATGGTTCTTGTGAGGGTCAAAACAGTGAGAAT TATCAAGAGAGGGAGAACTATCAGGAAAATGAACAAGTACAAGAAATAGTCGAAGAGGAA GAAAGTGAGGATGCTATGAAGAATGTCTCAGAAGAAAGTGATGTAAATTCTACTGACACG GACAGTTATGGAGCAAAGAGTAGTATCCTGAATAATGAGAGATTAAAGCATGTAAAGTCA GTTAGGTCATCAGCAGAACCTAATAGAGTAAGAGGGTCTGTCAGGGGCAATCAACTTTTA GCACAAGATAAATTGATTAGTACTCAAGATTTAGGAAATGAGTGGAAAAATCGAAATGCG CATTCAACAATTCTTTTGGAAAACAAACTCCATAAGTTGGAGCAAAGAGTAAAGATGGCA GAAGGAGAATTGAGAGAAGCTGCTGCAATTGAAGTTGGCCTCTATTCGGTTGTTGCAGAG CATGGGAGTTCCACAAATAAGGTACATGCTCCTGCAAGACGTCTGTCGAGGTTCTATTTC CATGCCTGTAAAGATGACTCTCTATTGAAAAGGGGATCTGCTGCTAAAAGTGCTGTCTCT GGATTAATTTTGGTTGCAAGAGCATGTGGAAATGATGTTCCAAGGTTAACTTTCTGGTTA TCAAATTCGGTGGTGCTGAGAGCAACTATAAGCAAATTCCAGCGGCAGCTGTGTTTGCCC CGTACTACTGAAACTATTCTTGGAGAGGCTGTTTCCAAGGACAAGAAGAAGATATCTTCT CCACTTAAGTGGGAGACTTTTTCCAGCAATGTTACAAAGGATGATTTTTGTGAAAGTTTT GGTAATTGGGAGGACCCTCGTACATTTACGAGAGCACTTCAGAGAACAGAGGCCTGGATA TTCTCCCTTATCGTTGAATCTATTTGGTGGCAGACTCTCACTCCACATATGCAATCTGGT GCTGCAAAAGAAATCCGCGAAAGTATGAATTCTTTGATAAGCAAAGTTTATAGAAGGACA GCAACTTCAGATAATGAAGAGCATGGAAGTTATTCTTCAGAGCTTTGGAAGAAAGCCTTC AAGGATGCATGTGAAAGAATTTGCCCTGTTAGAGCTGGAGGGCACGAGTGTGGTTGTTTG CGTTTTCTATCTAAACTGATAATGGAACAATGTGTGGCTAGACTGGATGTAGCTATGTTC AATGCAATCCTTCGAGAGTCTGCTGATGAGATTCCTTCAGATCCTATATCAGACCCCATT AGTGATGCCGATGTTCTTCCTATTCCAGCTGGACAGGCTAGTTTTGGGGCGGGGGCACAA CTGAAAAATACGGTTGGGAATTGGTCCAGATGGCTTACTGACCTTTTCGACATTGATGAT GGGGAATCACTAAAAAATAGTAATGAAGAGAATGGGAGTAAAGAACTTGACACCTCTGCA AAGTCTTTCTACCTTCTAAATGCATTGAGTGATCTTATGATGCTTCCAAAGGATATGCTT TTAAGCAGGACAATGAGAAAAGAGGTATGTCCGGCACTTGGTCCTTTGCTAATAAGAAGG GTTCTTAATATATTTGTTCCAGATGAGTTTTGTTGTGATTCAATACCTGAAGCGGTATTT GAAGTTCTCTCAGAGGAACCTTCTGAGGCTGAGGGTGATTCTGTTACAAACTATCCGTGC ACAGCAGCTCCTGTGGCTTATATGCCACCTCCAATAGCTTCAGTAGCTGGTATGTTGGGC GATGGGTATAGCTATTCTATGTTGACACGAAGTGCATCTTCAGTGCTCAAAAAGTCATAC ACAAGTGATGAGGAACTTGAGCTATTGGATTCACCGTTGAATTTTATCATTAGTGATGGC ACTGAAGCTTCACATTCTTTAGTAAAACAGAGTTCCATGCCAAAAAATAGTGGAAGGCAG AGGTACCAACTCCTTCGGGAGGTTTGGATTAACAGTGAGTAA

Peptide Sequence

PEP ID	Solyc02g093980.3.1
PEP Infomation	nucleolar protein gar2-like protein (AHRD V3.3 - AT2G42320.2)
Sequence	MVSGLRAKTRKGPSVQVDYLIHIQEIKPWPPSQSLKSVRAIVIQWENGDRNGSTSQVVPF LGSGVGDGRIEFNESFKLPVTLLKEISNKGGDGNSFQKNCMEFNLYEPRRDKTVKGQPLG TAVINLAEYAVIKEGLNVSAPINCTRAYRNTTQALLFLKIQPFEKGRVSSSSSSHILTRE VSIDRNGVESLSTLTSEECAEEAETASFTDDDGSSHSSVAVSSSANGSNCGSLPQGEDEA EGVKSNPGQHEDEHLLHSKKKSVDLDEKQVVKSLSDLKGSPSPSSTDLSSDLAWLSRKIG GSGSNKFSTSSENEITENSQNPRVMTKHVEPERILANSESDGEIYTPQKSDEGRVNSHPD QEGFPISHITDESKCFMNSASHFSSSENADNASTPIADRHEDVIDIVTKNGSYEGENSEN YQERRQESGVYNIENYQENGKVQEIVEEEDSEDSMKNDSEKSDVNSTDSENAFTPLGNRH EDARAVVTKNGSCEGQNSENYQERENYQENEQVQEIVEEEESEDAMKNVSEESDVNSTDT DSYGAKSSILNNERLKHVKSVRSSAEPNRVRGSVRGNQLLAQDKLISTQDLGNEWKNRNA HSTILLENKLHKLEQRVKMAEGELREAAAIEVGLYSVVAEHGSSTNKVHAPARRLSRFYF HACKDDSLLKRGSAAKSAVSGLILVARACGNDVPRLTFWLSNSVVLRATISKFQRQLCLP RTTETILGEAVSKDKKKISSPLKWETFSSNVTKDDFCESFGNWEDPRTFTRALQRTEAWI FSLIVESIWWQTLTPHMQSGAAKEIRESMNSLISKVYRRTATSDNEEHGSYSSELWKKAF KDACERICPVRAGGHECGCLRFLSKLIMEQCVARLDVAMFNAILRESADEIPSDPISDPI SDADVLPIPAGQASFGAGAQLKNTVGNWSRWLTDLFDIDDGESLKNSNEENGSKELDTSA KSFYLLNALSDLMMLPKDMLLSRTMRKEVCPALGPLLIRRVLNIFVPDEFCCDSIPEAVF EVLSEEPSEAEGDSVTNYPCTAAPVAYMPPPIASVAGMLGDGYSYSMLTRSASSVLKKSY TSDEELELLDSPLNFIISDGTEASHSLVKQSSMPKNSGRQRYQLLREVWINSE*

Transcript Sequence

Transcript ID	Solyc02g093980.3.1
Transcript Infomation	nucleolar protein gar2-like protein (AHRD V3.3 - AT2G42320.2)
Sequence	TTAAGAGGCAATTTCATTTTAGCTTTGATTACATGTTGGTTTGTATTGCACCTTCATAAT TGCGAGTAGAATCTTTTGGACAGCCGGAAAGCACCATTGATTTTGAAGCATCAGCCTCCA CCACTCGACGTTTGTATTTTCCATGCTCATTTCTTTATTTACCAATTGGAATAAAACATT CTTCTCACACTTCCTCTAGGCTGTGTGTCGGCAACCACTGCAATGTTCTACTCTCCTCCT AACCATTGCAGGCTTTGTTAGAATTCCATTTTACATTTGTGTATCGGAAATCATGGTTTC GGGACTGAGGGCGAAAACTAGGAAAGGTCCCTCAGTTCAAGTAGATTATCTAATTCATAT TCAGGAGATCAAACCTTGGCCTCCCTCGCAGTCATTGAAGTCGGTTCGTGCTATTGTGAT CCAATGGGAAAATGGAGATAGGAATGGTTCTACTAGTCAAGTTGTCCCATTTTTAGGCTC TGGTGTTGGTGATGGAAGAATTGAGTTCAATGAGTCCTTTAAACTACCTGTGACACTACT GAAGGAAATTTCTAATAAAGGGGGTGATGGAAACAGTTTTCAAAAAAATTGCATGGAGTT CAACTTGTATGAACCCCGACGTGACAAGACAGTCAAAGGTCAACCCTTAGGAACTGCTGT TATCAATTTGGCTGAATATGCTGTTATCAAGGAGGGTTTGAATGTAAGTGCCCCTATTAA TTGCACAAGGGCTTATAGGAACACTACACAGGCCCTTCTCTTCCTGAAAATCCAGCCATT TGAGAAAGGTCGCGTCAGCTCCTCATCTTCAAGTCACATTTTAACGAGGGAAGTGTCAAT AGACCGTAATGGTGTTGAATCTCTGTCTACATTGACAAGTGAAGAATGTGCTGAGGAAGC TGAGACTGCCTCATTTACCGATGATGATGGTTCCTCGCACTCATCAGTTGCTGTTTCTTC TTCAGCTAATGGATCGAACTGTGGTTCACTACCACAAGGAGAGGATGAAGCTGAGGGAGT GAAAAGTAATCCTGGACAACATGAAGATGAACATCTCCTACATTCAAAGAAAAAATCTGT AGATTTGGATGAGAAGCAAGTGGTGAAATCATTATCTGATTTGAAGGGAAGTCCATCTCC CTCTTCAACTGATTTGTCTTCTGACTTGGCATGGCTCTCAAGGAAAATAGGTGGTAGTGG TAGCAATAAATTCTCAACCTCAAGTGAGAATGAAATAACTGAAAACTCTCAGAATCCGCG GGTGATGACCAAACATGTTGAACCAGAAAGAATACTGGCTAACAGTGAAAGTGATGGTGA AATATATACTCCTCAAAAATCTGATGAAGGGAGGGTCAATAGTCATCCAGATCAAGAAGG CTTTCCAATTTCACATATCACAGATGAGAGTAAATGCTTTATGAACTCAGCAAGTCATTT CTCCAGTTCTGAGAATGCTGATAATGCTTCTACTCCTATTGCGGATAGGCATGAGGATGT GATAGATATTGTTACCAAAAATGGTTCTTATGAGGGTGAAAACAGTGAGAATTATCAAGA GAGGAGGCAAGAATCTGGTGTCTATAATATAGAGAATTATCAGGAAAATGGAAAAGTACA AGAAATTGTCGAAGAGGAAGACAGTGAGGATTCTATGAAGAATGACTCAGAAAAAAGTGA CGTAAATTCTACTGACTCTGAGAATGCTTTCACTCCTCTTGGAAATAGGCATGAAGATGC GAGAGCTGTTGTTACCAAGAATGGTTCTTGTGAGGGTCAAAACAGTGAGAATTATCAAGA GAGGGAGAACTATCAGGAAAATGAACAAGTACAAGAAATAGTCGAAGAGGAAGAAAGTGA GGATGCTATGAAGAATGTCTCAGAAGAAAGTGATGTAAATTCTACTGACACGGACAGTTA TGGAGCAAAGAGTAGTATCCTGAATAATGAGAGATTAAAGCATGTAAAGTCAGTTAGGTC ATCAGCAGAACCTAATAGAGTAAGAGGGTCTGTCAGGGGCAATCAACTTTTAGCACAAGA TAAATTGATTAGTACTCAAGATTTAGGAAATGAGTGGAAAAATCGAAATGCGCATTCAAC AATTCTTTTGGAAAACAAACTCCATAAGTTGGAGCAAAGAGTAAAGATGGCAGAAGGAGA ATTGAGAGAAGCTGCTGCAATTGAAGTTGGCCTCTATTCGGTTGTTGCAGAGCATGGGAG TTCCACAAATAAGGTACATGCTCCTGCAAGACGTCTGTCGAGGTTCTATTTCCATGCCTG TAAAGATGACTCTCTATTGAAAAGGGGATCTGCTGCTAAAAGTGCTGTCTCTGGATTAAT TTTGGTTGCAAGAGCATGTGGAAATGATGTTCCAAGGTTAACTTTCTGGTTATCAAATTC GGTGGTGCTGAGAGCAACTATAAGCAAATTCCAGCGGCAGCTGTGTTTGCCCCGTACTAC TGAAACTATTCTTGGAGAGGCTGTTTCCAAGGACAAGAAGAAGATATCTTCTCCACTTAA GTGGGAGACTTTTTCCAGCAATGTTACAAAGGATGATTTTTGTGAAAGTTTTGGTAATTG GGAGGACCCTCGTACATTTACGAGAGCACTTCAGAGAACAGAGGCCTGGATATTCTCCCT TATCGTTGAATCTATTTGGTGGCAGACTCTCACTCCACATATGCAATCTGGTGCTGCAAA AGAAATCCGCGAAAGTATGAATTCTTTGATAAGCAAAGTTTATAGAAGGACAGCAACTTC AGATAATGAAGAGCATGGAAGTTATTCTTCAGAGCTTTGGAAGAAAGCCTTCAAGGATGC ATGTGAAAGAATTTGCCCTGTTAGAGCTGGAGGGCACGAGTGTGGTTGTTTGCGTTTTCT ATCTAAACTGATAATGGAACAATGTGTGGCTAGACTGGATGTAGCTATGTTCAATGCAAT CCTTCGAGAGTCTGCTGATGAGATTCCTTCAGATCCTATATCAGACCCCATTAGTGATGC CGATGTTCTTCCTATTCCAGCTGGACAGGCTAGTTTTGGGGCGGGGGCACAACTGAAAAA TACGGTTGGGAATTGGTCCAGATGGCTTACTGACCTTTTCGACATTGATGATGGGGAATC ACTAAAAAATAGTAATGAAGAGAATGGGAGTAAAGAACTTGACACCTCTGCAAAGTCTTT CTACCTTCTAAATGCATTGAGTGATCTTATGATGCTTCCAAAGGATATGCTTTTAAGCAG GACAATGAGAAAAGAGGTATGTCCGGCACTTGGTCCTTTGCTAATAAGAAGGGTTCTTAA TATATTTGTTCCAGATGAGTTTTGTTGTGATTCAATACCTGAAGCGGTATTTGAAGTTCT CTCAGAGGAACCTTCTGAGGCTGAGGGTGATTCTGTTACAAACTATCCGTGCACAGCAGC TCCTGTGGCTTATATGCCACCTCCAATAGCTTCAGTAGCTGGTATGTTGGGCGATGGGTA TAGCTATTCTATGTTGACACGAAGTGCATCTTCAGTGCTCAAAAAGTCATACACAAGTGA TGAGGAACTTGAGCTATTGGATTCACCGTTGAATTTTATCATTAGTGATGGCACTGAAGC TTCACATTCTTTAGTAAAACAGAGTTCCATGCCAAAAAATAGTGGAAGGCAGAGGTACCA ACTCCTTCGGGAGGTTTGGATTAACAGTGAGTAAAATGAGTAGTTGTGGTGTTAACAGAT TTCTTGGTTTTCATCTAAAGGAAGATAGGGATCGATGATGAGAGTATGATTTGTGGATAT GAGAAGCACTTGTTATGCATCTTCACGTGTAGATATTGTAGGAGTTAGGTGTCTGTAGAA ATATTTGATAAACTTGAATGGGAAAAGGTGTTGTTCTTTTTGTGATTGAGTTATTGCAGT TGTTCTACTGCTTCATAATGTATAGTAGTTTCCATAGTTACTTCACCAGTATAAACTCAA ACTACAAAGTTAACACACGAAACCACACTCAATAGTTATATAGATGGAACATTTTACAAA CTGTGTTCTGCTAGAGATAACATGGTTACACTCGTAAACAAGAATGAAACAAAAACTAGC TATACATTGCCGGTCAAAACTGATATTGATACACTCATATCACTGCACATAATATACTTG CAAAAAGAATTAAGTAACACAGGAGAATCGTATCAGCATCCTGCAGTCAACTGTGTTGAA CCAACTGCACTCATCATGTGCTGAAGTTGCAATGCAGCCAAAAGGCCTTGCCAAGTTTCA GCAGGCCCTCCTGCTACTTGATAATTGAGGAGCTTTTTCTGCTTCCTATAATATTCTTCT AAGGGTTTGATCTTCAAAATAATATACAGAACAATAACATGTATTAGTTGCCTTTGTAGT TCAACTGAGAAAACAATGAGTAATGATTCTGCATCAAGATGGTGACAATCATACTAAGAT ATATAAAGCTCATCATCTGTGAAGCACATGCAGAGAGTAAATGTGAAAGCATATTGAATT GAGTGGTTTGAGATATATCTTTTGACATTGTGATATAAACTCTTCAGCATGATTAGTCCA ACTATGGATGATCATGAACGCTTTTAATTTTTGTGACAAATCTTTTGTTCATATATTTAC AGTAACAGAACTGCTAGGCAATCTCAAATGTTTTCTTGGCTACTGTTATTGTTAACTTGT AAAATTTACAATATGTCAGACAGATACCTGTTCATCATGATCATATTGCTTCTCTTTCCA GGCACCACCATCCATGACCCTTGAAGACATTAAATTACCTCTCTTAAGGAGTTGATCTTC AGTTGAATAAATTCCATTGCTTCTATCATTCTTTGACACGGAACACTTGAGATTCAGAAC TAAATCTATGTCCACAACTTTGTCAAGGATTTCCTACATAAAGATATATCAGAAAAACCG ACTCAATTTTTCATGAGAAAAATGAAGAGCCCTTCCTTAAGTGAGGAGGGAGAGGTATAC ATACAGCCTGAAGCATTGTACGAGGAATTCCATCTAAAATGAACCCGTTTTCACCTCTGC AATGACCTTCTTCTAGCCTCTTTGATAACAAACCAAAAATAACTTCTTCTGGAACATGCT TTCCCTCATTCACAACACTTGATATCTTCATACAACCATAAATTATTTCAATAAAAGCAT ATTGGTCATATTGTTAAAAGATAAATAAATACCTTGTTATAGTGAGGGTTGAGTTGTTGA GGTACGAGAGAGCCCATGGAAATATATGGAACGTCCATAAGTTTGGACAGCCATTGGGCG TACACGTGTCTCTGCGTCATTGGATGACCCATGATCAGCCACTGTACTCCTCTGCGTGGA ACTGATCCTGATGGTTCCTCCATATCCTCCTCATTGTCGTAATCAAAGTGAGCTGCAACA GCTGAACCGTAGGCCCGAACCGACTTGCTTGAAGCAGCCCGAAGAAATGTTCGGGCGGAA ACTCCGAGGAAGCTCAACATTGCCATGGCGTGTGGGAGGTGTAAATGGTGGTTGTTTATA AAATGGGAATGATGCTGAAAATGTGTAGGATTTAGGTGGATGGCATGAATCAAAGGAGTT GACCAACAAATGTTTTCACTAGACTCGGTCTTACGACTCCCATTATCTTTCACCTATCAA ATTACTCGCTTAACAAAATGGATTTTATGACATATTGAAAGAAAGAAAAAAAAACACATT TTCTAATCTTAACTTATAATTACAATTCTTTAAAATTTAAAGTTAAAATCAATAAACAAA TTCAAATTGAAAAATAATCATATAAATAAATTGATGGTGGGCGTGGGGCATGTGCATTGT AAATGACATGTGGACCTCCTGGAATATTATTGTGTTTAAATTGATCATTTTATAAAATTA AAGAAAAGTGAAAGCAGAAAAAATCAATCAAAATCGCCCACCGTCCTCCTGGAATATTAT TGTGTTTAAATTGATAAAGGGAAGTAAAAAAAACAGAA