Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g093800.3.1
CDS Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9HTC9_POPTR)
Sequence

ATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGC
GATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTG
TCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACT
CTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGT
GCAGCAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAA
CAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCA
ACAAAGCACTTGAAAGAAAAAGACATCAAGCGGCAGACATTAATAGAGCTTGTTGATTAT
CTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTG
TCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCT
TTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTG
TATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGA
TATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGA
GAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGC
CCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAG
CATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTT
CCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCA
AAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAG
GATTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAAC
AGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCT
CCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGC
TCGCACTTTCAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATCATGTTGAGAAC
CTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCTTCCCTTCCTTGGAGAAGAAT
GCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTC
TCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCC
CAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCT
GGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCA
CCATCTGGCTAG

Peptide Sequence

PEP ID

Solyc02g093800.3.1
PEP Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9HTC9_POPTR)
Sequence

MIKQILNRLPRKPSKSAENRDGGSSASPSNASTGSRSSDLSTAQSGNSSATTVSGVTSST
LGPNHGNRLPQGANAKVNGSAAVFLCETLPSFKDVPTAEKQNLFIKKLNLCCVLFDFTDP
TKHLKEKDIKRQTLIELVDYLSSANGKFTETVIQEIVKMVSSNLFRSLTPQPRENKVLEA
FDLEDDEPLMDPAWPHLQIVYEFFLRFVASPETDAKLSKRYVDHSFVLRLLDLFDSEDPR
EREFLKTVLHRIYGKFMVHRPFIRKSINNIFYRFIFETEKHNGIAELLEILGSIINGFAL
PLKEEHKLFLVRALIPLHKPKCVHMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITN
SSKEVVFLGELEEVLEATQPPEFQRCMVPLFHQISRCLSSSHFQVAERALFLWNNDHVEN
LIKQNHRVILPIIFPSLEKNARGHWNQAVQNLTLNVRKIFSDIDSELFEECLQKFEEDEA
QEEEVKRKREITWKRLEELAGVKAASNEPVLVSHKITPHPPSG*

Transcript Sequence

Transcript ID

Solyc02g093800.3.1
Transcript Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9HTC9_POPTR)
Sequence

AATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTT
GTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCG
ATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGGATGT
TATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAAC
AGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCC
CGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGATGAAAAAGAGTTTTACTGGTCTA
GACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGG
GGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGAT
TGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCAT
ATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAG
CAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAA
GCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCA
CTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGG
TGAATGGAAGTGCAGCAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAA
CTGCTGAGAAACAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACT
TTACTGACCCAACAAAGCACTTGAAAGAAAAAGACATCAAGCGGCAGACATTAATAGAGC
TTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTG
TTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAG
TATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATT
TGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAAT
TGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAG
AAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCA
TGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTG
AAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATG
GATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCAC
TTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAAT
TTGTGGAGAAGGATTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGC
CTATCACAAACAGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAG
CAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTT
GTTTGAGCAGCTCGCACTTTCAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATC
ATGTTGAGAACCTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCTTCCCTTCCT
TGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCC
GCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAG
AAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAG
AGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAA
CACCTCATCCACCATCTGGCTAG