Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc02g093620.1.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IJL3_POPTR)
Sequence	ATGCCTTATCTAAATGTCTGGTCTTCAAGAACAAACTGCCTTATCTCTGAACAAGACTTG GCTTCATCTTCTACTTCAGTTTTTACCTGGCGGAGAACTGAAAGTTGTGTCCTTGCATAC TCTCTCTCACATAATTTTACCTCTGATCATGTATCTATAAGGAATAAGCCTAAGTTTAGA AATCAAGATTTCTGTTTGAGAACAGAATCCGTTCCTTTTCGCCCCCAAAAGAAGGATTCT TTTGGCCCATCTTGTGCTTTGGCACAAGCCTCTGGAGAGAAAGATATTGATTGTGATATA GTAAAACAAAATTCACTATCTTTCACTAGTGGGGAGGGTGGGGTTGAGGGTTTCACTTGT GTTCAATTGGAAGAAAAGGGGGACTTAACTAATAATGTTGAGTATGATGATGTTGTAAGT GAGGAGGATGAGGCAGGGATAGTGAAAGGTGAGAAGGTGGACGTTCGAGCTCTGGCACAG AGCTTGCACTTTGTCAAAACTGCAGATGAGGTAGATGAAGTTCTTAAGGATAAGGTTGAA TTGCCCCTTCAAGTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAAC TCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCT ATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAG TATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTT GTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTC AAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACT GCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAG ACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGAT GAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGG CTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGG GCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGAA GAACATTATGTTGTAGCAAAAGAACTGTATAATAGGATAAGAGAGAGGGATACAGATATT AGCCTATCCGTTTGCAACCATATTATTTGGTTGATGGGTAAGGCGAAAAAATGGTGGGCA GCTCTTGAAATTTATGAGGATTTGTTGGATAAGGGGCCTCAACCAAACAACATGTCATAT GAACTGATAGTTTCTCATTTTAACATACTGCTGAGTGCAGCCAGAAAGAGAGGTATTTGG CGATGGGGTGTTAGGTTGCTGAATAAAATGGAAGAGAAGGGGCTTAAACCAAGCAGTAGG GAATGGAATGCCGTTCTTGTTGCCTGTTCCAAGGCTTCAGAAACATCTGCTGCAGTGCAG ATATTTAGGAGAATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTG CTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATG ATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACT GCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTT GAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAA AGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTA AGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAG TTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTC ATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCA CCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCC GATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAA GGAACATGA

Peptide Sequence

PEP ID	Solyc02g093620.1.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IJL3_POPTR)
Sequence	MPYLNVWSSRTNCLISEQDLASSSTSVFTWRRTESCVLAYSLSHNFTSDHVSIRNKPKFR NQDFCLRTESVPFRPQKKDSFGPSCALAQASGEKDIDCDIVKQNSLSFTSGEGGVEGFTC VQLEEKGDLTNNVEYDDVVSEEDEAGIVKGEKVDVRALAQSLHFVKTADEVDEVLKDKVE LPLQVYSSMIRGFGKDKKLNSAMALVEWLRRRRGKDNIGSISLNVFIYNSLLGAIKEAGK YDFVDKVMDDMVSEGVQPNVVTYNTLMRTYIEQGRELEALKLFREMPKKGLTPSPASYST ALFAYRRLEDGFGAITFFVETRERYQNGEIGNIEEENWEDEFAKLENFIVRICYQVMRQW LVKGENANTNVLKLLTDMDRARLQLSRAEYERLVWACTREEHYVVAKELYNRIRERDTDI SLSVCNHIIWLMGKAKKWWAALEIYEDLLDKGPQPNNMSYELIVSHFNILLSAARKRGIW RWGVRLLNKMEEKGLKPSSREWNAVLVACSKASETSAAVQIFRRMVEKGEKPTVISYGAL LSALEKGKLYDEALQVWKHMIKVGIEPNLYAYTIMASIYTAQGKFNIVDSIIKEMVTTGV EPTVVTFNAIISGCARNGMESVAYEWFQRMKTQNITPNEVSYEVLIEALANDGKPRLAYE LYVRALTEGLSLSTKAYDAVISSTQAYGASIDLSILGPRPPEKKKRVQIRKSLSEFCHIA DVPRRSRPFDREEIFTAQTKGT*

Transcript Sequence

Transcript ID	Solyc02g093620.1.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IJL3_POPTR)
Sequence	ATGCCTTATCTAAATGTCTGGTCTTCAAGAACAAACTGCCTTATCTCTGAACAAGACTTG GCTTCATCTTCTACTTCAGTTTTTACCTGGCGGAGAACTGAAAGTTGTGTCCTTGCATAC TCTCTCTCACATAATTTTACCTCTGATCATGTATCTATAAGGAATAAGCCTAAGTTTAGA AATCAAGATTTCTGTTTGAGAACAGAATCCGTTCCTTTTCGCCCCCAAAAGAAGGATTCT TTTGGCCCATCTTGTGCTTTGGCACAAGCCTCTGGAGAGAAAGATATTGATTGTGATATA GTAAAACAAAATTCACTATCTTTCACTAGTGGGGAGGGTGGGGTTGAGGGTTTCACTTGT GTTCAATTGGAAGAAAAGGGGGACTTAACTAATAATGTTGAGTATGATGATGTTGTAAGT GAGGAGGATGAGGCAGGGATAGTGAAAGGTGAGAAGGTGGACGTTCGAGCTCTGGCACAG AGCTTGCACTTTGTCAAAACTGCAGATGAGGTAGATGAAGTTCTTAAGGATAAGGTTGAA TTGCCCCTTCAAGTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAAC TCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGACAATATTGGCTCT ATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAG TATGATTTTGTTGATAAAGTCATGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTT GTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCTCTC AAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACT GCCTTGTTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAG ACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGAT GAATTTGCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGG CTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGG GCTAGGCTCCAACTAAGTCGTGCAGAATATGAACGTCTGGTGTGGGCCTGTACTCGTGAA GAACATTATGTTGTAGCAAAAGAACTGTATAATAGGATAAGAGAGAGGGATACAGATATT AGCCTATCCGTTTGCAACCATATTATTTGGTTGATGGGTAAGGCGAAAAAATGGTGGGCA GCTCTTGAAATTTATGAGGATTTGTTGGATAAGGGGCCTCAACCAAACAACATGTCATAT GAACTGATAGTTTCTCATTTTAACATACTGCTGAGTGCAGCCAGAAAGAGAGGTATTTGG CGATGGGGTGTTAGGTTGCTGAATAAAATGGAAGAGAAGGGGCTTAAACCAAGCAGTAGG GAATGGAATGCCGTTCTTGTTGCCTGTTCCAAGGCTTCAGAAACATCTGCTGCAGTGCAG ATATTTAGGAGAATGGTAGAGAAAGGTGAAAAACCTACAGTTATATCCTATGGAGCGTTG CTCAGTGCTCTAGAAAAAGGCAAGCTCTATGATGAAGCTCTTCAGGTTTGGAAACATATG ATCAAAGTGGGGATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACT GCTCAAGGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTT GAGCCTACAGTTGTTACATTCAACGCTATTATTAGTGGATGTGCTCGGAATGGTATGGAA AGTGTTGCATACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCGAATGAGGTA AGCTATGAAGTGCTAATTGAGGCTCTTGCCAATGATGGCAAGCCGAGGCTAGCATATGAG TTGTATGTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTC ATCTCATCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCA CCAGAAAAAAAGAAACGAGTGCAAATCAGGAAAAGTTTGTCTGAATTCTGTCATATAGCC GATGTTCCCAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAAA GGAACATGA