Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093940.3.1
CDS Infomation

Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT4G14605.2)
Sequence

ATGACATCTTTTATGCAACTACGAATCCCAAACGCAAAGCTTGCCTTTTTTTCAAGAACA
TCACGAGTACCCCTTTATCGGATTGTATTGTCGTTCCCTCAGAAGGTTTTCTTTTGCACA
GCTAAGTATTCTGAATCTGAGGTAGACGGATCTTTTAGCTTAAGGTTGGTCCCCCCAACC
CTTGTAGCTGCTGAAAAGGAAGAGGCGAAGGCTGTCTTGACCTTGTTTCTGAAGAAACAG
GGTTTAAGCAATGCTCTTGCAGCAAGAGCTATCAACAGATCAGAGTCTTTTATCGAACAC
CTTGTCTCTCGGCTGCATTCTGTTCATAAGTCTCGCTACCTCGTAGGACGAGAACTAACA
ACTCTTGAGATTAGGGATGCTCTCATCCCATACCTTGAGGCCCTCCACGAGGAATATGGA
AGCATTTTGGTGGACGTTGTGGAGAGCTTTCCAAACCCACCAGTTGTGGAGAAAATAGAA
GAAACTGTTGAAAAAGTACCTATTCCTGTCACACCAGCTTCACCTCCTAGTGCTGTTCTC
GACTCCAAGAAACTGAAGGCTCTGGCACGAGTGACTGATATTGGACCCACTGGAAAGCTT
CCCCCACATATTTTATACCTTGTTGAACTGGGCATGGACATTGAAAGGATTAGAGTAATC
ACACGAAAGTTTCCTGCTTTTGCTTACTATAGTCTTGAGGGAAAAATCAAACCAGTAGTT
GAGTTCCTCCTTGATCTTGGAGTGCCAAGATCACAGATCCCAACAATTCTCAGCAAAAGG
CCTCAACTATGTGGAATTAGTCTCTCAGATAATTTAATTCCAACAATGACATTTTTGGAA
GAACTGGGCGTTGATAAAGAACAATGGGCTAAAGTAATCTACCGTTTTCCTGCACTTCTC
ACTTACAGTAGACCTAAATTGAAAGCAACAGTGGACTTTCTTTATGAAATGGGTCTATCT
GCTGAGTGTGTGAGCAAGGTTCTAACCAGATGTCCAAACATCATAAGTTATAGCGTGGAG
GACAAGCTAAGGCCTGCAACTGAGTACTTCCGGTCAATGGGGGTTGATGTTGGAGTTCTT
CTCTACCGATGTCCTCAAACCTTTGGTCTTAGCATTGAGGCTAACATTAAGCCTGCCACC
GAGTTCTTCAAGGATAAGGGGTTCAGTATGACGGAAATTGCCACAATGGTGTCAAGATAC
GGTGCTCTATATACTTTTAGCTTCGCTAAGTTGGTATTAAAGTGGGAGTTCTTTTTGACC
ATGGGTTATCCAAGAACAGAACTGGTCAAGTTTCCTCAGTATTTTGGTTATAGTTTAGAA
GAGAGAATCAAGCCAAGGCTTGCCATTATGACTGATAAAGGTGTAAGGTTGTTACTTAAC
CAGATGTTGTCACTGTCAGAAGATGCTTTCAATAAGGCTTTGGAAAAAAAATTGCAGAAA
CTAATAGATAGTTAG

Peptide Sequence

PEP ID

Solyc02g093940.3.1
PEP Infomation

Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT4G14605.2)
Sequence

MTSFMQLRIPNAKLAFFSRTSRVPLYRIVLSFPQKVFFCTAKYSESEVDGSFSLRLVPPT
LVAAEKEEAKAVLTLFLKKQGLSNALAARAINRSESFIEHLVSRLHSVHKSRYLVGRELT
TLEIRDALIPYLEALHEEYGSILVDVVESFPNPPVVEKIEETVEKVPIPVTPASPPSAVL
DSKKLKALARVTDIGPTGKLPPHILYLVELGMDIERIRVITRKFPAFAYYSLEGKIKPVV
EFLLDLGVPRSQIPTILSKRPQLCGISLSDNLIPTMTFLEELGVDKEQWAKVIYRFPALL
TYSRPKLKATVDFLYEMGLSAECVSKVLTRCPNIISYSVEDKLRPATEYFRSMGVDVGVL
LYRCPQTFGLSIEANIKPATEFFKDKGFSMTEIATMVSRYGALYTFSFAKLVLKWEFFLT
MGYPRTELVKFPQYFGYSLEERIKPRLAIMTDKGVRLLLNQMLSLSEDAFNKALEKKLQK
LIDS*

Transcript Sequence

Transcript ID

Solyc02g093940.3.1
Transcript Infomation

Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT4G14605.2)
Sequence

TGTTTGGCACTAGAGAACAAACCACATCTGCGGTCCAAAAGCCTCCTCCCCAAAAATCTT
CAAATACACCCAATTTCCAACTCCGTTTTTTACTTCACCTTCTTTGTTTAATCAATGCTT
CACACTAGTTTTCATAGTAACAACACCACTGAGCAGCTGAAAAATGACATCTTTTATGCA
ACTACGAATCCCAAACGCAAAGCTTGCCTTTTTTTCAAGAACATCACGAGTACCCCTTTA
TCGGATTGTATTGTCGTTCCCTCAGAAGGTTTTCTTTTGCACAGCTAAGTATTCTGAATC
TGAGGTAGACGGATCTTTTAGCTTAAGGTTGGTCCCCCCAACCCTTGTAGCTGCTGAAAA
GGAAGAGGCGAAGGCTGTCTTGACCTTGTTTCTGAAGAAACAGGGTTTAAGCAATGCTCT
TGCAGCAAGAGCTATCAACAGATCAGAGTCTTTTATCGAACACCTTGTCTCTCGGCTGCA
TTCTGTTCATAAGTCTCGCTACCTCGTAGGACGAGAACTAACAACTCTTGAGATTAGGGA
TGCTCTCATCCCATACCTTGAGGCCCTCCACGAGGAATATGGAAGCATTTTGGTGGACGT
TGTGGAGAGCTTTCCAAACCCACCAGTTGTGGAGAAAATAGAAGAAACTGTTGAAAAAGT
ACCTATTCCTGTCACACCAGCTTCACCTCCTAGTGCTGTTCTCGACTCCAAGAAACTGAA
GGCTCTGGCACGAGTGACTGATATTGGACCCACTGGAAAGCTTCCCCCACATATTTTATA
CCTTGTTGAACTGGGCATGGACATTGAAAGGATTAGAGTAATCACACGAAAGTTTCCTGC
TTTTGCTTACTATAGTCTTGAGGGAAAAATCAAACCAGTAGTTGAGTTCCTCCTTGATCT
TGGAGTGCCAAGATCACAGATCCCAACAATTCTCAGCAAAAGGCCTCAACTATGTGGAAT
TAGTCTCTCAGATAATTTAATTCCAACAATGACATTTTTGGAAGAACTGGGCGTTGATAA
AGAACAATGGGCTAAAGTAATCTACCGTTTTCCTGCACTTCTCACTTACAGTAGACCTAA
ATTGAAAGCAACAGTGGACTTTCTTTATGAAATGGGTCTATCTGCTGAGTGTGTGAGCAA
GGTTCTAACCAGATGTCCAAACATCATAAGTTATAGCGTGGAGGACAAGCTAAGGCCTGC
AACTGAGTACTTCCGGTCAATGGGGGTTGATGTTGGAGTTCTTCTCTACCGATGTCCTCA
AACCTTTGGTCTTAGCATTGAGGCTAACATTAAGCCTGCCACCGAGTTCTTCAAGGATAA
GGGGTTCAGTATGACGGAAATTGCCACAATGGTGTCAAGATACGGTGCTCTATATACTTT
TAGCTTCGCTAAGTTGGTATTAAAGTGGGAGTTCTTTTTGACCATGGGTTATCCAAGAAC
AGAACTGGTCAAGTTTCCTCAGTATTTTGGTTATAGTTTAGAAGAGAGAATCAAGCCAAG
GCTTGCCATTATGACTGATAAAGGTGTAAGGTTGTTACTTAACCAGATGTTGTCACTGTC
AGAAGATGCTTTCAATAAGGCTTTGGAAAAAAAATTGCAGAAACTAATAGATAGTTAGCC
ACAGGCAACGTCTCTGATGGAAGTCACCAGCCAATAAAGGGATATGTGGAGATTTTAGCA
TTTAGATTTCAAAGTCCGTTGAGCCAAAAGTTATGGTTTTGAGTTATTGCTAGGTGAAGA
TAGCAGTGTTCCTATTAATGTTTTTTTTACAAAGTTGTCTCAATGGATGCTAGGGAAATT
TGCTTCCTCTCCTCTTGAGGAATCTTATTGAGTCAGTAGACATCTCCTGTACCTGGTGTA
CAACTGTACAGACAAAACTAATCGGTAGAATAGCTTTTAGGCAATGCATTTTATGTGTAT
TTTGTACTGGAGGTTTGTTGTGTTGATAGGCCTTTAGAATATGATCTTTAACAAGTGATT
TCTCAATTCTTGGGAGATCAACACTATTTGTGAGGACACACACACATATATATATATATA
TATGGCTTTCAACAGGA